Difference between revisions of "Team:NCTU Formosa/Notebook"

Line 539: Line 539:
 
<td >
 
<td >
 
                             <B>15</B><br><br>
 
                             <B>15</B><br><br>
Transformation of <br>GBP[FadL-GBP]<br>
+
<b>Transformation of</b><br>GBP[FadL-GBP]<br>
 
Cultivation of <br>OmpA[OmpA+pSB1K3] K<sup>r</sup>
 
Cultivation of <br>OmpA[OmpA+pSB1K3] K<sup>r</sup>
 
                         </td>
 
                         </td>
Line 546: Line 546:
 
Cultivation of <br>GBP[FadL-GBP]
 
Cultivation of <br>GBP[FadL-GBP]
 
<br>
 
<br>
Plasmid purification of <br>OmpA[OmpA+pSB1K3] K<sup>r</sup>
+
<b>Plasmid purification of</b><br>OmpA[OmpA+pSB1K3] K<sup>r</sup>
 
<br>
 
<br>
Digestion of <br>OmpA[OmpA+pSB1K3] K<sup>r</sup> (EcoRI and PstI)
+
<b>Digestion of</b><br>OmpA[OmpA+pSB1K3] K<sup>r</sup> (EcoRI and PstI)
  
 
                         </td>
 
                         </td>
 
                         <td>
 
                         <td>
                             <B>17</B><br><br>Plasmid purification of
+
                             <B>17</B><br><br><b>Plasmid purification of</b>
 
<br>GBP[FadL-GBP]  
 
<br>GBP[FadL-GBP]  
 
<br>
 
<br>
Digestion of
+
<b>Digestion of</b>
 
<br>GBP[FadL-GBP]  (EcoRI and PstI)
 
<br>GBP[FadL-GBP]  (EcoRI and PstI)
 
<br>
 
<br>
Electrophoresis of digested product:
+
<b>Electrophoresis of</b><br>digested product:
 
<br>GBP[FadL-GBP]  (EcoRI and PstI)
 
<br>GBP[FadL-GBP]  (EcoRI and PstI)
  
Line 564: Line 564:
 
<td >
 
<td >
 
                           <B>18</B><br><br>
 
                           <B>18</B><br><br>
  Transformation of ligated product:  
+
  <b>Transformation of</b><br>ligated product:  
 
<br>GBP[FadL-GBP+pSB1C3] C<sup>r</sup>
 
<br>GBP[FadL-GBP+pSB1C3] C<sup>r</sup>
  
Line 572: Line 572:
 
                         <td >
 
                         <td >
 
                             <B>19</B><br><br>
 
                             <B>19</B><br><br>
Cultivation of  
+
<b>Cultivation of</b>
 
<br>ligated product: GBP[FadL-GBP] C<sup>r</sup>  
 
<br>ligated product: GBP[FadL-GBP] C<sup>r</sup>  
 
<br>PCR product: Terminator[J61048]
 
<br>PCR product: Terminator[J61048]
Line 582: Line 582:
 
                         <td>
 
                         <td>
 
                             <B>21</B><br><br>
 
                             <B>21</B><br><br>
Cultivation of
+
<b>Cultivation of</b>
 
<br>GFP[J23101+B0034+E0040+J61048+pSB1A3] A<sup>r</sup>
 
<br>GFP[J23101+B0034+E0040+J61048+pSB1A3] A<sup>r</sup>
 
<br>OmpA[OmpA+pSB1C3] C<sup>r</sup>
 
<br>OmpA[OmpA+pSB1C3] C<sup>r</sup>
Line 590: Line 590:
 
<td >
 
<td >
 
                             <B>22</B><br><br>
 
                             <B>22</B><br><br>
Plasmid purification of  
+
<b>Plasmid purification of</b>
 
<br>GFP[J23101+B0034+E0040+J61048+pSB1A3] A<sup>r</sup>
 
<br>GFP[J23101+B0034+E0040+J61048+pSB1A3] A<sup>r</sup>
 
<br>OmpA[OmpA+pSB1C3] C<sup>r</sup>
 
<br>OmpA[OmpA+pSB1C3] C<sup>r</sup>
 
<br>GBP[FadL-GBP+PSB1C3] C<sup>r</sup>
 
<br>GBP[FadL-GBP+PSB1C3] C<sup>r</sup>
 
<br>
 
<br>
Digestion of  
+
<b>Digestion of</b>
 
<br>GFP[J23101+B0034+E0040+J61048] A<sup>r</sup> (EcoRI and PstI)
 
<br>GFP[J23101+B0034+E0040+J61048] A<sup>r</sup> (EcoRI and PstI)
 
<br>OmpA[OmpA] C<sup>r</sup> (EcoRI and PstI)
 
<br>OmpA[OmpA] C<sup>r</sup> (EcoRI and PstI)
 
<br>GBP[FadL-GBP] C<sup>r</sup> (EcoRI and PstI)
 
<br>GBP[FadL-GBP] C<sup>r</sup> (EcoRI and PstI)
 
<br>
 
<br>
Electrophoresis of digested product:  
+
<b>Electrophoresis of</b><br>digested product:  
 
<br>GFP[J23101+B0034+E0040+J61048] A<sup>r</sup> (EcoRI and PstI)
 
<br>GFP[J23101+B0034+E0040+J61048] A<sup>r</sup> (EcoRI and PstI)
 
<br>OmpA[OmpA] C<sup>r</sup> (EcoRI and PstI)
 
<br>OmpA[OmpA] C<sup>r</sup> (EcoRI and PstI)
Line 608: Line 608:
 
                         <td>
 
                         <td>
 
                             <B>23</B><br><br>
 
                             <B>23</B><br><br>
Digestion of
+
<b>Digestion of</b>
 
OmpA[OmpA] C<sup>r</sup> (EcoRI and SpeI)
 
OmpA[OmpA] C<sup>r</sup> (EcoRI and SpeI)
 
<br>GBP[FadL-GBP] C<sup>r</sup> (EcoRI and SpeI)
 
<br>GBP[FadL-GBP] C<sup>r</sup> (EcoRI and SpeI)
 
<br>
 
<br>
Electrophoresis of digested product:
+
<b>Electrophoresis of</b><br>digested product:
 
<br>OmpA[OmpA] C<sup>r</sup> (EcoRI and SpeI)
 
<br>OmpA[OmpA] C<sup>r</sup> (EcoRI and SpeI)
 
<br>GBP[FadL-GBP] C<sup>r</sup> (EcoRI and SpeI)
 
<br>GBP[FadL-GBP] C<sup>r</sup> (EcoRI and SpeI)
Line 619: Line 619:
 
                         <td>
 
                         <td>
 
                             <B>24</B><br><br>
 
                             <B>24</B><br><br>
Digestion of
+
<b>Digestion of</b>
 
<br>OmpA[OmpA] C<sup>r</sup> (XbaI and PstI)
 
<br>OmpA[OmpA] C<sup>r</sup> (XbaI and PstI)
 
<br>GBP[FadL-GBP] C<sup>r</sup> (XbaI and PstI)
 
<br>GBP[FadL-GBP] C<sup>r</sup> (XbaI and PstI)
Line 627: Line 627:
 
<td >
 
<td >
 
                             <B>25</B><br><br>
 
                             <B>25</B><br><br>
Electrophoresis of digested product:
+
<b>Electrophoresis of</b><br>digested product:
 
<br>OmpA[OmpA] C<sup>r</sup> (XbaI and PstI)
 
<br>OmpA[OmpA] C<sup>r</sup> (XbaI and PstI)
 
<br>GBP[FadL-GBP] C<sup>r</sup> (XbaI and PstI)
 
<br>GBP[FadL-GBP] C<sup>r</sup> (XbaI and PstI)
 
<br>
 
<br>
Digestion of
+
<b>Digestion of</b>
 
<br>RBS[B0034] A<sup>r</sup> (XbaI and PstI)
 
<br>RBS[B0034] A<sup>r</sup> (XbaI and PstI)
 
<br>backbone[pSB1A3] A<sup>r</sup> (EcoRI and PstI)
 
<br>backbone[pSB1A3] A<sup>r</sup> (EcoRI and PstI)
 
<br>Terminator[J61048] A<sup>r</sup> (XbaI and PstI)
 
<br>Terminator[J61048] A<sup>r</sup> (XbaI and PstI)
 
<br>
 
<br>
Electrophoresis of digested product:
+
<b>Electrophoresis of</b><br>digested product:
 
<br>RBS[B0034] A<sup>r</sup> (XbaI and PstI)
 
<br>RBS[B0034] A<sup>r</sup> (XbaI and PstI)
 
<br>backbone[pSB1A3] A<sup>r</sup> (EcoRI and PstI)
 
<br>backbone[pSB1A3] A<sup>r</sup> (EcoRI and PstI)
 
<br>Terminator[J61048] A<sup>r</sup> (XbaI and PstI)
 
<br>Terminator[J61048] A<sup>r</sup> (XbaI and PstI)
 
<br>
 
<br>
Ligation of
+
<b>Ligation of</b>
 
<br>OmpA[J23101+B0034+OmpA+pSB1A3] A<sup>r</sup>
 
<br>OmpA[J23101+B0034+OmpA+pSB1A3] A<sup>r</sup>
 
<br>GBP[GBP+B0034+pSB1K3] K<sup>r</sup>
 
<br>GBP[GBP+B0034+pSB1K3] K<sup>r</sup>
Line 651: Line 651:
 
                         <td >
 
                         <td >
 
                             <B>26</B><br><br>
 
                             <B>26</B><br><br>
Ligation of
+
<b>Ligation of</b>
 
<br>RFP[E1010+B0034+pSB1K3] K<sup>r</sup>  
 
<br>RFP[E1010+B0034+pSB1K3] K<sup>r</sup>  
 
<br>
 
<br>
Transformation of ligated product:
+
<b>Transformation</b><br>of ligated product:
 
<br>OmpA[J23101+B0034+OmpA+pSB1A3] A<sup>r</sup>
 
<br>OmpA[J23101+B0034+OmpA+pSB1A3] A<sup>r</sup>
 
<br>GBP[FadL-GBP+B0034+pSB1K3] K<sup>r</sup>
 
<br>GBP[FadL-GBP+B0034+pSB1K3] K<sup>r</sup>
 
<br>OmpA[OmpA+J61048+pSB1K3] K<sup>r</sup>
 
<br>OmpA[OmpA+J61048+pSB1K3] K<sup>r</sup>
 
<br>
 
<br>
Electrophoresis of digested product:
+
<b>Electrophoresis of</b><br>digested product:
 
<br>RFP[E1010+J61048+pSB1K3] K<sup>r</sup>  
 
<br>RFP[E1010+J61048+pSB1K3] K<sup>r</sup>  
 
<br>[J23101+B0034]  
 
<br>[J23101+B0034]  
Line 666: Line 666:
 
                         <td>
 
                         <td>
 
                           <B>27</B><br><br>
 
                           <B>27</B><br><br>
  Digestion of
+
  <b>Digestion of</b>
 
<br>Terminator[J61048] A<sup>r</sup> (XbaI and PstI)
 
<br>Terminator[J61048] A<sup>r</sup> (XbaI and PstI)
 
<br>
 
<br>
PCR of ligated product:
+
<b>PCR of</b><br>ligated product:
 
<br>OmpA[J23101+B0034+OmpA+pSB1A3] A<sup>r</sup>
 
<br>OmpA[J23101+B0034+OmpA+pSB1A3] A<sup>r</sup>
 
<br>OmpA[OmpA+J61048+pSB1K3] K<sup>r</sup>
 
<br>OmpA[OmpA+J61048+pSB1K3] K<sup>r</sup>
Line 676: Line 676:
 
                         <td>
 
                         <td>
 
                             <B>28</B><br><br>
 
                             <B>28</B><br><br>
Electrophoresis of
+
<b>Electrophoresis of</b>
 
<br>RFP[E1010+J61048+pSB1K3] K<sup>r</sup>  
 
<br>RFP[E1010+J61048+pSB1K3] K<sup>r</sup>  
 
<br>OmpA[J23101+B0034+OmpA+pSB1A3] A<sup>r</sup>
 
<br>OmpA[J23101+B0034+OmpA+pSB1A3] A<sup>r</sup>
  
Transformation of ligated product:
+
<b>Transformation of</b><br>ligated product:
 
<br>GBP[B0034+FadL-GBP+pSB1A3] A<sup>r</sup>
 
<br>GBP[B0034+FadL-GBP+pSB1A3] A<sup>r</sup>
 
<br>OmpA[OmpA+J61048+pSB1K3] K<sup>r</sup>
 
<br>OmpA[OmpA+J61048+pSB1K3] K<sup>r</sup>
  
PCR of ligated product
+
<b>PCR of</b><br>ligated product
 
<br>OmpA[J23101+B0034+OmpA] A<sup>r</sup>
 
<br>OmpA[J23101+B0034+OmpA] A<sup>r</sup>
  
Line 690: Line 690:
 
<td >
 
<td >
 
                             <B>29</B><br><br>
 
                             <B>29</B><br><br>
Cultivation of
+
<b>Cultivation of</b>
 
<br>RFP[E1010+J61048+pSB1K3] K<sup>r</sup>  
 
<br>RFP[E1010+J61048+pSB1K3] K<sup>r</sup>  
  
PCR of
+
<b>PCR of</b>
 
<br>OmpA[J23101+B0034+OmpA] A<sup>r</sup>
 
<br>OmpA[J23101+B0034+OmpA] A<sup>r</sup>
  
<br>Electrophoresis of
+
<br><b>Electrophoresis of</b>
 
<br>OmpA[J23101+B0034+OmpA] A<sup>r</sup>
 
<br>OmpA[J23101+B0034+OmpA] A<sup>r</sup>
  
  
Ligation of
+
<b>Ligation of</b>
 
<br>GBP[FadL-GBP+J61048+pSB1K3] K<sup>r</sup>
 
<br>GBP[FadL-GBP+J61048+pSB1K3] K<sup>r</sup>
  
Line 706: Line 706:
 
                         <td>
 
                         <td>
 
                             <B>30</B><br><br>
 
                             <B>30</B><br><br>
  Plasmid purification of
+
  <b>Plasmid purification of</b>
 
<br>RFP[E1010+J61048+pSB1K3] K<sup>r</sup>
 
<br>RFP[E1010+J61048+pSB1K3] K<sup>r</sup>
  
Ligation of
+
<b>Ligation of</b>
 
<br>OmpA[J23101+B0034+OmpA] A<sup>r</sup>
 
<br>OmpA[J23101+B0034+OmpA] A<sup>r</sup>
  
PCR of
+
<b>PCR of</b>
 
<br>OmpA[J23101+B0034+OmpA] A<sup>r</sup>
 
<br>OmpA[J23101+B0034+OmpA] A<sup>r</sup>
  
Transformation of  
+
<b>Transformation of</b>
 
<br>mini: Terminator[J61048]
 
<br>mini: Terminator[J61048]
 
<br>ligated product: OmpA[J23101+B0034+OmpA] A<sup>r</sup>
 
<br>ligated product: OmpA[J23101+B0034+OmpA] A<sup>r</sup>

Revision as of 08:06, 14 September 2015

Lab note
Sun. Mon. Tue. Wed. Thu. Fri. Set.
1

PCR
transform
2

3

4

5

6

7

8

8

10

11

12

13

14

15

16

17

18

19

20

21

22

23

24

25

26

27

28

29

30

31

Sun. Mon. Tue. Wed. Thu. Fri. Set.
1

2

3

4

5

6

7

8

9

10

11

12

13

14

15

Transformation of
GBP[FadL-GBP]
Cultivation of
OmpA[OmpA+pSB1K3] Kr
16

Cultivation of
GBP[FadL-GBP]
Plasmid purification of
OmpA[OmpA+pSB1K3] Kr
Digestion of
OmpA[OmpA+pSB1K3] Kr (EcoRI and PstI)
17

Plasmid purification of
GBP[FadL-GBP]
Digestion of
GBP[FadL-GBP] (EcoRI and PstI)
Electrophoresis of
digested product:
GBP[FadL-GBP] (EcoRI and PstI)
18

Transformation of
ligated product:
GBP[FadL-GBP+pSB1C3] Cr
19

Cultivation of
ligated product: GBP[FadL-GBP] Cr
PCR product: Terminator[J61048]
20

21

Cultivation of
GFP[J23101+B0034+E0040+J61048+pSB1A3] Ar
OmpA[OmpA+pSB1C3] Cr
GBP[FadL-GBP+pSB1C3] Cr
22

Plasmid purification of
GFP[J23101+B0034+E0040+J61048+pSB1A3] Ar
OmpA[OmpA+pSB1C3] Cr
GBP[FadL-GBP+PSB1C3] Cr
Digestion of
GFP[J23101+B0034+E0040+J61048] Ar (EcoRI and PstI)
OmpA[OmpA] Cr (EcoRI and PstI)
GBP[FadL-GBP] Cr (EcoRI and PstI)
Electrophoresis of
digested product:
GFP[J23101+B0034+E0040+J61048] Ar (EcoRI and PstI)
OmpA[OmpA] Cr (EcoRI and PstI)
GBP[FadL-GBP] Cr (EcoRI and PstI)
23

Digestion of OmpA[OmpA] Cr (EcoRI and SpeI)
GBP[FadL-GBP] Cr (EcoRI and SpeI)
Electrophoresis of
digested product:
OmpA[OmpA] Cr (EcoRI and SpeI)
GBP[FadL-GBP] Cr (EcoRI and SpeI)
24

Digestion of
OmpA[OmpA] Cr (XbaI and PstI)
GBP[FadL-GBP] Cr (XbaI and PstI)
25

Electrophoresis of
digested product:
OmpA[OmpA] Cr (XbaI and PstI)
GBP[FadL-GBP] Cr (XbaI and PstI)
Digestion of
RBS[B0034] Ar (XbaI and PstI)
backbone[pSB1A3] Ar (EcoRI and PstI)
Terminator[J61048] Ar (XbaI and PstI)
Electrophoresis of
digested product:
RBS[B0034] Ar (XbaI and PstI)
backbone[pSB1A3] Ar (EcoRI and PstI)
Terminator[J61048] Ar (XbaI and PstI)
Ligation of
OmpA[J23101+B0034+OmpA+pSB1A3] Ar
GBP[GBP+B0034+pSB1K3] Kr
OmpA[OmpA+J61048+pSB1K3] Kr
26

Ligation of
RFP[E1010+B0034+pSB1K3] Kr
Transformation
of ligated product:
OmpA[J23101+B0034+OmpA+pSB1A3] Ar
GBP[FadL-GBP+B0034+pSB1K3] Kr
OmpA[OmpA+J61048+pSB1K3] Kr
Electrophoresis of
digested product:
RFP[E1010+J61048+pSB1K3] Kr
[J23101+B0034]
27

Digestion of
Terminator[J61048] Ar (XbaI and PstI)
PCR of
ligated product:
OmpA[J23101+B0034+OmpA+pSB1A3] Ar
OmpA[OmpA+J61048+pSB1K3] Kr
28

Electrophoresis of
RFP[E1010+J61048+pSB1K3] Kr
OmpA[J23101+B0034+OmpA+pSB1A3] Ar Transformation of
ligated product:
GBP[B0034+FadL-GBP+pSB1A3] Ar
OmpA[OmpA+J61048+pSB1K3] Kr PCR of
ligated product
OmpA[J23101+B0034+OmpA] Ar
29

Cultivation of
RFP[E1010+J61048+pSB1K3] Kr PCR of
OmpA[J23101+B0034+OmpA] Ar
Electrophoresis of
OmpA[J23101+B0034+OmpA] Ar Ligation of
GBP[FadL-GBP+J61048+pSB1K3] Kr
30

Plasmid purification of
RFP[E1010+J61048+pSB1K3] Kr Ligation of
OmpA[J23101+B0034+OmpA] Ar PCR of
OmpA[J23101+B0034+OmpA] Ar Transformation of
mini: Terminator[J61048]
ligated product: OmpA[J23101+B0034+OmpA] Ar
Sun. Mon. Tue. Wed. Thu. Fri. Set.
1

2

3

4

5

6

7

8

9

10

11

12

13

14

15

16

17

18

19

20

21

22

23

24

25

26

27

28

29

30

31

Sun. Mon. Tue. Wed. Thu. Fri. Set.
1

2

3

4

5

6

7

8

8

10

11

12

13

14

15

16

17

18

19

20

21

22

23

24

25

26

27

28

29

30

Sun. Mon. Tue. Wed. Thu. Fri. Set.
1

PCR
transform
2

3

4

5

6

7

8

9

10

11

12

13

14

15

16

17

18

19

20

21

22

23

24

25

26

27

28

29

30

31

Sun. Mon. Tue. Wed. Thu. Fri. Set.
1

PCR
transform
2

3

4

5

6

7

8

8

10

11

12

13

14

15

16

17

18

19

20

21

22

23

24

25

26

27

28

29

30

31

Sun. Mon. Tue. Wed. Thu. Fri. Set.
1

PCR
transform
2

3

4

5

6

7

8

9

10

11

12

13

14

15

16

17

18

19

20

21

22

23

24

25

26

27

28

29

30