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Revision as of 13:50, 28 July 2015

IGEM Bordeaux 2015


Attributions

Wiki support: Our wiki is based on Evry's 2014 wiki

Each team must clearly attribute work done by the student team members on this page. The team must distinguish work done by the students from work done by others, including the host labs, advisors, instructors, and individuals not on the team roster.You can have a project based on a previous team, or based on someone else's idea, as long as you state this fact very clearly and give credit for the original project. The Attribution requirement helps the judges know what you did yourselves and what you had help with. We don't mind if you get help with difficult or complex techniques, but you must report what work your team did and what work was done by others. For example, you might choose to work with an animal model during your project. Working with animals requires getting a license and applying far in advance to conduct certain experiments in many countries. This is difficult to achieve during the course of a summer, but much easier if you can work with a postdoc or PI who has the right licenses.

What should this page have? General Support Project support and advice Fundraising help and advice Lab support Difficult technique support Project advisor support Wiki support Presentation coaching Human Practices support Thanks and acknowledgements for all other people involved in helping make a successful iGEM team





Register for iGEM, have a great summer, and attend the Giant Jamboree.✔

Complete Judging form

Create a Team Wiki

Present a poster and a talk at the iGEM Jamboree

Create a page on your team wiki with clear attribution of each aspect of your project. This page must clearly attribute work done by the students and distinguish it from work done by others, including host labs, advisors, instructors, sponsors, professional website designers, artists, and commercial services.

Document at least one new standard BioBrick Part or Device central to your project and submit this part to the iGEM Registry (submissions must adhere to the iGEM Registry guidelines). You may also document a new application of a BioBrick part from a previous iGEM year, adding that documentation to the part main page.

In addition to the Bronze Medal requirements, your team must convince the judges you have achieved the following 3 goals:

Experimentally validate that at least one new BioBrick Part or Device of your own design and construction works as expected. Document the characterization of this part in the Main Page section of that Part’s/Device’s Registry entry. This working part must be different to the part documented in bronze medal criteria

Submit this new part to the iGEM Parts Registry. Your part must be different to the submission for Bronze medal criteria #6 (submissions must adhere to the iGEM Registry guidelines.

iGEM projects involve important questions beyond the bench, for example relating to (but not limited to) ethics, sustainability, social justice, safety, security, and intellectual property rights. Demonstrate how your team has identified, investigated and addressed one or more of these issues in the context of your project. Your activity could center around education, public engagement, public policy issues, public perception or other activities (See the human practices hub for more information and examples of previous teams exemplary work).

In addition to the Bronze and Silver Medal requirements, your team must convince the judges you have achieved at least two of the following goals:

iGEM projects involve important questions beyond the bench, for example relating to (but not limited to) ethics, sustainability, social justice, safety, security, and intellectual property rights. Expand on your silver medal activity by demonstrating how you have integrated the investigated issues into the design and/or execution of your project OR demonstrate an innovative human practices activity that relates to your project (this typically involves educational, public engagement, and/or public perception activities; see the human practices hub for information and examples of previous teams comprehensive and innovative activities).

Convince the judges you have helped any registered iGEM team from a high-school, different track, another university, or institution in a significant way by, for example, mentoring a new team, characterizing a part, debugging a construct, modeling/simulating their system or helping validate a software/hardware solution to a synbio problem.

Improve the function OR characterization of an previously existing BioBrick Part or Device (created by another team or your own institution in a previous year of the iGEM competition) and enter this information in the Registry. Please see the Registry help page on how to document a contribution to an existing part. This part must not come from your 2015 part range.

Demonstrate a functional prototype of your project. Your prototype can derive from a previous project (that was not demonstrated to work) by your team or by another team. Show this system working under real-world conditions (biological materials may not be taken outside the lab).




Next Page: Our Biobricks



IGEM Bordeaux 2015

Parts

Each team will make new parts during iGEM and will submit them to the Registry of Standard Biological Parts. The iGEM software provides an easy way to present the parts your team has created. The groupparts tag (see below) will generate a table with all of the parts that your team adds to your team sandbox. Remember that the goal of proper part documentation is to describe and define a part, so that it can be used without needing to refer to the primary literature. Registry users in future years should be able to read your documentation and be able to use the part successfully. Also, you should provide proper references to acknowledge previous authors and to provide for users who wish to know more.

Note that parts must be documented on the Registry. This page serves to showcase the parts you have made. Future teams and other users and are much more likely to find parts by looking in the Registry than by looking at your team wiki. You can add parts to the Registry at our Add a Part to the Registry link. We encourage teams to start completing documentation for their parts on the Registry as soon as you have it available. The sooner you put up your parts, the better you will remember all the details about your parts. Remember, you don't need to send us the DNA sample before you create an entry for a part on the Registry. (However, you do need to send us the DNA sample before the Jamboree. If you don't send us a DNA sample of a part, that part will not be eligible for awards and medal criteria.)

The information needed to initially create a part on the Registry is: Part Name Part type Creator Sequence Short Description (60 characters on what the DNA does) Long Description (Longer description of what the DNA does) Design considerations We encourage you to put up much more information as you gather it over the summer. If you have images, plots, characterization data and other information, please also put it up on the part page.


Design

By talking about your design work on this page, there is one medal criterion that you can attempt to meet, and one award that you can apply for. If your team is going for a gold medal by building a functional prototype, you should tell us what you did on this page. If you are going for the Applied Design award, you should also complete this page and tell us what you did. In order to be considered for the Best Applied Design award and/or the functional prototype gold medal criterion, you must fill out this page. This is a prize for the team that has developed a synthetic biology product to solve a real world problem in the most elegant way. The students will have considered how well the product addresses the problem versus other potential solutions, how the product integrates or disrupts other products and processes, and how its lifecycle can more broadly impact our lives and environments in positive and negative ways. If you are working on art and design as your main project, please join the art and design track. If you are integrating art and design into the core of your main project, please apply for the award by completing this page.

Protocols

Our Organisms of Choice is Escherichia coli and Saccharomyces cerevisiae . Listed below are the protocols we used in our lab.

Cloning
Working with E.coli
Working with S.cerevisiae
Curdlan Methods