Difference between revisions of "Template:Heidelberg/pages/results"

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                                 <div class="row">
 
<ul>
 
<ul>
<li><p class="basictext">Fast and cheap</p></li>
+
<li><p class="basictext">Fast and cheap alternative to Antibodies</p></li>
  
 
<li><p class="basictext">MAWS can generate specific AptaBodies against each and every protein of interest</p></li>
 
<li><p class="basictext">MAWS can generate specific AptaBodies against each and every protein of interest</p></li>
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<div class="panel panel‐default" style="min-height:100px;">
 
<div class="panel panel‐default" style="min-height:100px;">
 
                             <div id="RTSMS" class="panel‐heading">
 
                             <div id="RTSMS" class="panel‐heading">
                           <p class="basicheader"> Real-time Small molecule sensing </p>
+
                           <p class="basicheader" style="margin-left:-10px;"> Real-time Small molecule sensing </p>
 
                             </div>
 
                             </div>
 
                             <!-- panel-heading -->
 
                             <!-- panel-heading -->
 
                             <div class="panel‐body">
 
                             <div class="panel‐body">
 
                                 <div class="row">
 
                                 <div class="row">
 +
<ul>
 +
<li><p class="basictext">Validation of our JAWS Software </p></li>
  
<p class="basictext">Validation of our JAWS Software </p>
+
<li><p class="basictext">Sensing of ATP concentrations in biochemical reactions </p></li>
 
+
<p class="basictext">Sensing of ATP concentrations in biochemical reactions </p>
+
 
+
<p class="basictext">Real time monitoring of in vitro transcriptions</p>
+
  
 +
<li><p class="basictext">Real time monitoring of in vitro transcriptions</p></li>
 +
</ul>
 
</div>
 
</div>
 
</div>
 
</div>
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<div class="panel panel‐default" style="min-height:100px;">
 
<div class="panel panel‐default" style="min-height:100px;">
 
                             <div id="CF" class="panel‐heading">
 
                             <div id="CF" class="panel‐heading">
                           <p class="basicheader"> Cystic fibrosis </p>
+
                           <p class="basicheader" style="margin-left:-10px;"> Cystic fibrosis </p>
 
                             </div>
 
                             </div>
 
                             <!-- panel-heading -->
 
                             <!-- panel-heading -->
 
                             <div class="panel‐body">
 
                             <div class="panel‐body">
 
                                 <div class="row">
 
                                 <div class="row">
<p class="basictext">Functional proof of cleavage activity in vivo</p>
+
<ul>
 +
<li><p class="basictext">Functional proof of cleavage activity in vivo</p></li>
  
<p class="basictext">De novo construction of a new active site in twin ribozymes</p>
+
<li><p class="basictext">De novo construction of a new active site in twin ribozymes</p></li>
 
+
<p class="basictext">Proposeal of Ribozyme as therapeutic agent in Cystic fibrosis </p>
+
  
 +
<li><p class="basictext">Proposeal of Ribozyme as therapeutic agent in Cystic fibrosis </p></li>
 +
</ul>
 
</div>
 
</div>
 
</div>
 
</div>
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<div class="panel panel‐default" style="min-height:100px;">
 
<div class="panel panel‐default" style="min-height:100px;">
 
                             <div id="LandV" class="panel‐heading">
 
                             <div id="LandV" class="panel‐heading">
                           <p class="basicheader"> Labelling and vizualization </p>
+
                           <p class="basicheader" style="margin-left:-10px;"> Labelling and vizualization </p>
 
                             </div>
 
                             </div>
 
                             <!-- panel-heading -->
 
                             <!-- panel-heading -->
 
                             <div class="panel‐body">
 
                             <div class="panel‐body">
 
                                 <div class="row">
 
                                 <div class="row">
<p class="basictext">A novel strategy using mimicking HRP DNAzyme can be used for labeling of sDNA and RNA</p>
+
<ul>
 
+
<li><p class="basictext">A novel strategy using mimicking HRP DNAzyme can be used for labeling of sDNA and RNA</p></li>
 +
</ul>
 
</div>
 
</div>
 
</div>
 
</div>
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<div class="panel panel‐default" style="min-height:100px;">
 
<div class="panel panel‐default" style="min-height:100px;">
 
                             <div id="Modeling" class="panel‐heading">
 
                             <div id="Modeling" class="panel‐heading">
                           <p class="basicheader"> Modeling and Software validation  </p>
+
                           <p class="basicheader" style="margin-left:-10px;"> Modeling and Software validation  </p>
 
                             </div>
 
                             </div>
 
                             <!-- panel-heading -->
 
                             <!-- panel-heading -->
 
                             <div class="panel‐body">
 
                             <div class="panel‐body">
 
                                 <div class="row">
 
                                 <div class="row">
<p class="basictext">Fully automatable high-throughput workflow to screen aptamer and allosteric DNAzyme candidates</p>
+
<ul>
 +
<li><p class="basictext">Fully automatable high-throughput workflow to screen aptamer and allosteric DNAzyme candidates</p></li>
  
<p class="basictext">Our system is able to design aptamer candidates and give estimates for the affinity and switching behavior</p>
+
<li><p class="basictext">Our system is able to design aptamer candidates and give estimates for the affinity and switching behavior</p></li>
  
<p class="basictext">The aptamers created by our software were experimentally proven to work </p>
+
<li><p class="basictext">The aptamers created by our software were experimentally proven to work </p></li>
 
+
<p class="basictext">Establishment of a cleavage activated HRP-mimicking DNAzyme that can be applied in real life screening assays</p>
+
  
 +
<li><p class="basictext">Establishment of a cleavage activated HRP-mimicking DNAzyme that can be applied in real life screening assays</p></li>
 +
</ul>
 
</div>
 
</div>
 
</div>
 
</div>

Revision as of 19:01, 19 November 2015


Team is successfully registered!

Judging form is completed and submitted!

Project is showcased on the iGEM wiki!

Proper list attributions!

Part:BBa_K1614002 is documented and submitted!


Part:BBa_K1614016 successfully validated and documented!

Part:BBa_K1614016 submitted to the registry!

Spread knowledge about synthetic biology in the city of Heidelberg!


Held a panel discussion which was lifestreamed and simultaniously translated into English!

Cooperated with iGEM Michigan. We calculated aptamers for their setup using our MAWS software

Improved Part:BBa_K1614019 by making it switchable via ATP!

Demonstrated a functional prototype!

Developed a software in close contact with the wetlab work!

Optimised our software until it can be run fully functional in the timeframe the demo suite offers!

AptaBodies

  • Fast and cheap alternative to Antibodies

  • MAWS can generate specific AptaBodies against each and every protein of interest

  • Easy to design for proteins for which no antibodies are available yet

Real-time Small molecule sensing

  • Validation of our JAWS Software

  • Sensing of ATP concentrations in biochemical reactions

  • Real time monitoring of in vitro transcriptions

Cystic fibrosis

  • Functional proof of cleavage activity in vivo

  • De novo construction of a new active site in twin ribozymes

  • Proposeal of Ribozyme as therapeutic agent in Cystic fibrosis

Labelling and vizualization

  • A novel strategy using mimicking HRP DNAzyme can be used for labeling of sDNA and RNA

Modeling and Software validation

  • Fully automatable high-throughput workflow to screen aptamer and allosteric DNAzyme candidates

  • Our system is able to design aptamer candidates and give estimates for the affinity and switching behavior

  • The aptamers created by our software were experimentally proven to work

  • Establishment of a cleavage activated HRP-mimicking DNAzyme that can be applied in real life screening assays

Standardization

A novel Standard (RFC 110) is useful for cloning and expression of functional RNA.