Difference between revisions of "Team:Aachen/InteractiveTour31"

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{{Team:Aachen/Header}}
 
{{Team:Aachen/Header}}
 
<p class="headline" style="display:none;">Biological Approach</p>
 
<p class="headline" style="display:none;">Biological Approach</p>
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After it became clear that we wanted to enable ''Escherichia coli'' to convert methanol into glycogen we had to find a suitable pathway for methanol assimilation. We found the Methanol Condensation Cycle (MCC) to be the most promising one. For implementing the MCC in ''E. coli'', four additional genes are required:
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* methanol dehydrogenase 2 from ''Bacillus&nbsp;methanolicus'' (Mdh)
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* 3-hexulose-6-phosphate synthase from ''Bacillus&nbsp;methanolicus'' (Hps)
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* 6-phospho 3-hexuloisomerase from ''Bacillus&nbsp;methanolicus'' (Phi)
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* phosphoketolase from ''Bifidobacterium&nbsp;adolescentis'' (Xpk)
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In parallel we developed a strategy for our second module: glycogen accumulation. To enhance glycogen formation, the whole synthesis pathway needs to be upregulated. The three enzymes involved in synthesis are:
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* GlgC, ADP-glucose pyrophosphorylase
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* GlgA, the glycogen synthase
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* GlgB, the branching enzyme
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On top of that accumulation can be considerably increased by knocking out glycogen degradation enzymes. Those are GlgP, the glycogen phosphorylase and GlgX, the debranching enyzme.
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* MeOH zu glycogen
 
* needed to find a suitable pathway for meOH assimilation
 
* MCC, just 4 extra genes
 
* to enhance glycogen accumulation, synthesis genes overexpressed, knockout of degradation enzymes
 
  
 
{{Team:Aachen/Footer|color=green}}
 
{{Team:Aachen/Footer|color=green}}

Revision as of 22:04, 18 September 2015

After it became clear that we wanted to enable Escherichia coli to convert methanol into glycogen we had to find a suitable pathway for methanol assimilation. We found the Methanol Condensation Cycle (MCC) to be the most promising one. For implementing the MCC in E. coli, four additional genes are required:

  • methanol dehydrogenase 2 from Bacillus methanolicus (Mdh)
  • 3-hexulose-6-phosphate synthase from Bacillus methanolicus (Hps)
  • 6-phospho 3-hexuloisomerase from Bacillus methanolicus (Phi)
  • phosphoketolase from Bifidobacterium adolescentis (Xpk)

In parallel we developed a strategy for our second module: glycogen accumulation. To enhance glycogen formation, the whole synthesis pathway needs to be upregulated. The three enzymes involved in synthesis are:

  • GlgC, ADP-glucose pyrophosphorylase
  • GlgA, the glycogen synthase
  • GlgB, the branching enzyme

On top of that accumulation can be considerably increased by knocking out glycogen degradation enzymes. Those are GlgP, the glycogen phosphorylase and GlgX, the debranching enyzme.