Difference between revisions of "Team:Berlin"

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<h2> Welcome to iGEM 2015! </h2>
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<h2>iGEM.Berlin 2015</h2>
<p>Your team has been approved and you are ready to start the iGEM season! </p>
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<p>
 
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<h4>What is it about?</h4>
<h4>Before you start: </h4>
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This year’s iGEM project of the Berlin team is all about plastic - to be specific: microplastic and the clearance of our water with the aid of Synthetic Biology.<br/>
<p> Please read the following pages:</p>
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The idea is to build a modular filter system for wastewater treatment plants which is able to degrade plastic. Bakterial flagella, moleculare hair-like structures, are equipped with a combination of enzymes that are able to breakdown plastic molecules. <br/>
<ul>
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<br/>
<li>  <a href="https://2015.igem.org/Requirements">Requirements page </a> </li>
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<h4>Detailed Information:</h4>
<li> <a href="https://2015.igem.org/Wiki_How-To">Wiki Requirements page</a></li>
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Every year 280 million tons of additional plastic waste contaminate the oceans.<sup>[1]</sup><br/>
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Nowadays plastic is everywhere: it is not only used for the packaging of groceries but also in cosmetics, toothpaste and in many other everyday items.<br/>
 
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Flowing in the wastewater of our homes or in that of industrial processes microplastic finds its way into the wastewater treatment plant, where it cannot be filtered out sufficiently.<br/>
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After leaving the sewage plant with the treated water it is introduced into the environment.<br/>
<h4> Styling your wiki </h4>
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<br/>
<p>You may style this page as you like or you can simply leave the style as it is. You can easily keep the styling and edit the content of these default wiki pages with your project information and completely fulfill the requirement to document your project.</p>
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Animals and organisms living in lakes, rivers or the ocean take up plastic particles which can often lead to their death by mechanical injuries or obstruction of food intake and digestion.<br/>
<p>While you may not win Best Wiki with this styling, your team is still eligible for all other awards. This default wiki meets the requirements, it improves navigability and ease of use for visitors, and you should not feel it is necessary to style beyond what has been provided.</p>
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An average number of 35 plastic pieces was found in 95% of german kingfisher birds. <sup>[2]</sup><br/>
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The aim of the iGEM Team Berlin 2015 is to go about this complex problem by means of synthetic biology using natural products, which are produced by microorganisms, to design a molecular filtering machine – the Enzymatic Flagellulose.<br/>
<h4> Editing your wiki </h4>
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The filter consists of a surface made up of cellulose to which bacterial flagella will be immobilized, whereby the attachment will be achieved via a cellulose-binding domain. In our case, cellulose itself does not provide any functionality besides acting as a biocompatible carrier. The single flagella-subunits, also known as flagellin, will be interlinked with plastic degrading enzymes. Thus, this system enables an increased specific surface with highly catalytic activity. Microplastics will be decomposed into biodegradable units by the enzymes and will not constitute a threat to the environment anymore.<br/>
<p>On this page you can document your project, introduce your team members, document your progress and share your iGEM experience with the rest of the world! </p>
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The Enzymatic Flagellulose unit will be integrated within the secondary wastewater treatment, where biological oxidation takes place. That way, the release of microplastics into the environment, its distribution, and related environmental consequences can be prevented.<br/>
<p> <a href="https://2015.igem.org/wiki/index.php?title=Team:Berlin&action=edit"> Click here to edit this page! </a></p>
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Furthermore, our functionalized matrix can be expanded to other environmental problematic issues, such as removing medicine residues or pesticides, besides microplastics, from wastewater.<br/>
<p>See tips on how to edit your wiki on the <a href="https://2015.igem.org/TemplatesforTeams_Code_Documentation">Template Documentation</a> page.</p>  
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Thus, it offers a wide range of application possibilities. By varying and combining the interlinked enzymes of different functions it can be applied diversely and simultaneously for various purposes such as the degradation of drug residues in wastewater.<br/>
 
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<h4>Templates </h4>
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<p> This year we have created templates for teams to use freely. More information on how to use and edit the templates can be found on the
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<a href="https://2015.igem.org/TemplatesforTeams_Code_Documentation">Template Documentation </a> page.</p>  
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<h4>Tips</h4>
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<p>This wiki will be your team’s first interaction with the rest of the world, so here are a few tips to help you get started: </p>
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<li>State your accomplishments! Tell people what you have achieved from the start. </li>
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<li>Be clear about what you are doing and how you plan to do this.</li>
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<li>You have a global audience! Consider the different backgrounds that your users come from.</li>
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<li>Make sure information is easy to find; nothing should be more than 3 clicks away. </li>
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<li>Avoid using very small fonts and low contrast colors; information should be easy to read. </li>
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<li>Start documenting your project as early as possible; don’t leave anything to the last minute before the Wiki Freeze. For a complete list of deadlines visit the <a href="https://2015.igem.org/Calendar_of_Events">iGEM 2015 calendar</a> </li>
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<li>Have lots of fun! </li>
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</ul>  
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<h4>Inspiration</h4>
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<p> You can also view other team wikis for inspiration! Here are some examples:</p>
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<ul>
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<li> <a href="https://2014.igem.org/Team:SDU-Denmark/"> 2014 SDU Denmark </a> </li>
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<li> <a href="https://2014.igem.org/Team:Aalto-Helsinki">2014 Aalto-Helsinki</a> </li>
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<li> <a href="https://2014.igem.org/Team:LMU-Munich">2014 LMU-Munich</a> </li>
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<li> <a href="https://2014.igem.org/Team:Michigan"> 2014 Michigan</a></li>
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<li> <a href="https://2014.igem.org/Team:ITESM-Guadalajara">2014 ITESM-Guadalajara </a></li>
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<li> <a href="https://2014.igem.org/Team:SCU-China"> 2014 SCU-China </a></li>
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</ul>
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<h4> Uploading pictures and files </h4>
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<p> You can upload your pictures and files to the iGEM 2015 server. Remember to keep all your pictures and files within your team's namespace or at least include your team's name in the file name. <br />
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When you upload, set the "Destination Filename" to <code>Team:YourOfficialTeamName/NameOfFile.jpg</code>. (If you don't do this, someone else might upload a different file with the same "Destination Filename", and your file would be erased!)</p>
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<a href="https://2015.igem.org/Special:Upload">CLICK HERE TO UPLOAD FILES</a>
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<sup>[1]</sup> Allsopp, M., Walters, A. et al: Plastic debris in the world’s oceans, Greenpeace Report 2006, 1–43<br/>
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<sup>[2]</sup> <a href="https://www.nabu.de/natur-und-landschaft/meere/muellkippe-meer/muellkippemeer.html" target="blank"> https://www.nabu.de/natur-und-landschaft/meere/muellkippe-meer/muellkippemeer.html,</a> Zugang 04.04.2015<br/>
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Revision as of 18:49, 14 July 2015

iGEM.Berlin 2015

What is it about?


This year’s iGEM project of the Berlin team is all about plastic - to be specific: microplastic and the clearance of our water with the aid of Synthetic Biology.
The idea is to build a modular filter system for wastewater treatment plants which is able to degrade plastic. Bakterial flagella, moleculare hair-like structures, are equipped with a combination of enzymes that are able to breakdown plastic molecules.

Detailed Information:

Every year 280 million tons of additional plastic waste contaminate the oceans.[1]
Nowadays plastic is everywhere: it is not only used for the packaging of groceries but also in cosmetics, toothpaste and in many other everyday items.
Flowing in the wastewater of our homes or in that of industrial processes microplastic finds its way into the wastewater treatment plant, where it cannot be filtered out sufficiently.
After leaving the sewage plant with the treated water it is introduced into the environment.

Animals and organisms living in lakes, rivers or the ocean take up plastic particles which can often lead to their death by mechanical injuries or obstruction of food intake and digestion.
An average number of 35 plastic pieces was found in 95% of german kingfisher birds. [2]

The aim of the iGEM Team Berlin 2015 is to go about this complex problem by means of synthetic biology using natural products, which are produced by microorganisms, to design a molecular filtering machine – the Enzymatic Flagellulose.
The filter consists of a surface made up of cellulose to which bacterial flagella will be immobilized, whereby the attachment will be achieved via a cellulose-binding domain. In our case, cellulose itself does not provide any functionality besides acting as a biocompatible carrier. The single flagella-subunits, also known as flagellin, will be interlinked with plastic degrading enzymes. Thus, this system enables an increased specific surface with highly catalytic activity. Microplastics will be decomposed into biodegradable units by the enzymes and will not constitute a threat to the environment anymore.
The Enzymatic Flagellulose unit will be integrated within the secondary wastewater treatment, where biological oxidation takes place. That way, the release of microplastics into the environment, its distribution, and related environmental consequences can be prevented.
Furthermore, our functionalized matrix can be expanded to other environmental problematic issues, such as removing medicine residues or pesticides, besides microplastics, from wastewater.
Thus, it offers a wide range of application possibilities. By varying and combining the interlinked enzymes of different functions it can be applied diversely and simultaneously for various purposes such as the degradation of drug residues in wastewater.

[1] Allsopp, M., Walters, A. et al: Plastic debris in the world’s oceans, Greenpeace Report 2006, 1–43
[2] https://www.nabu.de/natur-und-landschaft/meere/muellkippe-meer/muellkippemeer.html, Zugang 04.04.2015