Difference between revisions of "Team:NEFU China/Safety"

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<h2>Safety in iGEM</h2>
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<p>Please visit <a href="https://2015.igem.org/Safety">the main Safety page</a> to find this year's safety requirements & deadlines, and to learn about safe & responsible research in iGEM.</p>
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<p>On this page of your wiki, you should write about how you are addressing any safety issues in your project. The wiki is a place where you can <strong>go beyond the questions on the safety forms</strong>, and write about whatever safety topics are most interesting in your project. (You do not need to copy your safety forms onto this wiki page.)</p>
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<h4>Safe Project Design</h4>
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<p>Does your project include any safety features? Have you made certain decisions about the design to reduce risks? Write about them here! For example:</p>
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<li>Choosing a non-pathogenic chassis</li>
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<h4>Safe Lab Work</h4>
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<p>What safety procedures do you use every day in the lab? Did you perform any unusual experiments, or face any unusual safety issues? Write about them here!</p>
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<h4>Safe Shipment</h4>
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<p>Did you face any safety problems in sending your DNA parts to the Registry? How did you solve those problems?</p>
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<p><strong><span style="font-family:comic sans ms,cursive"><span style="font-size:28px">Safety</span></span></strong></p>
  
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<p>Safety is always standing at the top position during our project designing and performing. In a well-organized laboratory, all NEFU-China members have received safety training before starting their experiments. Additionally, we have considered the possible &nbsp;biohazard issues.<br />
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<strong><span style="font-size:22px">Lab safety</span></strong><br />
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According to the World Health Organization Laboratory Biosafety Manual, the rank of our lab is classified as BSL1. Each member was informed of the safety rules and emergency handling. Experiment regulations were strictly observed. During all the experiments, we always wear lab-gowns, rubber gloves and surgical masks. 70％ alcohol was applied to listerize anything that may contact bacteria before and after experiments. In addition, both liquid and solid biohazard waste are autoclaved before disposal.&nbsp;<br />
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<strong><span style="font-size:22px">Project safety</span></strong><br />
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We have subcloned genes related to the autoinducer-2 response in Salmonella and integrated them into Lactobacillus or Lactococcus genome. Then our engineered bacteria can import AI-2 molecules secreted by pathogens in spoiled yogurt and activate the expression of the report gene to produce the blue pigment.<br />
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We needed the genes related to the autoinducer-2 response in Salmonella, so we extracted genomic DNA of Salmonella Typhimurium str. LT2 and amplified these essential genes by PCR. We used Escherichia coli MC1601 for molecular cloning. Besides, we cultured Bacillus subtilis H9 and Escherichia coli CD-2 in order to determine the correlations between their growth and AI-2 production.&nbsp;<br />
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All the organisms used in our project are in Risk Group 1 except for Salmonella typhimurium, which is in Risk Group 2. Since we just need the genomic DNA of Salmonella for gene cloning, we conducted the DNA extraction in a biosafety cabinet. Thus, we do not have substantial contact with live Salmonella.<br />
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Our project aims to create a detecting system that can be potentially used in yogurt fermentation. Our chassis can still be probiotics and benefit intestinal health. The report gene we used is a type of chromoproteins, harmless to both human and the environment, although it may still meet issues faced by other genetically modified food. To reduce potential risks, our future study will focus on food-grade selection makers to replace currently used antibiotic resistance genes. We will also minimize the elements used for genetic engineering. In addition, we planed to develop paper test strip with our bacteria to avoid the issues for genetically modified food.</p>
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<p class="footer" style="color:white;margin-top:20px;text-align:center;"><span>Generated by </span><a href="https://2015.igem.org/Team:NEFU_China/Software">Fligth iGEM</a>.</p>
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Revision as of 17:56, 17 September 2015

Safety

Safety is always standing at the top position during our project designing and performing. In a well-organized laboratory, all NEFU-China members have received safety training before starting their experiments. Additionally, we have considered the possible  biohazard issues.
Lab safety
According to the World Health Organization Laboratory Biosafety Manual, the rank of our lab is classified as BSL1. Each member was informed of the safety rules and emergency handling. Experiment regulations were strictly observed. During all the experiments, we always wear lab-gowns, rubber gloves and surgical masks. 70％ alcohol was applied to listerize anything that may contact bacteria before and after experiments. In addition, both liquid and solid biohazard waste are autoclaved before disposal. 
Project safety
We have subcloned genes related to the autoinducer-2 response in Salmonella and integrated them into Lactobacillus or Lactococcus genome. Then our engineered bacteria can import AI-2 molecules secreted by pathogens in spoiled yogurt and activate the expression of the report gene to produce the blue pigment.
We needed the genes related to the autoinducer-2 response in Salmonella, so we extracted genomic DNA of Salmonella Typhimurium str. LT2 and amplified these essential genes by PCR. We used Escherichia coli MC1601 for molecular cloning. Besides, we cultured Bacillus subtilis H9 and Escherichia coli CD-2 in order to determine the correlations between their growth and AI-2 production. 
All the organisms used in our project are in Risk Group 1 except for Salmonella typhimurium, which is in Risk Group 2. Since we just need the genomic DNA of Salmonella for gene cloning, we conducted the DNA extraction in a biosafety cabinet. Thus, we do not have substantial contact with live Salmonella.
Our project aims to create a detecting system that can be potentially used in yogurt fermentation. Our chassis can still be probiotics and benefit intestinal health. The report gene we used is a type of chromoproteins, harmless to both human and the environment, although it may still meet issues faced by other genetically modified food. To reduce potential risks, our future study will focus on food-grade selection makers to replace currently used antibiotic resistance genes. We will also minimize the elements used for genetic engineering. In addition, we planed to develop paper test strip with our bacteria to avoid the issues for genetically modified food.

Generated by Fligth iGEM.

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