Difference between revisions of "Team:UMaryland/Notebook2"

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<div id='cover'>
 
<div id='bar'>
 
<p style="font-size:64px"><b>Notebook</b>
 
</div>
 
<div id='sidemenu'>
 
<ul>
 
<li><a href="week1" class="smoothScroll"><span>Week 1</span></a></li>
 
<li><a href="week2" class="smoothScroll"><span>week 2</span></a></li>
 
<li><a href='week3' class="smoothScroll"><span>week3</span></a></li>
 
<li><a href='#grind' class="smoothScroll"><span>The Grind</span></a></li>
 
<li><a href='#management' class="smoothScroll"><span>Effective Management</span></a></li>
 
<li><a href='#misc' class="smoothScroll"><span>Misc. Advice</span></a></li>
 
</ul>
 
</div>
 
<div id='buttonset'>
 
<a href="#Week1">
 
<div id='button'>
 
<h4>Week1</h4>
 
</div>
 
</a>
 
 
<a href="#Week2">
 
<div id='button'>
 
<h4>Week2</h4>
 
</div>
 
</a>
 
 
<a href="#Week3">
 
<div id='button'>
 
<h4>Week3</h4>
 
</div>
 
</a>
 
 
<a href="#Week4">
 
<div id='button'>
 
<h4>Week4</h4>
 
</div>
 
</a>
 
 
<a href="#Week5">
 
<div id='button'>
 
<h4>Week5</h4>
 
</div>
 
</a>
 
 
<a href="#Week6">
 
<div id='button'>
 
<h4>Week6</h4>
 
</div>
 
</a>
 
 
 
<a href="#Week7">
 
<div id='button'>
 
<h4>Week7</h4>
 
</div>
 
</a>
 
 
<a href="#Week8">
 
<div id='button'>
 
<h4>Week8</h4>
 
</div>
 
</a>
 
 
<a href="#Week9">
 
<div id='button'>
 
<h4>Week9</h4>
 
</div>
 
</a>
 
 
<a href="#Week10">
 
<div id='button'>
 
<h4>Week10</h4>
 
</div>
 
</a>
 
 
<a href="#Week2">
 
<div id='button'>
 
<h4>Week2</h4>
 
</div>
 
</a>
 
 
<a href="#Week11">
 
<div id='button'>
 
<h4>Week2</h4>
 
</div>
 
</a>
 
 
<a href="#Week12">
 
<div id='button'>
 
<h4>Week12</h4>
 
</div>
 
</a>
 
 
<a href="#Week13">
 
<div id='button'>
 
<h4>Week13</h4>
 
</div>
 
</a>
 
<a href="#Week14">
 
<div id='button'>
 
<h4>Week14</h4>
 
</div>
 
</a><a href="#Week15">
 
<div id='button'>
 
<h4>Week15</h4>
 
</div>
 
</a>
 
<a href="#Week16">
 
<div id='button'>
 
<h4>Week16</h4>
 
</div>
 
</a>
 
 
 
</div>
 
</div>
 
 
 
 
 
<div id='layer2'>
 
<div id='contentbox'>
 
<a name="Week1">
 
<p style="font-size:32px;text-align:center;font-family:Verdana, Geneva, sans-serif;">
 
<b>Week1</b></a>
 
<p style="font-size:24px;text-align:center;">
 
Miraculin:
 
ligated the pBAD promoter in PSB1C3 with the miraculin gene in PSB1C3 using 3A assembly
 
plate had colonies
 
<br>
 
<br>
 
</div>
 
</div>
 
 
<div id='layer1'>
 
<div id='contentbox'>
 
<a name="Week2">
 
<p style="font-size:32px;text-align:center;font-family:Verdana, Geneva, sans-serif;">
 
<b>Week2</b></a>
 
<p style="font-size:24px;text-align:center;">
 
Miraculin:
 
pBAD +miraculin construct was moved back into psb1C3 backbone and sent for sequencing
 
Designing gBlocks:
 
Designed gblocks for epsilon-cyclase (from arabidopsis), pyocin and Hok/Sok
 
<br>
 
<br>
 
</div>
 
</div>
 
 
<div id='layer2'>
 
<div id='contentbox'>
 
<a name="Week3">
 
<p style="font-size:32px;text-align:center;font-family:Verdana, Geneva, sans-serif;">
 
<b>Week3</b></a>
 
<p style="font-size:24px;text-align:center;">
 
Miraculin:
 
sequence confirmed through sequencing
 
failed to extract using French press, FPLC and SDS-Page
 
could be due to high arabinose induction (OD of 1)
 
 
<br>
 
<br>
 
</div>
 
</div>
 
<div id='layer1'>
 
<div id='contentbox'>
 
<a name="Week4">
 
<p style="font-size:32px;text-align:center;font-family:Verdana, Geneva, sans-serif;">
 
<b>Week4</b></a>
 
<p style="font-size:24px;text-align:center;">
 
Miraculin:
 
induced 3 test cultures with  0%, 0.05%, 0.1%, 0.2% arabinose with no significant results
 
will perform procedure again using bl21 instead of Dh5a
 
 
 
<br>
 
<br>
 
</div>
 
</div>
 
 
<div id='layer2'>
 
<div id='contentbox'>
 
<a name="Week5">
 
<p style="font-size:32px;text-align:center;font-family:Verdana, Geneva, sans-serif;">
 
<b>Week5</b></a>
 
<p style="font-size:24px;text-align:center;">
 
Miraculin
 
transformation in BL21 strain was successful
 
SDS page showed a band at roughly 25 kDa
 
Hok/Sok
 
inserted Hok/Sok gblock into PSB1C3 backbone using Gibson assembly
 
construct sent for sequencing
 
Interlab Study
 
transformed parts into dh5a: 3 Anderson promoters, GFP, and RFP
 
 
 
<br>
 
<br>
 
</div>
 
</div>
 
<div id='layer1'>
 
<div id='contentbox'>
 
<a name="Week4">
 
<p style="font-size:32px;text-align:center;font-family:Verdana, Geneva, sans-serif;">
 
<b>Week4</b></a>
 
<p style="font-size:24px;text-align:center;">
 
Miraculin:
 
induced 3 test cultures with  0%, 0.05%, 0.1%, 0.2% arabinose with no significant results
 
will perform procedure again using bl21 instead of Dh5a
 
 
 
<br>
 
<br>
 
</div>
 
</div>
 
</div>
 
 
</html>
 

Latest revision as of 10:19, 18 September 2015