Difference between revisions of "Team:UMaryland/Notebook2"

(Blanked the page)
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Template_All_Teams}}
 
<html>
 
</div></div></div></div></div></div></div></div></div></div>
 
</html>
 
{{Team:UMarylandClasses}}
 
{{Team:UMarylandMenu}}
 
<html>
 
  
<!--Attention! If you are not part of the website team, you are NOT allowed to touch anything above this line without the express permission of Best Kohai.-->
 
 
<style type="text/css">
 
 
h1,h2,h3,h4,p,a {
 
text-decoration: none;
 
}
 
h1 {
 
font-size: 250%;
 
}
 
h2 {
 
font-size: 200%;
 
}
 
h3 {
 
font-size: 150%;
 
}
 
h4 {
 
font-size: 125%;
 
}
 
p {
 
font-size: 100%;
 
}
 
#sidemenu {
 
position:fixed;
 
float:left;
 
width: 200px;
 
top:200px;
 
}
 
 
#sidemenu,
 
#sidemenu ul,
 
#sidemenu ul li,
 
#sidemenu ul li a {
 
  margin: 0;
 
  padding: 0;
 
  border: 0;
 
  list-style: none;
 
  line-height: 1;
 
  display: block;
 
  -webkit-box-sizing: border-box;
 
  -moz-box-sizing: border-box;
 
  box-sizing: border-box;
 
}
 
 
#sidemenu ul ul {
 
  display: none;
 
}
 
.align-right {
 
  float: right;
 
}
 
#sidemenu > ul > li > a {
 
  padding: 15px 20px;
 
  border: 1px solid black;
 
  cursor: pointer;
 
  z-index: 2;
 
  font-size: 14px;
 
  font-weight: bold;
 
  text-decoration: none;
 
  color: #000000;
 
background-image: -webkit-linear-gradient(bottom, #ffffff 0%, #2BB1FF 100%);
 
  box-shadow: inset 0 1px 0 rgba(255, 255, 255, 0.15);
 
}
 
 
#sidemenu > ul > li > a:hover,
 
#sidemenu > ul > li.active > a,
 
#sidemenu > ul > li.open > a {
 
  color: #000000;
 
background-image: -webkit-linear-gradient(top, #C9C9C9 0%, #FFFFFF 100%);
 
}
 
#sidemenu > ul > li.open > a {
 
  box-shadow: inset 0 1px 0 rgba(255, 255, 255, 0.15), 0 1px 1px rgba(0, 0, 0, 0.15);
 
  border-bottom: 1px solid #1682ba;
 
}
 
 
 
#sidemenu > ul > li > a:hover > span::after,
 
#sidemenu > ul > li.active > a > span::after,
 
#sidemenu > ul > li.open > a > span::after {
 
  border-color: #eeeeee;
 
}
 
.holder::before {
 
  top: 18px;
 
  border-top: 2px solid;
 
  border-left: 2px solid;
 
  border-top-color: inherit;
 
  border-left-color: inherit;
 
}
 
#sidemenu ul ul li a {
 
  cursor: pointer;
 
  border-bottom: 1px solid #32373e;
 
  border-left: 1px solid #32373e;
 
  border-right: 1px solid #32373e;
 
  padding: 10px 20px;
 
  z-index: 1;
 
  text-decoration: none;
 
  font-size: 13px;
 
  color: #eeeeee;
 
  background: #49505a;
 
  box-shadow: inset 0 1px 0 rgba(255, 255, 255, 0.1);
 
}
 
#sidemenu ul ul li:hover > a,
 
#sidemenu ul ul li.open > a,
 
#sidemenu ul ul li.active > a {
 
  background: #424852;
 
  color: #ffffff;
 
}
 
#sidemenu ul ul li:first-child > a {
 
  box-shadow: none;
 
}
 
#sidemenu ul ul ul li:first-child > a {
 
  box-shadow: inset 0 1px 0 rgba(255, 255, 255, 0.1);
 
}
 
#sidemenu ul ul ul li a {
 
  padding-left: 30px;
 
}
 
#sidemenu > ul > li > ul > li:last-child > a,
 
#sidemenu > ul > li > ul > li.last > a {
 
  border-bottom: 0;
 
}
 
#sidemenu > ul > li > ul > li.open:last-child > a,
 
#sidemenu > ul > li > ul > li.last.open > a {
 
  border-bottom: 1px solid #32373e;
 
}
 
#sidemenu > ul > li > ul > li.open:last-child > ul > li:last-child > a {
 
  border-bottom: 0;
 
}
 
#sidemenu ul ul li.has-sub > a::after {
 
  display: block;
 
  position: absolute;
 
  content: "";
 
  width: 5px;
 
  height: 5px;
 
  right: 20px;
 
  z-index: 10;
 
  top: 11.5px;
 
  border-top: 2px solid #eeeeee;
 
  border-left: 2px solid #eeeeee;
 
  -webkit-transform: rotate(-135deg);
 
  -moz-transform: rotate(-135deg);
 
  -ms-transform: rotate(-135deg);
 
  -o-transform: rotate(-135deg);
 
  transform: rotate(-135deg);
 
}
 
#sidemenu ul ul li.active > a::after,
 
#sidemenu ul ul li.open > a::after,
 
#sidemenu ul ul li > a:hover::after {
 
  border-color: #ffffff;
 
}
 
 
#layer1 {
 
overflow:hidden;
 
position:relative;
 
width:100%;
 
margin:0px;
 
padding:20px;
 
background-color: #89e1ff;
 
min-height:42px;
 
top:-245px;
 
border-top:2px solid black;
 
}
 
#layer2 {
 
overflow:hidden;
 
position:relative;
 
width:100%;
 
margin:0px;
 
padding:20px;
 
background-color:#ffffff;
 
min-height:42px;
 
top:-245px;
 
border-top:2px solid black;
 
}
 
#layer3 {
 
overflow:hidden;
 
position:relative;
 
width:100%;
 
margin:0px;
 
padding:20px;
 
background-color:#7fcff9;
 
min-height:42px;
 
top:-245px;
 
border-top:2px solid black;
 
}
 
#layer4 {
 
overflow:hidden;
 
position:relative;
 
width:100%;
 
margin:0px;
 
padding:20px;
 
background-color:#ffffff;
 
min-height:42px;
 
}
 
#contentbox{
 
width: 80%;
 
max-width: 1900px;
 
min-width: 1000px;
 
text-align: justify;
 
margin:auto;
 
font-family: "Palatino Linotype", "Book Antiqua", Palatino, serif;
 
}
 
#cover {
 
overflow:hidden;
 
position:relative;
 
width:100%;
 
margin:auto;
 
padding:0px;
 
background-image: url("https://static.igem.org/mediawiki/2015/9/97/Resultsq.png");
 
background-size: 100% ;
 
background-repeat: no-repeat;
 
height: 100%;
 
width:100%;
 
min-height:800px;
 
color: #0DFF00;
 
font-family: Verdana, Geneva, sans-serif;
 
font-size:xx-large;
 
top:-200px;
 
}
 
#buttonset {
 
text-align:center;
 
bottom:0px;
 
position:relative;
 
top:500px;
 
}
 
 
 
#bar{
 
display: inline-block;
 
opacity:1;
 
background-color: rgba(255,255,255,.5);
 
color:black;
 
border-top:4px solid black;
 
border-bottom:4px solid black;
 
width:100%;
 
text-align:center;
 
height:200px;
 
position:absolute;
 
top:200px;
 
text-shadow: 4px 4px 4px white;
 
}
 
</style>
 
 
<div id='cover'>
 
<div id='bar'>
 
<p style="font-size:64px"><b>Notebook</b>
 
</div>
 
<div id='sidemenu'>
 
<ul>
 
<li><a href="#Week1" class="smoothScroll"><span>Week 1</span></a></li>
 
<li><a href="#Week2" class="smoothScroll"><span>Week 2</span></a></li>
 
<li><a href="#Week3" class="smoothScroll"><span>Week 3</span></a></li>
 
<li><a href="#Week4" class="smoothScroll"><span>Week 4</span></a></li>
 
<li><a href="#Week5" class="smoothScroll"><span>Week 5</span></a></li>
 
<li><a href="#Week6" class="smoothScroll"><span>Week 6</span></a></li>
 
<li><a href="#Week7" class="smoothScroll"><span>Week 7</span></a></li>
 
<li><a href="#Week8" class="smoothScroll"><span>Week 8</span></a></li>
 
<li><a href="#Week9" class="smoothScroll"><span>Week 9</span></a></li>
 
<li><a href="#Week10" class="smoothScroll"><span>Week 10</span></a></li>
 
<li><a href="#Week11" class="smoothScroll"><span>Week 11</span></a></li>
 
<li><a href="#Week12" class="smoothScroll"><span>Week 12</span></a></li>
 
<li><a href="#Week13" class="smoothScroll"><span>Week 13</span></a></li>
 
<li><a href="#Week14" class="smoothScroll"><span>Week 14</span></a></li>
 
<li><a href="#Week15" class="smoothScroll"><span>Week 15</span></a></li>
 
<li><a href="#Week16" class="smoothScroll"><span>Week 16</span></a></li>
 
</ul>
 
</div>
 
 
 
 
</div>
 
</div>
 
 
 
 
 
<div id='layer2'>
 
<div id='contentbox'>
 
<a name="Week1">
 
<p style="font-size:32px;text-align:center;font-family:Verdana, Geneva, sans-serif;">
 
<b>Week 1</b></a>
 
<p style="font-size:24px;text-align:center;">
 
Miraculin:
 
ligated the pBAD promoter in PSB1C3 with the miraculin gene in PSB1C3 using 3A assembly
 
plate had colonies
 
<br>
 
<br>
 
</div>
 
</div>
 
 
<div id='layer1'>
 
<div id='contentbox'>
 
<a name="Week2">
 
<p style="font-size:32px;text-align:center;font-family:Verdana, Geneva, sans-serif;">
 
<b>Week 2</b></a>
 
<p style="font-size:24px;text-align:center;">
 
Miraculin:
 
pBAD +miraculin construct was moved back into psb1C3 backbone and sent for sequencing
 
Designing gBlocks:
 
Designed gblocks for epsilon-cyclase (from arabidopsis), pyocin and Hok/Sok
 
<br>
 
<br>
 
</div>
 
</div>
 
 
<div id='layer2'>
 
<div id='contentbox'>
 
<a name="Week 3">
 
<p style="font-size:32px;text-align:center;font-family:Verdana, Geneva, sans-serif;">
 
<b>Week3</b></a>
 
<p style="font-size:24px;text-align:center;">
 
Miraculin:
 
sequence confirmed through sequencing
 
failed to extract using French press, FPLC and SDS-Page
 
could be due to high arabinose induction (OD of 1)
 
 
<br>
 
<br>
 
</div>
 
</div>
 
<div id='layer1'>
 
<div id='contentbox'>
 
<a name="Week4">
 
<p style="font-size:32px;text-align:center;font-family:Verdana, Geneva, sans-serif;">
 
<b>Week 4</b></a>
 
<p style="font-size:24px;text-align:center;">
 
Miraculin:
 
induced 3 test cultures with  0%, 0.05%, 0.1%, 0.2% arabinose with no significant results
 
will perform procedure again using bl21 instead of Dh5a
 
 
 
<br>
 
<br>
 
</div>
 
</div>
 
 
<div id='layer2'>
 
<div id='contentbox'>
 
<a name="Week5">
 
<p style="font-size:32px;text-align:center;font-family:Verdana, Geneva, sans-serif;">
 
<b>Week 5</b></a>
 
<p style="font-size:24px;text-align:center;">
 
Miraculin
 
transformation in BL21 strain was successful
 
SDS page showed a band at roughly 25 kDa
 
Hok/Sok
 
inserted Hok/Sok gblock into PSB1C3 backbone using Gibson assembly
 
construct sent for sequencing
 
Interlab Study
 
transformed parts into dh5a: 3 Anderson promoters, GFP, and RFP
 
 
 
<br>
 
<br>
 
</div>
 
</div>
 
<div id='layer1'>
 
<div id='contentbox'>
 
<a name="Week6">
 
<p style="font-size:32px;text-align:center;font-family:Verdana, Geneva, sans-serif;">
 
<b>Week 6</b></a>
 
<p style="font-size:24px;text-align:center;">
 
Miraculin:
 
induced 3 test cultures with  0%, 0.05%, 0.1%, 0.2% arabinose with no significant results
 
will perform procedure again using bl21 instead of Dh5a
 
 
 
<br>
 
<br>
 
</div>
 
</div>
 
<div id='layer2'>
 
<div id='contentbox'>
 
<a name="Week7">
 
<p style="font-size:32px;text-align:center;font-family:Verdana, Geneva, sans-serif;">
 
<b>Week 7</b></a>
 
<p style="font-size:24px;text-align:center;">
 
 
<br>
 
<br>
 
</div>
 
</div>
 
 
<div id='layer1'>
 
<div id='contentbox'>
 
<a name="Week8">
 
<p style="font-size:32px;text-align:center;font-family:Verdana, Geneva, sans-serif;">
 
<b>Week 8</b></a>
 
<p style="font-size:24px;text-align:center;">
 
 
 
<br>
 
<br>
 
</div>
 
</div>
 
 
<div id='layer2'>
 
<div id='contentbox'>
 
<a name="Week9">
 
<p style="font-size:32px;text-align:center;font-family:Verdana, Geneva, sans-serif;">
 
<b>Week 9</b></a>
 
<p style="font-size:24px;text-align:center;">
 
 
<br>
 
<br>
 
</div>
 
</div>
 
 
<div id='layer1'>
 
<div id='contentbox'>
 
<a name="Week10">
 
<p style="font-size:32px;text-align:center;font-family:Verdana, Geneva, sans-serif;">
 
<b>Week 10</b></a>
 
<p style="font-size:24px;text-align:center;">
 
 
<br>
 
<br>
 
</div>
 
</div>
 
 
<div id='layer2'>
 
<div id='contentbox'>
 
<a name="Week11">
 
<p style="font-size:32px;text-align:center;font-family:Verdana, Geneva, sans-serif;">
 
<b>Week 11</b></a>
 
<p style="font-size:24px;text-align:center;">
 
 
 
<br>
 
<br>
 
</div>
 
</div>
 
 
<div id='layer1'>
 
<div id='contentbox'>
 
<a name="Week12">
 
<p style="font-size:32px;text-align:center;font-family:Verdana, Geneva, sans-serif;">
 
<b>Week 12</b></a>
 
<p style="font-size:24px;text-align:center;">
 
 
<br>
 
<br>
 
</div>
 
</div>
 
 
<div id='layer2'>
 
<div id='contentbox'>
 
<a name="Week13">
 
<p style="font-size:32px;text-align:center;font-family:Verdana, Geneva, sans-serif;">
 
<b>Week 13</b></a>
 
<p style="font-size:24px;text-align:center;">
 
Miraculin:
 
 
 
 
<br>
 
<br>
 
</div>
 
</div>
 
 
<div id='layer1'>
 
<div id='contentbox'>
 
<a name="Week14">
 
<p style="font-size:32px;text-align:center;font-family:Verdana, Geneva, sans-serif;">
 
<b>Week 14</b></a>
 
<p style="font-size:24px;text-align:center;">
 
Miraculin:
 
 
 
 
<br>
 
<br>
 
</div>
 
</div>
 
 
<div id='layer2'>
 
<div id='contentbox'>
 
<a name="Week15">
 
<p style="font-size:32px;text-align:center;font-family:Verdana, Geneva, sans-serif;">
 
<b>Week 15</b></a>
 
<p style="font-size:24px;text-align:center;">
 
Miraculin:
 
 
 
 
<br>
 
<br>
 
</div>
 
</div>
 
 
<div id='layer1'>
 
<div id='contentbox'>
 
<a name="Week16">
 
<p style="font-size:32px;text-align:center;font-family:Verdana, Geneva, sans-serif;">
 
<b>Week 16</b></a>
 
<p style="font-size:24px;text-align:center;">
 
Miraculin:
 
 
 
 
<br>
 
<br>
 
</div>
 
</div>
 
 
</div>
 
 
</html>
 

Latest revision as of 10:19, 18 September 2015