Difference between revisions of "Team:NAIT Edmonton/Protocols"

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<div id="flowchart">
 
<div id="flowchart">
  
     <label class="btn" for="modal-1"><div class="protocol"><font color="#FFFFFF">Literature has shown certain proteins     
+
     <div class="protocol"><font color="#FFFFFF">Literature has shown certain proteins     
     inherently stain in colour.</font></div></label>
+
     inherently stain in colour.</font></div>
  
 
     <div class="line1"></div>
 
     <div class="line1"></div>
  
     <label class="btn" for="modal-1"><div class="protocol"><font color="#FFFFFF">Step 1:
+
     <div class="protocol"><font color="#FFFFFF">Looked up characteristics of said proteins</font></div>
    Blah blah blah, do this.</font></div></label>
+
  
 
     <div class="line1"></div>
 
     <div class="line1"></div>
  
     <label class="btn" for="modal-1"><div class="protocol">Step 1:
+
     <div class="protocol"><font color="White">Isolated and identified the unique characteristics of said proteins so that we can
     Blah blah blah, do this.</div></label>
+
     manually write our own sequences and generate custom proteins.</font></div>
  
 
</div>
 
</div>
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<div id="flowchart">
 
<div id="flowchart">
  
     <label class="btn" for="modal-1"><div class="protocol"><font color="#FFFFFF">Literature has shown certain proteins   
+
     <label class="btn" for="BPlevel"><div class="protocol"><font color="#FFFFFF">Went down to base pair level and wrote out our
     inherently stain in colour.</font></div></label>
+
     sequences with the defining characteristics identified in literature. </font></div></label>
  
 
     <div class="line1"></div>
 
     <div class="line1"></div>
  
     <label class="btn" for="modal-1"><div class="protocol"><font color="#FFFFFF">Step 1:
+
     <label class="btn" for="IDT"><div class="protocol"><font color="#FFFFFF">Ordered custom gBlocks from Integrated DNA Technologies (IDT).</font></div></label>
    Blah blah blah, do this.</font></div></label>
+
  
    <div class="line1"></div>
 
 
    <label class="btn" for="modal-1"><div class="protocol">Step 1:
 
    Blah blah blah, do this.</div></label>
 
  
 
</div>
 
</div>
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<div id="flowchart">
 
<div id="flowchart">
  
     <label class="btn" for="modal-1"><div class="protocol"><font color="#FFFFFF">Literature has shown certain proteins   
+
     <label class="btn" for="MasterMix"><div class="protocol"><font color="#FFFFFF">Make a PCR Master Mix</font></div></label>
    inherently stain in colour.</font></div></label>
+
  
 
     <div class="line1"></div>
 
     <div class="line1"></div>
  
     <label class="btn" for="modal-1"><div class="protocol"><font color="#FFFFFF">Step 1:
+
     <div class="protocol"><font color="#FFFFFF">Set up individual reactions</font></div>
    Blah blah blah, do this.</font></div></label>
+
  
 
     <div class="line1"></div>
 
     <div class="line1"></div>
  
     <label class="btn" for="modal-1"><div class="protocol">Step 1:
+
     <label class="btn" for="PCR"><div class="protocol"><font color="white">Run PCR <br> (click for specific conditions)</font>
     Blah blah blah, do this.</div></label>
+
     </div></label>
 +
 
 +
    <div class="line1"></div>
 +
 
 +
    <label class="btn" for="AgaroseConfirmation"><div class="protocol"><font color="white">Run agarose gel electrophoresis to confirm that PCR was successful</font>
 +
    </div></label>
 +
 
 +
    <div class="line1"></div>
 +
 
 +
    <label class="btn" for="PCRPurification"><div class="protocol"><font color="white">QIAquick PCR Purification</font>
 +
    </div></label>
 +
 
 +
 
  
 
</div>
 
</div>

Revision as of 20:52, 16 August 2015

Team NAIT 2015

Experimental Design

Go through our interactive experimental design flow chart! Many of our protocols are manufacturer specicfied; however, some are customized by us! PDFs of protocols can also be found

Theorizing our Sequences
Literature has shown certain proteins inherently stain in colour.
Looked up characteristics of said proteins
Isolated and identified the unique characteristics of said proteins so that we can manually write our own sequences and generate custom proteins.
Writing our Sequences
PCR
Set up individual reactions
Digestion and Ligation
Transforming Bacteria
Validating the Transformation
Protein Isolation and Purification
SDS PAGE and Silver Staining