Difference between revisions of "Team:Dundee/Sequences"

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                   <p>>IDT_HaemoglobinA<br>
 
                   <p>>IDT_HaemoglobinA<br>
                   ATGGTTCTGTCTCCGGCGGACAAAACCAACGTTAAAGCGGCGTGGGGTAAAGTTGGTGCGCACGCGGGTGAATACGGTGCGGAAGCGCTGGAACGTATGT<br>
+
                   ATGGTTCTGTCTCCGGCGGACAAAACCAACGTTAAAGCGGCGTGGGGTAAAGTTGGTGCGCACGCGGGTGAATACGGTGCGGAAGCGCTGGAACGTATGT
                   TCCTGTCTTTCCCGACCACCAAAACCTACTTCCCGCACTTCGACCTGTCTCACGGTTCTGCGCAGGTTAAAGGTCACGGTAAAAAAGTTGCGGACGCGCT<br>
+
                   TCCTGTCTTTCCCGACCACCAAAACCTACTTCCCGCACTTCGACCTGTCTCACGGTTCTGCGCAGGTTAAAGGTCACGGTAAAAAAGTTGCGGACGCGCT
                   GACCAACGCGGTTGCGCACGTTGACGACATGCCGAACGCGCTGTCTGCGCTGTCTGACCTGCACGCGCACAAACTGCGTGTTGACCCGGTTAACTTCAAA<br>
+
                   GACCAACGCGGTTGCGCACGTTGACGACATGCCGAACGCGCTGTCTGCGCTGTCTGACCTGCACGCGCACAAACTGCGTGTTGACCCGGTTAACTTCAAA
                   CTGCTGTCTCACTGCCTGCTGGTTACCCTGGCGGCGCACCTGCCGGCGGAGTTCACCCCGGCGGTTCACGCGTCTCTGGACAAATTCCTGGCGTCTGTTT<br>CTACCGTTCTGACCTCTAAATACCGTTAA</p>
+
                   CTGCTGTCTCACTGCCTGCTGGTTACCCTGGCGGCGCACCTGCCGGCGGAGTTCACCCCGGCGGTTCACGCGTCTCTGGACAAATTCCTGGCGTCTGTTTCTACCGTTCTGACCTCTAAATACCGTTAA</p>
  
 
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                 </div>
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             <span class="box-title">Haemoglobin A</span> <!--Title of collapsible box-->
 
             <span class="box-title">Haemoglobin A</span> <!--Title of collapsible box-->
               <span type="button" class="chevron_toggleable box-btn glyphicon glyphicon-chevron-down" data-toggle="collapse" data-target="#collapsiblew1-1"></span>
+
               <span type="button" class="chevron_toggleable box-btn glyphicon glyphicon-chevron-down" data-toggle="collapse" data-target="#collapsiblew1-2"></span>
 
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           <div class="box">
 
             <span class="box-title">Haemoglobin A</span> <!--Title of collapsible box-->
 
             <span class="box-title">Haemoglobin A</span> <!--Title of collapsible box-->
               <span type="button" class="chevron_toggleable box-btn glyphicon glyphicon-chevron-down" data-toggle="collapse" data-target="#collapsiblew1-1"></span>
+
               <span type="button" class="chevron_toggleable box-btn glyphicon glyphicon-chevron-down" data-toggle="collapse" data-target="#collapsiblew1-3"></span>
 
                 <div id="collapsiblew1-3" class="collapse box-content">
 
                 <div id="collapsiblew1-3" class="collapse box-content">
  

Revision as of 17:32, 19 August 2015

Sequences

For The Forensic Toolkit

Sequences for Blood-detector
Haemoglobin A

>IDT_HaemoglobinA
ATGGTTCTGTCTCCGGCGGACAAAACCAACGTTAAAGCGGCGTGGGGTAAAGTTGGTGCGCACGCGGGTGAATACGGTGCGGAAGCGCTGGAACGTATGT TCCTGTCTTTCCCGACCACCAAAACCTACTTCCCGCACTTCGACCTGTCTCACGGTTCTGCGCAGGTTAAAGGTCACGGTAAAAAAGTTGCGGACGCGCT GACCAACGCGGTTGCGCACGTTGACGACATGCCGAACGCGCTGTCTGCGCTGTCTGACCTGCACGCGCACAAACTGCGTGTTGACCCGGTTAACTTCAAA CTGCTGTCTCACTGCCTGCTGGTTACCCTGGCGGCGCACCTGCCGGCGGAGTTCACCCCGGCGGTTCACGCGTCTCTGGACAAATTCCTGGCGTCTGTTTCTACCGTTCTGACCTCTAAATACCGTTAA

Haemoglobin A

>IDT_HaemoglobinB
ATGGTTCACCTGACCCCGGAAGAAAAATCTGCGGTTACCGCGCTGTGGGGTAAAGTTAACGTTGACGAAGTTGGTGGTGAAGCGCTGGGTCGTCTGCTGG
TTGTTTACCCGTGGACCCAGCGTTTCTTCGAATCTTTCGGTGACCTGTCTACCCCGGACGCGGTTATGGGTAACCCGAAAGTTAAAGCGCACGGTAAAAA
AGTTCTGGGTGCGTTCTCTGACGGTCTGGCGCACCTGGACAACCTGAAAGGCACCTTCGCGACCCTGTCTGAACTGCACTGCGACAAACTGCACGTTGAC
CCGGAAAACTTCCGTCTGCTGGGTAACGTTCTGGTTTGCGTTCTGGCGCACCACTTCGGTAAAGAGTTCACCCCGCCGGTTCAGGCGGCGTACCAGAAAG
TTGTTGCGGGTGTTGCGAACGCGCTGGCGCACAAATACCACTAA

Haemoglobin A

>IDT_Haptoglobin
ATGTCTGCGCTGGGTGCGGTTATCGCGCTGCTGCTGTGGGGTCAGCTGTTCGCGGTTGACTCTGGTAACGACGTTACCGACATCGCGGACGACGGTTGCC
CGAAACCGCCGGAAATCGCGCACGGTTACGTTGAACACTCTGTTCGTTACCAGTGCAAAAACTACTACAAACTGCGTACCGAAGGTGACGGTGTTTACAC
CCTGAACGACAAAAAACAGTGGATCAACAAAGCAGTAGGCGACAAACTGCCGGAATGCGAAGCCGATGACGGCTGTCCGAAACCACCGGAGATCGCTCAT
GGCTACGTCGAACACTCGGTGCGTTATCAGTGCAAAAACTACTACAAACTGCGCACGGAAGGAGACGGGGTGTACACTCTTAATAACGAGAAACAGTGGA
TTAACAAAGCGGTTGGCGATAAGCTGCCGGAATGTGAGGCAGTCTGCGGTAAACCGAAAAACCCGGCGAACCCGGTTCAGCGTATCTTGGGCGGGCACTT
AGATGCGAAAGGTTCATTCCCGTGGCAGGCCAAAATGGTTTCCCACCACAATCTCACGACAGGGGCGACCCTGATCAACGAGCAGTGGTTGCTGACCACT
GCTAAAAATCTGTTTCTGAACCATAGCGAAAATGCGACGGCGAAAGACATCGCGCCGACCCTGACCCTGTACGTTGGTAAAAAACAGCTGGTTGAAATCG
AAAAAGTTGTTCTGCACCCGAACTACTCTCAGGTTGACATCGGTCTGATCAAACTGAAACAGAAAGTTTCTGTTAACGAACGTGTTATGCCGATCTGCCT
GCCGTCTAAAGACTACGCGGAAGTTGGTCGTGTTGGTTACGTTTCTGGTTGGGGTCGTAACGCGAACTTCAAATTCACCGACCACCTGAAATACGTTATG
CTGCCGGTTGCGGACCAGGACCAGTGCATCCGTCACTACGAAGGTTCTACCGTTCCGGAAAAAAAAACCCCGAAATCTCCGGTTGGTGTTCAGCCGATCC
TGAACGAACACACCTTCTGCGCGGGTATGTCTAAATACCAGGAAGACACCTGCTACGGTGACGCGGGTTCTGCGTTCGCGGTTCACGACCTGGAAGAAGA
CACCTGGTACGCGACCGGTATCCTGTCTTTCGACAAATCTTGCGCGGTTGCGGAATACGGTGTTTACGTTAAAGTTACCTCTATCCAGGACTGGGTTCAG
AAAACCATCGCGGAAAACTAA

Sequences for the Chromate-detector
BBa_K1058008

>BBa_K1058008
ATTGCTTATTCCTATTGCCATTTGCTTTTATTTTGCAATACGTTTTAGCAACGCACAACACCTTATGGGTGTGCTGCTTCCATTGTGATTGCGCAAATGT
CCGTTTTTGCAATCTACTCAAGACTTTATTTCGTAGATCTTATCTCATTATTGTAGTAACATCTACGACATGAATTTGCTTTCGCCTATCCTTTCCTTGC
CTACTGAAAACGCGACCGTCCGGCAACGGACGTGGCGTGCCCTCAAAGCCTCCGGCGCTGCGGTGCTGCGCGACGGCGTGTACCTGATGCCCGACCGCGA
CGAATGCCGCGCGGTGCTGGATAACTTGGCCTCCGATGTGCGTGAAGGCGGTGGGGTCGCTCATGTGCTGCGTATGGAAGACCCTGAAGGGGTCAACTTC
GTCGCATTATTCGACCGCAGCAACGATTTTGCTGCCTTGCTGGTCGATGTCCATCATCTCAGGCAGACGCTGACATTGGATACCGTGCAAGACGTGCTGC
GGCAGGTGCGTAAGCTTCGCAAATCCTTTACTACGCTGGTTGAAATCGACTTCTACCCCGGCGAGGCTCAGCGTCAAGCGGACAGTGCGTTGTGTGAACT
GGAACAAGCTTGCGCCCGCACGCTGTCGCCGGACGAGCCGCACGCTGTAGAGGGGACTATTACCCGCTTGGATCGTTTGGATTACCAGGCCCGTACCTGG
GCCACTCGCGCACGTCCTTGGGTTGATCGGCTCGCCAGCGCATGGCTGATCCGGCGCTTCATCGACCCGCAGGCGCGCATCCTTTGGTTGGCAACCCCTG
CGGACTGCCCGCCGGATGCGTTGGGCTTCGACTTCGATGGCGCGACGTTCAGCCATGTCGGCAGCCGTGTCACGTTCGAGGTCCTGGCGGCGAGCTTTGGGCTGGAACAGCCCGCCATCACAAGGATTGGCCTTGTGGTGCATTACCTCGACGTGGGCGGCATCCAGCCGCCAGAGGCCACTGGTATCGAAAGCGTACTGGCCGGTTTGCGGGAAACGGTTGACCACGACGATCAACTATTGGCCATCGCCTCCACTGTGTTCGATGGCTTACTGGCCAGCTTTGAAAAAGGGACCCTCACCGTATGAGGATCCGAAGGAGATATACCATGGTGAGCAAGGGCGAGGAGCTGTTCACCGGGGTGGTGCCCATCCTGGTCGAGCTGGACGGCGACGTAAACGGCCACAAGTTCAGCGTGTCCGGCGAGGGCGAGGGCGATGCCACCTACGGCAAGCTGACCCTGAAGTTCATCTGCACCACCGGCAAGCTGCCCGTGCCCTGGCCCACCCTCGTGACCACCCTGACCTACGGCGTGCAGTGCTTCAGCCGCTACCCCGACCACATGAAGCAGCACGACTTCTTCAAGTCCGCCATGCCCGAAGGCTACGTCCAGGAGCGCACCATCTTCTTCAAGGACGACGGCAACTACAAGACCCGCGCCGAGGTGAAGTTCGAGGGCGACACCCTGGTGAACCGCATCGAGCTGAAGGGCATCGACTTCAAGGAGGACGGCAACATCCTGGGGCACAAGCTGGAGTACAACTACAACAGCCACAACGTCTATATCATGGCCGACAAGCAGAAGAACGGCATCAAGGTGAACTTCAAGATCCGCCACAACATCGAGGACGGCAGCGTGCAGCTCGCCGACCACTACCAGCAGAACACCCCCATCGGCGACGGCCCCGTGCTGCTGCCCGACAACCACTACCTGAGCACCCAGTCCGCCCTGAGCAAAGACCCCAACGAGAAGCGCGATCACATGGTCCTGCTGGAGTTCGTGACCGCCGCCGGGATCACTCTCGGCATGGACGAGCTGTACAAGTA

pChr

>pChr ATTGCTTATTCCTATTGCCATTTGCTTTTATTTTGCAATACGTTTTAGCAACGCACAACACCTTATGGGTGTGCTGCTTCCATTGTGATTGCGCAAATGTCCGTTTTTGCAATCTACTCAAGACTTTATTTCGTAGATCTTATCTCATTATTGTAGTAACATCTACGAC

ChrB

>ChrB ATGAATTTGCTTTCGCCTATCCTTTCCTTGCCTACTGAAAACGCGACCGTCCGGCAACGGACGTGGCGTGCCCTCAAAGCCTCCGGCGCTGCGGTGCTGCGCGACGGCGTGTACCTGATGCCCGACCGCGACGAATGCCGCGCGGTGCTGGATAACTTGGCCTCCGATGTGCGTGAAGGCGGTGGGGTCGCTCATGTGCTGCGTATGGAAGACCCTGAAGGGGTCAACTTCGTCGCATTATTCGACCGCAGCAACGATTTTGCTGCCTTGCTGGTCGATGTCCATCATCTCAGGCAGACGCTGACATTGGATACCGTGCAAGACGTGCTGCGGCAGGTGCGTAAGCTTCGCAAATCCTTTACTACGCTGGTTGAAATCGACTTCTACCCCGGCGAGGCTCAGCGTCAAGCGGACAGTGCGTTGTGTGAACTGGAACAAGCTTGCGCCCGCACGCTGTCGCCGGACGAGCCGCACGCTGTAGAGGGGACTATTACCCGCTTGGATCGTTTGGATTACCAGGCCCGTACCTGGGCCACTCGCGCACGTCCTTGGGTTGATCGGCTCGCCAGCGCATGGCTGATCCGGCGCTTCATCGACCCGCAGGCGCGCATCCTTTGGTTGGCAACCCCTGCGGACTGCCCGCCGGATGCGTTGGGCTTCGACTTCGATGGCGCGACGTTCAGCCATGTCGGCAGCCGTGTCACGTTCGAGGTCCTGGCGGCGAGCTTTGGGCTGGAACAGCCCGCCATCACAAGGATTGGCCTTGTGGTGCATTACCTCGACGTGGGCGGCATCCAGCCGCCAGAGGCCACTGGTATCGAAAGCGTACTGGCCGGTTTGCGGGAAACGGTTGACCACGACGATCAACTATTGGCCATCGCCTCCACTGTGTTCGATGGCTTACTGGCCAGCTTTGAAAAAGGGACCCTCACCGTATGA

Optimised ChrB

>ChrBopt ATGAACCTGCTGTCTCCGATCCTGTCTCTGCCGACCGAAAACGCGACCGTCCGGCAACGGACGTGGCGTGCCCTCAAAGCCTCCGGCGCTGCGGTGCTGCGCGACGGCGTGTACCTGATGCCCGACCGCGACGAATGCCGCGCGGTGCTGGATAACTTGGCCTCCGATGTGCGTGAAGGCGGTGGGGTCGCTCATGTGCTGCGTATGGAAGACCCTGAAGGGGTCAACTTCGTCGCATTATTCGACCGCAGCAACGATTTTGCTGCCTTGCTGGTCGATGTCCATCATCTCAGGCAGACGCTGACATTGGATACCGTGCAAGACGTGCTGCGGCAGGTGCGTAAGCTTCGCAAATCCTTTACTACGCTGGTTGAAATCGACTTCTACCCCGGCGAGGCTCAGCGTCAAGCGGACAGTGCGTTGTGTGAACTGGAACAAGCTTGCGCCCGCACGCTGTCGCCGGACGAGCCGCACGCTGTAGAGGGGACTATTACCCGCTTGGATCGTTTGGATTACCAGGCCCGTACCTGGGCCACTCGCGCACGTCCTTGGGTTGATCGGCTCGCCAGCGCATGGCTGATCCGGCGCTTCATCGACCCGCAGGCGCGCATCCTTTGGTTGGCAACCCCTGCGGACTGCCCGCCGGATGCGTTGGGCTTCGACTTCGATGGCGCGACGTTCAGCCATGTCGGCAGCCGTGTCACGTTCGAGGTCCTGGCGGCGAGCTTTGGGCTGGAACAGCCCGCCATCACAAGGATTGGCCTTGTGGTGCATTACCTCGACGTGGGCGGCATCCAGCCGCCAGAGGCCACTGGTATCGAAAGCGTACTGGCCGGTTTGCGGGAAACGGTTGACCACGACGATCAACTATTGGCCATCGCCTCCACTGTGTTCGATGGCTTACTGGCCAGCTTTGAAAAAGGGACCCTCACCGTATGA

GFPmut2

>GFPmut2 ATGAGTAAAGGAGAAGAACTTTTCACTGGAGTTGTCCCAATTCTTGTTGAATTAGATGGCGATGTTAATGGGCAAAAATTCTCTGTCAGTGGAGAGGGTGAAGGTGATGCAACATACGGAAAACTTACCCTTAAATTTATTTGCACTACTGGGAAGCTACCTGTTCCATGGCCAACACTTGTCACTACTTTCGCGTATGGTCTTCAATGCTTTGCGAGATACCCAGATCATATGAAACAGCATGACTTTTTCAAGAGTGCCATGCCCGAAGGTTATGTACAGGAAAGAACTATATTTTACAAAGATGACGGGAACTACAAGACACGTGCTGAAGTCAAGTTTGAAGGTGATACCCTTGTTAATAGAATCGAGTTAAAAGGTATTGATTTTAAAGAAGATGGAAACATTCTTGGACACAAAATGGAATACAACTATAACTCACATAATGTATACATCATGGCAGACAAACCAAAGAATGGAATCAAAGTTAACTTCAAAATTAGACACAACATTAAAGATGGAAGCGTTCAATTAGCAGACCATTATCAACAAAATACTCCAATTGGCGATGGCCCTGTCCTTTTACCAGACAACCATTACCTGTCCACACAATCTGCCCTTTCCAAAGATCCCAACGAAAAGAGAGATCACATGATCCTTCTTGAGTTTGTAACAGCTGCTGGGATTACACATGGCATGGATGAACTATACAAATAA

pChr-GFP

>pChrGFP ATTGCTTATTCCTATTGCCATTTGCTTTTATTTTGCAATACGTTTTAGCAACGCACAACACCTTATGGGTGTGCTGCTTCCATTGTGATTGCGCAAATGTCCGTTTTTGCAATCTACTCAAGACTTTATTTCGTAGATCTTATCTCATTATTGTAGTAACATCTACGACTACTAGACACAGAGGAACAGGTATGAGTAAAGGAGAAGAACTTTTCACTGGAGTTGTCCCAATTCTTGTTGAATTAGATGGCGATGTTAATGGGCAAAAATTCTCTGTCAGTGGAGAGGGTGAAGGTGATGCAACATACGGAAAACTTACCCTTAAATTTATTTGCACTACTGGGAAGCTACCTGTTCCATGGCCAACACTTGTCACTACTTTCGCGTATGGTCTTCAATGCTTTGCGAGATACCCAGATCATATGAAACAGCATGACTTTTTCAAGAGTGCCATGCCCGAAGGTTATGTACAGGAAAGAACTATATTTTACAAAGATGACGGGAACTACAAGACACGTGCTGAAGTCAAGTTTGAAGGTGATACCCTTGTTAATAGAATCGAGTTAAAAGGTATTGATTTTAAAGAAGATGGAAACATTCTTGGACACAAAATGGAATACAACTATAACTCACATAATGTATACATCATGGCAGACAAACCAAAGAATGGAATCAAAGTTAACTTCAAAATTAGACACAACATTAAAGATGGAAGCGTTCAATTAGCAGACCATTATCAACAAAATACTCCAATTGGCGATGGCCCTGTCCTTTTACCAGACAACCATTACCTGTCCACACAATCTGCCCTTTCCAAAGATCCCAACGAAAAGAGAGATCACATGATCCTTCTTGAGTTTGTAACAGCTGCTGGGATTACACATGGCATGGATGAACTATACAAATAA