Difference between revisions of "Team:Aalto-Helsinki/Modeling propane"
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<p> In our mathematical model our goal is to grasp the important concepts underlying the experiments made in the lab, and to see how those concepts could help us produce more propane. By having a better understanding of the ideas that govern our project, we could see the influence of each compound in the reaction pathway and have a basis to make decisions that would have a long term impact in our results.</p> | <p> In our mathematical model our goal is to grasp the important concepts underlying the experiments made in the lab, and to see how those concepts could help us produce more propane. By having a better understanding of the ideas that govern our project, we could see the influence of each compound in the reaction pathway and have a basis to make decisions that would have a long term impact in our results.</p> | ||
− | <p>We separated our modeling in | + | <p>We separated our modeling in four modules:</p> |
<h2>Derministic modeling of the reaction pathway</h2> | <h2>Derministic modeling of the reaction pathway</h2> | ||
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<p>We wanted to know whether our pathway could produce propane steadily. In order to understand if this would be plausible, we performed a stability analysis of our reaction. To conclude these calculations, we used again the ideas behind our deterministic modeling.</p> | <p>We wanted to know whether our pathway could produce propane steadily. In order to understand if this would be plausible, we performed a stability analysis of our reaction. To conclude these calculations, we used again the ideas behind our deterministic modeling.</p> | ||
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+ | <h2>Modeling the whole cell</h2> | ||
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+ | <p>Although our models tell a lot about the reaction pathway, they are still lacking since not everything can be taken into account. This is why we did modeling with Cobra toolbox, for which there is a ready model of e. coli that could be modified to take into account our pathway.</p> | ||
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Revision as of 09:43, 16 June 2015