Difference between revisions of "Team:Paris Saclay/Notebook/August/20"

(Created page with "=Thursday 20th August= ==Lab Work== ===Digestion for check=== ''by Audrey'' Biobricks: * BBa_K115017 (control +) * BBa_J23101 + GFP (control -) * BBa_K1707000 #2, #3 and #4 * ...")
 
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{{Team:Paris_Saclay/notebook_header}}
 
=Thursday 20th August=
 
=Thursday 20th August=
 
==Lab Work==
 
==Lab Work==
 
  
 
===Digestion for check===
 
===Digestion for check===
 
''by Audrey''
 
''by Audrey''
  
Biobricks:
 
 
* BBa_K115017 (control +)
 
* BBa_K115017 (control +)
 
* BBa_J23101 + GFP (control -)
 
* BBa_J23101 + GFP (control -)
Line 25: Line 24:
 
** 2 µL Buffer 3 10x (Biolabs)
 
** 2 µL Buffer 3 10x (Biolabs)
 
** 5 µL H2O
 
** 5 µL H2O
 
  
 
===Electrophoresis to check PCR products===
 
===Electrophoresis to check PCR products===
Line 36: Line 34:
  
 
We can conclude that all clones aren't OK
 
We can conclude that all clones aren't OK
 
  
 
===Purification===
 
===Purification===
 
''by Pauline''
 
''by Pauline''
  
Biobricks:
 
 
* BBa_K1707022 #1
 
* BBa_K1707022 #1
 
* BBa_K1707023 #1
 
* BBa_K1707023 #1
Line 55: Line 51:
  
 
Digestion products:
 
Digestion products:
Biobricks:
 
 
* BBa_K115017 (control +)
 
* BBa_K115017 (control +)
 
* BBa_J23101 + GFP (control -)
 
* BBa_J23101 + GFP (control -)
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Quantification:
 
Quantification:
Biobricks:
 
 
* BBa_K1707022 #1: ?
 
* BBa_K1707022 #1: ?
 
* BBa_K1707023 #1: nothing
 
* BBa_K1707023 #1: nothing
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''by Pauline''
 
''by Pauline''
  
Biobrick: BBa_K1707004 #2
+
* BBa_K1707004 #2
  
 
In 5mL LB + 5µL Ampicillin
 
In 5mL LB + 5µL Ampicillin
 
 
  
 
===Ligation===
 
===Ligation===
 
''by Pauline''
 
''by Pauline''
  
BBa_K1707037= BBa_K1707028 + BBa_K1707034
+
* BBa_K1707037 = BBa_K1707028 + BBa_K1707034
  
 
Mix:
 
Mix:
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Incubation 4°C, ON
 
Incubation 4°C, ON
 
  
 
===Quantification===
 
===Quantification===
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We can't see anything
 
We can't see anything
 
 
 
  
 
'''Member present:'''
 
'''Member present:'''

Revision as of 07:57, 15 September 2015


Thursday 20th August

Lab Work

Digestion for check

by Audrey

  • BBa_K115017 (control +)
  • BBa_J23101 + GFP (control -)
  • BBa_K1707000 #2, #3 and #4
  • BBa_K1707013 #1
  • BBa_K1707030 #1
  • BBa_K1707019 #1
  • BBa_K1707020 #2
  • BBa_K1707021 #2
  • BBa_K1707027 #1
  • BBa_K1707035 #1
  • BBa_K1707036 #1

Mix for each tub:

    • 2 µL plasmid
    • 1 µL SpeI (Biolabs)
    • 1 µL BspE1 (Biolabs)
    • 2 µL Buffer 3 10x (Biolabs)
    • 5 µL H2O

Electrophoresis to check PCR products

by Audrey

Agarose gel 1%, Migration 90V

Biobricks:

  • BBa_K1707031 #7 to #26

We can conclude that all clones aren't OK

Purification

by Pauline

  • BBa_K1707022 #1
  • BBa_K1707023 #1
  • BBa_K1707004 #2
  • BBa_K1707034 #1
  • BBa_K1707028 #1

With Macherey Nagel purification kit


Electrophoresis

by Pauline

Digestion products:

  • BBa_K115017 (control +)
  • BBa_J23101 + GFP (control -)
  • BBa_K1707000 #2, #3 and #4
  • BBa_K1707013 #1
  • BBa_K1707030 #1
  • BBa_K1707019 #1
  • BBa_K1707020 #2
  • BBa_K1707021 #2
  • BBa_K1707027 #1
  • BBa_K1707035 #1
  • BBa_K1707036 #1

Quantification:

  • BBa_K1707022 #1: ?
  • BBa_K1707023 #1: nothing
  • BBa_K1707004 #2: nothing
  • BBa_K1707034 #1: 20 µg/µL
  • BBa_K1707028 #1: 10 µg/µL


New culture

by Pauline

  • BBa_K1707004 #2

In 5mL LB + 5µL Ampicillin

Ligation

by Pauline

  • BBa_K1707037 = BBa_K1707028 + BBa_K1707034

Mix:

  • 8 µL BBa_K1707028
  • 10 µL BBa_K1707034
  • 2 µL Ligase
  • 2,5 µL Buffer
  • 2,5 µL H2O

Incubation 4°C, ON

Quantification

by Pauline

BIobricks:

  • BBa_K1707022 #1
  • BBa_K1707023 #1

We can't see anything

Member present:

  • Instructors: Claire
  • Students: Pauline and Audrey

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