Difference between revisions of "Team:NTU-LIHPAO-Taiwan/Notebook"

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<div class="Text3_SubSub">
 
<div class="Text3_SubSub">
 
[terminator] ----- Result: Succeeded
 
[terminator] ----- Result: Succeeded
 +
</div>
 +
 +
 +
<div class="Container2"><div class="Text2">8/2</div></div>
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<div class="Text3">
 +
<Green>Suicide Part:</Green>
 +
</div>
 +
<div class="Text3_Sub">
 +
Extract the plasmid:
 +
</div>
 +
<div class="Text3_SubSub">
 +
[RFP](BBa_E1010)
 +
</div>
 +
<div class="Text3_Sub">
 +
Restriction enzyme:
 +
</div>
 +
<div class="Text3_SubSub">
 +
[RFP] cleave by EcoRI and SpeI
 +
</div>
 +
        <div class="Text3_SubSub">
 +
[Cl] cleave by XbaI and PstI
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</div>
 +
        <div class="Text3_SubSub">
 +
[pSB1A3] cleave by EcoRI and PstI
 +
</div>
 +
 +
 +
<div class="Container2"><div class="Text2">8/5</div></div>
 +
<div class="Text3">
 +
<Blue>Passaged L.c.393</Blue>
 +
</div>
 +
<div class="Text3">
 +
<Blue>Manufacture MRS plate</Blue>
 +
</div>
 +
<div class="Text3">
 +
<Green>PYY part</Green>
 +
</div>
 +
<div class="Text3_Sub">
 +
Redissoluted DNA of total synthesis
 +
</div>
 +
<div class="Text3_Sub">
 +
Restriction enzyme:
 +
</div>
 +
        <div class="Text3_SubSub">
 +
[signalpeptide -PYY] cleave by EcoRI and PstI
 +
</div>
 +
        <div class="Text3_Sub">
 +
Ligation:
 +
</div>
 +
        <div class="Text3_SubSub">
 +
[signalpeptide-PYY]+ [pSB1C3]
 +
</div>
 +
        <div class="Text3_SubS">
 +
Transformation
 +
</div>
 +
 +
 +
<div class="Container2"><div class="Text2">8/6</div></div>
 +
<div class="Text3">
 +
<Blue>Passaged L.c.393</Blue>
 +
</div>
 +
<div class="Text3">
 +
<Green>PYY part</Green>
 +
</div>
 +
<div class="Text3_Sub">
 +
Restriction enzyme:
 +
</div>
 +
<div class="Text3_SubSub">
 +
[PYY] cleave by EcoRI and PstI
 +
</div>
 +
<div class="Text3_SubSub">
 +
[TAT-PYY] cleave by EcoRI and PstI
 +
</div>
 +
<div class="Text3_SubSub">
 +
[Y2R] cleave by KpnI and XhoI
 +
</div>
 +
<div class="Text3_Sub">
 +
Ligation:
 +
</div>
 +
<div class="Text3_SubSub">
 +
[PYY]+ [pSB1C3]
 +
</div>
 +
<div class="Text3_SubSub">
 +
[TAT-PYY]+ [pSB1C3]
 +
</div>
 +
<div class="Text3_SubSub">
 +
[Y2R]+[pcDNA]
 +
</div>
 +
<div class="Text3_Sub">
 +
Transformation
 
</div>
 
</div>
  

Revision as of 09:53, 15 September 2015

NTU-LIHPAO-Taiwan

7/4
Manufacture CP+ plate
7/6
Learn how to transform
Suicide Part:
Transformation of:
[RBS] (BBa_B0034), [C2] (BBa_C0053)
7/7
Learn how to manufacture competent cell
Manufacture competent cell
PYY part:
Transformation of:
[promoter] (BBa_J23100), [signal peptide] (BBa_K554002), [terminator] (BBa_B0015)
Suicide Part:
Transformation of:
[pC1] (BBa_R0051), [pC2] (BBa_R0053), [endolysin] (BBa_K112806), [C1] (BBa_C0051)
7/8
Learn how to extract the plasmid
Learn how to conduct the gel extraction and electrophoresis
Suicide Part:
Extract the plasmid:
[RBS] (BBa_B0034), [C2] (BBa_C0053)
Restriction enzyme:
[RBS] cleave by EcoRI, [C2] cleave by EcoRI and PstI
Gel electrophoresis:
[RBS] ----- Result: Failed (Smeared band was too blurred)
[C2] ----- Result: Succeeded
Transformation of:
[pC1] (BBa_R0051), [pC2] (BBa_R0053), [endolysin] (BBa_K112806) again
7/9
Suicide Part:
Extract the plasmid:
[RBS] (BBa_B0034), [C1] (BBa_C0051), [endolysin] (BBa_K112806)
Gel electrophoresis:
[RBS] ----- Result: Failed (Smeared band was too blurred)
[C1] ----- Result: Succeeded
[endolysin] ----- Result: Failed (Smeared band was too blurred)
PYY part:
Extract the plasmid:
[signal peptide] (BBa_K554002), [terminator] (BBa_B0015)
Gel electrophoresis:
[signal peptide] ----- Result: Succeeded
[terminator] ----- Result: Succeeded
7/10
Manufacture CP+ plate
Manufacture Amp+ plate
Suicide Part:
Gel electrophoresis:
[RBS] (BBa_B0034) ----- Result: Failed (Smeared band was too blurred)
[C2] (BBa_C0053) ----- Result: Succeeded
Gel extraction:
[C2]
7/11
Suicide Part:
Extract the plasmid:
[RBS] (BBa_B0034), [C1] (BBa_C0051), [endolysin] (BBa_K112806)
PYY part:
Transformation of:
[promoter] (BBa_J23101)
7/12
Suicide Part:
Extract the plasmid:
[pC1] (BBa_R0051)
7/13
PYY part:
Extract the plasmid:
[promoter] (BBa_J23101)
Gel electrophoresis (two white colonies & two red colonies):
[promoter] ------ Result: Failed (white colonies didn’t have band, red colonies had band but not the correct size, we speculated that was pollution)
7/20
Discuss about total synthesis
7/13
PYY part:
Transformation of:
[terminator] (BBa_B0015)
7/24
Discuss our project with professor
PYY part:
Extract the plasmid:
[terminator] (BBa_B0015)
Gel electrophoresis:
[terminator] ----- Result: Failed
7/25
Discuss our problems with Instructor
7/26
PYY part:
Cultured [terminator] again
7/27
PYY part:
Extract the plasmid:
[terminator] (BBa_B0015)
Gel electrophoresis:
[terminator] ----- Result: Succeeded
8/2
Suicide Part:
Extract the plasmid:
[RFP](BBa_E1010)
Restriction enzyme:
[RFP] cleave by EcoRI and SpeI
[Cl] cleave by XbaI and PstI
[pSB1A3] cleave by EcoRI and PstI
8/5
Passaged L.c.393
Manufacture MRS plate
PYY part
Redissoluted DNA of total synthesis
Restriction enzyme:
[signalpeptide -PYY] cleave by EcoRI and PstI
Ligation:
[signalpeptide-PYY]+ [pSB1C3]
Transformation
8/6
Passaged L.c.393
PYY part
Restriction enzyme:
[PYY] cleave by EcoRI and PstI
[TAT-PYY] cleave by EcoRI and PstI
[Y2R] cleave by KpnI and XhoI
Ligation:
[PYY]+ [pSB1C3]
[TAT-PYY]+ [pSB1C3]
[Y2R]+[pcDNA]
Transformation
Maintained by the iGEM team NTU-LIHPAO-Taiwan    ©2015 NTU-LIHPAO-Taiwan