Difference between revisions of "Team:Penn"

 
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{{Penn}}
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{{Team:Penn/CSS}}
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<html>
<h2> Penn iGEM 2015! </h2>
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<head>
<p>Your team has been approved and you are ready to start the iGEM season! </p>
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<!--<link rel="stylesheet" type="text/css" media="screen, projection" href="https://98c43ce680a0761e7c3ad3c1d7ae34f6de6db886.googledrive.com/host/0B9QyOqpKYA2gdGV2aGFRMWh4aXM/style.css" />-->
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<title>University of Pennsylvania iGEM</title>
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<link href='http://fonts.googleapis.com/css?family=Open+Sans' rel='stylesheet' type='text/css'>
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</div>
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</head>
  
<h4>Before you start: </h4>
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<style type="text/css">
<p> Please read the following pages:</p>
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@import url(http://fonts.googleapis.com/css?family=Oswald:300,400,700);
<ul>
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@import url(http://fonts.googleapis.com/css?family=Source+Sans+Pro:200,300,400,600,700,900,200italic,300italic,400italic,600italic,700italic,900italic);
<li>  <a href="https://2015.igem.org/Requirements">Requirements page </a> </li>
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<li> <a href="https://2015.igem.org/Wiki_How-To">Wiki Requirements page</a></li>
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</ul>
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<div class="highlightBox">
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/* Override UGG site */
<h4> Styling your wiki </h4>
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#main {width: 100%; padding:0;}
<p>You may style this page as you like or you can simply leave the style as it is. You can easily keep the styling and edit the content of these default wiki pages with your project information and completely fulfill the requirement to document your project.</p>
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.content-asset p {margin:0 auto;}
<p>While you may not win Best Wiki with this styling, your team is still eligible for all other awards. This default wiki meets the requirements, it improves navigability and ease of use for visitors, and you should not feel it is necessary to style beyond what has been provided.</p>  
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.breadcrumb {display:none;}
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/* Helpers */
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/**************************/
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.margin-top-10 {padding-top:10px;}
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.margin-bot-10 {padding-bottom:10px;}
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/* Typography */
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/**************************/
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#parallax-world-of-ugg h1 {font-family:'Oswald', sans-serif; font-size:100px; font-weight:600; text-transform: uppercase; color:black; padding:10px; margin:0;}
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#parallax-world-of-ugg h2 {font-family:'Oswald', sans-serif; font-size:70px; letter-spacing:10px; text-align:center; color:white; font-weight:400; text-transform:uppercase; z-index:10; opacity:.8;}
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#parallax-world-of-ugg h3 {font-family:'Oswald', sans-serif; font-size:14px; line-height:0; font-weight:400; letter-spacing:8px; text-transform: uppercase; color:black;}
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#parallax-world-of-ugg p {font-family:'Source Sans Pro', sans-serif; font-weight:400; font-size:18px; line-height:24px;}
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.first-character {font-weight:400; float: left; font-size: 84px; line-height: 64px; padding-top: 4px; padding-right: 8px; padding-left: 3px; font-family: 'Source Sans Pro', sans-serif;}
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.sc {color: #3b8595;}
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.ny {color: #3d3c3a;}
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.atw {color: #c48660;}
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/* Section - Title */
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/**************************/
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#parallax-world-of-ugg .title {background: white; padding: 20px; margin:0 auto; text-align:center;}
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#parallax-world-of-ugg .title h1 {font-size:35px; letter-spacing:8px;}
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/* Section - Block */
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/**************************/
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#parallax-world-of-ugg .block {background: white; padding: 60px; width:1200px; margin:0 auto; text-align:justify;}
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#parallax-world-of-ugg .block-gray {background: #f2f2f2;padding: 60px;}
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#parallax-world-of-ugg .section-overlay-mask {position: absolute; top: 0; left: 0; width: 100%; height: 100%; background-color: black; opacity: 0.70;}
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/* Section - Block2 */
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/**************************/
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#parallax-world-of-ugg .block2 {background: white; padding: 60px; width:800px; margin:0 auto; text-align:justify;}
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#parallax-world-of-ugg .block2-gray {background: #f2f2f2;padding: 60px;}
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#parallax-world-of-ugg .section-overlay-mask {position: absolute; top: 0; left: 0; width: 100%; height: 100%; background-color: black; opacity: 0.70;}
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/* Section - Parallax */
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/**************************/
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#parallax-world-of-ugg .parallax-one {padding-top: 200px; padding-bottom: 200px; overflow: hidden; position: relative; width: 100%; background-image: url(https://static.igem.org/mediawiki/2015/0/06/Bulb-in-the-sunset-light-hd-background.jpg); background-attachment: fixed; background-size: cover; -moz-background-size: cover; -webkit-background-size: cover; background-repeat: no-repeat; background-position: top center;}
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#parallax-world-of-ugg .parallax-two {padding-top: 200px; padding-bottom: 200px; overflow: hidden; position: relative; width: 100%; background-image: url(https://static.igem.org/mediawiki/2015/0/07/Light.jpg); background-attachment: fixed; background-size: cover; -moz-background-size: cover; -webkit-background-size: cover; background-repeat: no-repeat; background-position: center center;}
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#parallax-world-of-ugg .parallax-three {padding-top: 200px; padding-bottom: 200px; overflow: hidden; position: relative; width: 100%; background-image: url(https://static.igem.org/mediawiki/2015/d/df/Communciation.jpg); background-attachment: fixed; background-size: cover; -moz-background-size: cover; -webkit-background-size: cover; background-repeat: no-repeat; background-position: center center;}
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/* Extras */
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/**************************/
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#parallax-world-of-ugg .line-break {border-bottom:1px solid black; width: 150px; margin:0 auto;}
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/* Media Queries */
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/**************************/
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@media screen and (max-width: 959px) and (min-width: 768px) {
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  #parallax-world-of-ugg .block {padding: 40px; width:620px;}
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}
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@media screen and (max-width: 767px) {
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  #parallax-world-of-ugg .block {padding: 30px; width:420px;}
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  #parallax-world-of-ugg h2 {font-size:30px;}
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  #parallax-world-of-ugg .block {padding: 30px;}
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  #parallax-world-of-ugg .parallax-one, #parallax-world-of-ugg .parallax-two, #parallax-world-of-ugg .parallax-three {padding-top:100px; padding-bottom:100px;}
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}
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@media screen and (max-width: 479px) {
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  #parallax-world-of-ugg .block {padding: 30px 15px; width:290px;}
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}
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</style>
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<div id="parallax-world-of-ugg">
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<div class="boxed">
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<div><img src="https://static.igem.org/mediawiki/2015/d/d4/Pennigem_mainbanner_15_%281%29.png" width="100%" alt></div>
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<section>  
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<div class="title">
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<h1>OUR PROJECT</h1>
 
</div>
 
</div>
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</section>
  
<h4> Editing your wiki </h4>
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<table align="center">
<p>On this page you can document your project, introduce your team members, document your progress and share your iGEM experience with the rest of the world! </p>
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<p> <a href="https://2015.igem.org/wiki/index.php?title=Team:Penn&action=edit"> Click here to edit this page! </a></p>
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<p>See tips on how to edit your wiki on the <a href="https://2015.igem.org/TemplatesforTeams_Code_Documentation">Template Documentation</a> page.</p>  
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<tr>
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<td>
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<img src="https://static.igem.org/mediawiki/2015/9/9d/Photocoupler2015Penn.png" alt />
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</td>
  
<h4>Templates </h4>
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<td>
<p> This year we have created templates for teams to use freely. More information on how to use and edit the templates can be found on the
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<div class="block2">
<a href="https://2015.igem.org/TemplatesforTeams_Code_Documentation">Template Documentation </a> page.</p>  
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      <p> Communication between cells is instrumental in coordinating population-level activity. In a process known as "quorum sensing," bacteria both secrete and sense autoinducer signaling molecules to enable synchronization of group gene expression paradigms. The synthetic biology community has rapidly adopted these quorum signaling pathways for use in programmed circuitry. However, chemical signals must diffuse between sender and receiver cells, limiting such communication to a common environment. In electronics, when electrical signals must be transferred between two circuits operating at incompatible voltages, electrical engineers use optocouplers, components that transfer information between isolated circuits via light. The 2015 Penn iGEM team presents a biological analog of the optocoupler, a cell-to-cell communication system in which a "sender" cell generates light via bioluminesence and a "receiver" cell expresses photoreceptors to enable light-dependent physiological responses. We show that light elicits a response in light-sensitive receivers and illuminated potential applications for this alternative form of cell communication.</p>
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</div>
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</td>
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</tr>
  
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</table>
  
<h4>Tips</h4>
 
<p>This wiki will be your team’s first interaction with the rest of the world, so here are a few tips to help you get started: </p>
 
<ul>
 
<li>State your accomplishments! Tell people what you have achieved from the start. </li>
 
<li>Be clear about what you are doing and how you plan to do this.</li>
 
<li>You have a global audience! Consider the different backgrounds that your users come from.</li>
 
<li>Make sure information is easy to find; nothing should be more than 3 clicks away.  </li>
 
<li>Avoid using very small fonts and low contrast colors; information should be easy to read.  </li>
 
<li>Start documenting your project as early as possible; don’t leave anything to the last minute before the Wiki Freeze. For a complete list of deadlines visit the <a href="https://2015.igem.org/Calendar_of_Events">iGEM 2015 calendar</a> </li>
 
<li>Have lots of fun! </li>
 
</ul>
 
  
  
<h4>Inspiration</h4>
 
<p> You can also view other team wikis for inspiration! Here are some examples:</p>
 
<ul>
 
<li> <a href="https://2014.igem.org/Team:SDU-Denmark/"> 2014 SDU Denmark </a> </li>
 
<li> <a href="https://2014.igem.org/Team:Aalto-Helsinki">2014 Aalto-Helsinki</a> </li>
 
<li> <a href="https://2014.igem.org/Team:LMU-Munich">2014 LMU-Munich</a> </li>
 
<li> <a href="https://2014.igem.org/Team:Michigan"> 2014 Michigan</a></li>
 
<li> <a href="https://2014.igem.org/Team:ITESM-Guadalajara">2014 ITESM-Guadalajara </a></li>
 
<li> <a href="https://2014.igem.org/Team:SCU-China"> 2014 SCU-China </a></li>
 
</ul>
 
  
<h4> Uploading pictures and files </h4>
 
<p> You can upload your pictures and files to the iGEM 2015 server. Remember to keep all your pictures and files within your team's namespace or at least include your team's name in the file name. <br />
 
When you upload, set the "Destination Filename" to <code>Team:YourOfficialTeamName/NameOfFile.jpg</code>. (If you don't do this, someone else might upload a different file with the same "Destination Filename", and your file would be erased!)</p>
 
  
<a href="https://2015.igem.org/Special:Upload">CLICK HERE TO UPLOAD FILES</a>
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<section>
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<div class="title">
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<h1>BREAKDOWN</h1>
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</div>
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</section>
  
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<table align = "center">
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<tr>
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<td width="33.33%"><a href="https://2015.igem.org/Team:Penn/Sender"><img id = "daicon" src="https://static.igem.org/mediawiki/2015/4/4b/Pennigem_sender_15.png" height="85%" width="85%"></a></td>
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<td width="33.33%"><a href="https://2015.igem.org/Team:Penn/Receiver"><img id = "daicon" src="https://static.igem.org/mediawiki/2015/c/c0/Pennigem_receiver_15.png" height="85%" width="85%"></a></td>
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<td width="33.33%"><a href="https://2015.igem.org/Team:Penn/Communication"><img id = "daicon" src="https://static.igem.org/mediawiki/2015/f/fc/Pennigem_comm_15.png" height="85%" width="85%"></a></td>
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</tr>
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</table>
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<br><br>
  
  
</div></div> <!--These are the closing tags for div id="mainContainer" and div id="contentContainer". The corresponding opening tags appear in the template that is {{included}} at the top of this page.-->
 
  
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<section>
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<div class="title">
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<h1>HUMAN PRACTICES</h1>
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</div>
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</section>
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<table align="center">
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<tr>
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<td>
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<a href="https://2015.igem.org/Team:Penn/Educational_Toolbox"><img src="https://static.igem.org/mediawiki/2015/c/c3/Whatwillstandasatransferfunctionfornow3.png"></a></td>
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<td>
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<div class="block2">
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      <p> Analagous to  our project goals, the Penn iGEM 2015 team has worked to further illuminate the parallels between genetic circuits and electrical circuits with the addition of the PennTunes Toolbox. Just as there is a distinct change in response when replacing an electric circuit component, the various genetic parts included in this toolbox clearly demonstrate the divergence in expression level due to a change in genetic part (promoter, RBS, etc). As an example, we have characterized one of the inverter strains in the toolbox that exhibits the relationship in the figure to the right.
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</p>
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<p>Our aim is to increase the reach of synthetic biology by providing the tools and infrastructure that will make biotechnology more accessible in educational settings. Find out more about our vision of the future for synthetic biology and biotechnology tools by clicking on the graph! </p>
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</div>
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</td>
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</tr>
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</table>
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<style type="text/css">
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body { margin: 0;}
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header {
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  padding: .5vw;
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  font-size: 0;
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  display: -ms-flexbox;
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  -ms-flex-wrap: wrap;
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  -ms-flex-direction: column;
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  -webkit-flex-flow: row wrap;
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  flex-flow: row wrap;
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  display: -webkit-box;
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  display: flex;
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}
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header div {
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  -webkit-box-flex: auto;
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  -ms-flex: auto;
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  flex: auto;
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  width: 200px;
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  margin: .5vw;
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}
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header div img {
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  width: 100%;
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  height: auto;
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}
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@media screen and (max-width: 400px) {
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  header div { margin: 0; }
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  header { padding: 0; }
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}
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</style>
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<section>
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<div class="title">
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<h1>Our Team</h1>
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</div>
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</section>
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<header>
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<div><img src="https://static.igem.org/mediawiki/2015/4/48/NikitaFrontPage.png" alt></div>
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<div><img src="https://static.igem.org/mediawiki/2015/8/86/HannahFrontPage.png" alt></div>
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<div><img src="https://static.igem.org/mediawiki/2015/a/a7/JaneFrontPage.png" alt></div>
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<div><img src="https://static.igem.org/mediawiki/2015/1/16/ShriramFrontPage.png" alt></div>
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<div><img src="https://static.igem.org/mediawiki/2015/e/e5/KarolFrontPage.png" alt></div>
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  <!-- images placed inside block elements to deal with a Firefox rendering bug affecting  scaled flexbox images -->
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</header>
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</div>
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</div>
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<div style = "background: url('https://static.igem.org/mediawiki/2015/e/e0/Footer.png'); position:inherit; height:250px; background-size: 100%; background-repeat: no-repeat; background-position:center top;">
 
</html>
 
</html>

Latest revision as of 19:40, 16 September 2015

University of Pennsylvania iGEM

OUR PROJECT

Communication between cells is instrumental in coordinating population-level activity. In a process known as "quorum sensing," bacteria both secrete and sense autoinducer signaling molecules to enable synchronization of group gene expression paradigms. The synthetic biology community has rapidly adopted these quorum signaling pathways for use in programmed circuitry. However, chemical signals must diffuse between sender and receiver cells, limiting such communication to a common environment. In electronics, when electrical signals must be transferred between two circuits operating at incompatible voltages, electrical engineers use optocouplers, components that transfer information between isolated circuits via light. The 2015 Penn iGEM team presents a biological analog of the optocoupler, a cell-to-cell communication system in which a "sender" cell generates light via bioluminesence and a "receiver" cell expresses photoreceptors to enable light-dependent physiological responses. We show that light elicits a response in light-sensitive receivers and illuminated potential applications for this alternative form of cell communication.

BREAKDOWN



HUMAN PRACTICES

Analagous to our project goals, the Penn iGEM 2015 team has worked to further illuminate the parallels between genetic circuits and electrical circuits with the addition of the PennTunes Toolbox. Just as there is a distinct change in response when replacing an electric circuit component, the various genetic parts included in this toolbox clearly demonstrate the divergence in expression level due to a change in genetic part (promoter, RBS, etc). As an example, we have characterized one of the inverter strains in the toolbox that exhibits the relationship in the figure to the right.

Our aim is to increase the reach of synthetic biology by providing the tools and infrastructure that will make biotechnology more accessible in educational settings. Find out more about our vision of the future for synthetic biology and biotechnology tools by clicking on the graph!

Our Team