Difference between revisions of "Team:Valencia UPV/Modeling/DetModel"

(Created page with "{{:Team:Valencia_UPV/Templates:headUPV}} {{:Team:Valencia_UPV/Templates:menuUPV}} <html> <!-- Banner --> <style> #banner{background-image: url("images/overlay.png"), u...")
 
Line 28: Line 28:
 
<section class="box">
 
<section class="box">
 
<header class="major">
 
<header class="major">
−
<h2>Section 1<br />
+
<h2>What is our circuit supposed to do?<br />
 
</h2><hr>
 
</h2><hr>
 
</header>
 
</header>
 
 
−
<p>Hello world</p>
+
<p>The idea of our circuit can be simply represented by this picture:</p>
 +
 
 +
<p><div style="text-align:left;"><img width=400em src="https://static.igem.org/mediawiki/2015/9/9a/Valencia_upv_overviewcircuito.png" ></div></p>
 +
 
 +
<p><div style="text-align:left;"><h5><b>Figure 1. Black box diagram.</b></h5></div></p>
 +
 
 +
 
 +
<p>Basically, our aim is the biological design of a decoder that only expresses the codified genetic information when, where and which is desired by the user. This would be the truth table of our circuit:</p>
 +
 
 +
<p><div style="text-align:right;"><img width=600em src="https://static.igem.org/mediawiki/2015/thumb/7/7f/Valencia_upv_truetable.png/798px-Valencia_upv_truetable.png
 +
" ></div></p>
 +
 
 +
<p> <div style="text-align:right;"><h5><b>Figure 2. Truth table of our circuit.</b></h5></div></p>
 +
 
 +
 
 +
<p>The biological components that allow us this implementation in living organisms are two switches, two recombinases and a library of different binding domains. All those elements have been coordinated in this cascade of three different levels:</p>
 +
 
 +
<p><div style="text-align:center;"><img width=450em src="https://static.igem.org/mediawiki/2015/thumb/5/5f/Valencia_upv_circuit.png/800px-Valencia_upv_circuit.png
 +
" ></div></p>
 +
 
 +
<p><div style="text-align:center;"><h5><b>Figure 3. Our biological circuit separated in its three levels.</b></h5></div></p>
 +
 
 +
<p><div style="text-align:center;"><img width=175em src="https://static.igem.org/mediawiki/2015/f/f8/Valencia_upv_tablecomponents.png
 +
" ><img width=200em src="https://static.igem.org/mediawiki/2015/2/2a/Valencia_upv_tablecomponents2.png
 +
" ></div></p>
 +
<p><div style="text-align:center;"><h5><b>Figure 4. Elements of our circuit. Real name (Model name) | Graphic representations.</b></h5></div></p>
 +
 
 +
<p>In order to predict the results of our biological circuit, we must be able to express its performance in numerical terms. Using Mass Action Kinetics we got our deterministic model with all its equations describing interactions between all elements of the circuit.
 +
</p>
  
 
<br/>
 
<br/>
 
 
−
<header id="scrollsect1" class="major">
+
−
<h3 style="text-align:left">Sub section 1<br />
+
−
</h3>
+
−
</header>
+
−
+
−
<p>Hello world</p>
+
 
 
 
</section>
 
</section>

Revision as of 00:27, 18 September 2015

Valencia UPV iGEM 2015

What is our circuit supposed to do?

The idea of our circuit can be simply represented by this picture:

Figure 1. Black box diagram.

Basically, our aim is the biological design of a decoder that only expresses the codified genetic information when, where and which is desired by the user. This would be the truth table of our circuit:

Figure 2. Truth table of our circuit.

The biological components that allow us this implementation in living organisms are two switches, two recombinases and a library of different binding domains. All those elements have been coordinated in this cascade of three different levels:

Figure 3. Our biological circuit separated in its three levels.

Figure 4. Elements of our circuit. Real name (Model name) | Graphic representations.

In order to predict the results of our biological circuit, we must be able to express its performance in numerical terms. Using Mass Action Kinetics we got our deterministic model with all its equations describing interactions between all elements of the circuit.