Difference between revisions of "Team:IONIS Paris/Project/Game Over"

 
(29 intermediate revisions by 2 users not shown)
Line 25: Line 25:
  
 
<!-- Header Starts -->
 
<!-- Header Starts -->
−
<div class="banner row" id="banner" style="width:101%">
+
<div class="banner row" id="banner" style="width:101%;min-height:100%;height: 100vh; ">
−
<div class="parallax text-center" style="background-image: url(https://static.igem.org/mediawiki/2015/0/07/Game_over.jpg)">
+
<div class="parallax text-center" style="background-image: url(https://static.igem.org/mediawiki/2015/0/07/Game_over.jpg);min-height:100%;">
−
<div class="parallax-pattern-overlay">
+
<div class="parallax-pattern-overlay" style="min-height:100%;height: 100vh;">
−
<div class="container text-center" style="height:650px;padding-top:200px;">
+
<div class="container text-center" style="min-height:100%;padding-top:200px;">
 
<h1 class="intro wow zoomIn" wow-data-delay="0.4s" wow-data-duration="0.9s"  style="font-family:sans-serif; color:#B00000 " >Game over</h1>
 
<h1 class="intro wow zoomIn" wow-data-delay="0.4s" wow-data-duration="0.9s"  style="font-family:sans-serif; color:#B00000 " >Game over</h1>
 
</div>
 
</div>
Line 41: Line 41:
 
<h4  class="wowload fadeInUp"><i class="fa fa-lightbulb-o" style="color:#b22222"></i> Allowing the end of the game </h4>
 
<h4  class="wowload fadeInUp"><i class="fa fa-lightbulb-o" style="color:#b22222"></i> Allowing the end of the game </h4>
 
<div class="col-sm-6 wowload fadeInLeft">
 
<div class="col-sm-6 wowload fadeInLeft">
−
<p align="justify"> The game over concerns the end of one round in the Bioconsole game.<br>
+
<p align="justify"> The game over concerns the end of one round in the Bio-Console game.<br>
−
Indeed, you can not play indefinitely with the Bioconsole, and as every funny game something can happen to the hero!
+
Indeed, you can not play indefinitely with the Bio-Console, and as every funny game something can happen to the hero!
 
Here, the end of the game is the death of the bacteria. </p>
 
Here, the end of the game is the death of the bacteria. </p>
 
<p align="justify"> As you know, the goal of the game is simple:  to allow BACT'Man to survive as long as possible. Stop him from getting in contact with the virtual lasers that will appear faster and faster as the game goes on. If BACT'Man were to be touched, a bright flash will appear at the microscope and will activate the liposomes opening.
 
<p align="justify"> As you know, the goal of the game is simple:  to allow BACT'Man to survive as long as possible. Stop him from getting in contact with the virtual lasers that will appear faster and faster as the game goes on. If BACT'Man were to be touched, a bright flash will appear at the microscope and will activate the liposomes opening.
−
The toxins will eliminate our hero that will lose his fluorescence ... GAME OVER
+
The toxins will eliminate our hero that will lose his fluorescence or bioluminescence ... GAME OVER
 
<br>
 
<br>
 
Our game over is composed of two parts : Toxin-mediated delivery by photopolymerizable liposomes , clean-up of the microfluidic channel.
 
Our game over is composed of two parts : Toxin-mediated delivery by photopolymerizable liposomes , clean-up of the microfluidic channel.
Line 52: Line 52:
 
</div>
 
</div>
 
<div class="col-sm-6 wowload fadeInRight">
 
<div class="col-sm-6 wowload fadeInRight">
−
<center>
+
<center><br><br>
−
<img src="https://static.igem.org/mediawiki/2015/7/75/Parc.png" alt="parc" width="200" height=auto/>
+
<img src="https://static.igem.org/mediawiki/2015/8/87/Bioconsole_wiki.png" alt="parc" width="90%" height=auto/></center>
 
</div>
 
</div>
 
</div>
 
</div>
Line 72: Line 72:
 
</div>
 
</div>
 
<div class="col-sm-6 wowload fadeInRight">
 
<div class="col-sm-6 wowload fadeInRight">
−
<h4><i class="fa fa-circle-o" style="color:#b22222"></i> Toxin-mediated delivery toxins </h4>
+
<h4><i class="fa fa-circle-o" style="color:#b22222"></i> Toxin-mediated delivery </h4>
 
<p align="justify">  
 
<p align="justify">  
 
In order to kill our bacteria which would imply the end of the game, we thought to use liposomes as toxin-mediated delivery. The idea is to create a bubble into the microfluidic chip containing the bacteria and the liposomes. As a result, when the bubble would touch the lasers, the liposomes would free up toxins that would kill the bacteria afterwards.  
 
In order to kill our bacteria which would imply the end of the game, we thought to use liposomes as toxin-mediated delivery. The idea is to create a bubble into the microfluidic chip containing the bacteria and the liposomes. As a result, when the bubble would touch the lasers, the liposomes would free up toxins that would kill the bacteria afterwards.  
Line 78: Line 78:
 
<p align="justify">
 
<p align="justify">
 
For this to be possible, we wanted to use photopolymerizable liposomes. The latter composed of photopolymerizable phospholipid (DC8,9PC) would release entrapped toxins upon visible light treatment (The photopolymerization occurs at 514 nm).  
 
For this to be possible, we wanted to use photopolymerizable liposomes. The latter composed of photopolymerizable phospholipid (DC8,9PC) would release entrapped toxins upon visible light treatment (The photopolymerization occurs at 514 nm).  
−
Liposomes prepared from DC8,9PC alone form tube like structures that are not suitable for molecule entrapment, therefore, we thought to make a formulation containing a mixture of lipids (<a href="#" style="text-decoration:none">VIEW PROTOCOLE</a>) .
+
Liposomes prepared from DC8,9PC alone form tube like structures that are not suitable for molecule entrapment, therefore, we thought to make a formulation containing a mixture of lipids.
 
<br>
 
<br>
−
In order to ensure a functional liposomes, we took as reference the article written by Yavlovich et al. (2011) entitled  “A Novel class of Photo-triggerable liposomes containing DPPC:DC8,9PC as Vehicles for Delivery of Doxorubcin to Cells”.  
+
In order to ensure functional liposomes, we took as reference the article written by Yavlovich et al. (2011) entitled  “A Novel class of Photo-triggerable liposomes containing DPPC:DC8,9PC as Vehicles for Delivery of Doxorubcin to Cells”.  
 
</p>  
 
</p>  
 
</div>
 
</div>
Line 88: Line 88:
 
<h4><i class="fa fa-times-circle-o" style="color:#b22222"></i>  BactMan - Game Over  </h4>
 
<h4><i class="fa fa-times-circle-o" style="color:#b22222"></i>  BactMan - Game Over  </h4>
 
<p align="justify" >  
 
<p align="justify" >  
−
Because of a time issue, we did not have enough time to synthesize the liposome and therefore test the first part of our game over.  
+
Because of a time issue, we did not synthesize the liposomes and therefore test the first part of our game over.  
−
According Yavlovich’s paper and if we follow carefully its liposome formation protocol, this system has a high probability to work efficiently.  
+
According to Yavlovich’s paper and if we follow carefully its liposome formation protocol, this system has a high probability to work efficiently.  
 
<br><br>
 
<br><br>
−
Nevertheless, visible-light induced solute leakage from the liposome and depends on the spectral properties of entrapped solutes. As we did not test the liposome with the toxins, we cannot say if the leakage will be important or not. In any case, we do not really have to worry about it since we play upon red light.  
+
Nevertheless, visible-light induced solute leakage from the liposome depends on the spectral properties of entrapped solutes. As we did not test the liposomes with the toxins, we cannot say if the leakage will be important or not. In any case, we do not really have to worry about it since we play upon red light.  
 
</p>
 
</p>
 
</div>
 
</div>
Line 124: Line 124:
 
</div>
 
</div>
 
 
 +
 +
<div id="about"  class="container spacer about" >
 +
<h4> References </h4>
 +
<p align="justify" style="font-size:14px">
 +
<i class="fa fa-angle-right"></i> Yavlovich A, Singh A, Blumenthal R, Puri A. A novel class of photo-triggerable liposomes containing DPPC:DC 8,9PC as vehicles for delivery of doxorubcin to cells. Biochim Biophys Acta - Biomembr. 2011;1808(1):117–26.
 +
<br>
 +
 +
</p>
 +
 +
</div>
 
 
 
<!--BOXES -->
 
<!--BOXES -->
 
<div id="works"  class=" clearfix grid">  
 
<div id="works"  class=" clearfix grid">  
  
−
<figure class="effect-oscar wowload fadeInUp" >
+
<figure class="effect-oscar" >
 
<img src="https://static.igem.org/mediawiki/2015/3/34/Wii.jpg" alt="img01"/>
 
<img src="https://static.igem.org/mediawiki/2015/3/34/Wii.jpg" alt="img01"/>
−
<a href="https://2015.igem.org/Team:IONIS_Paris/Project" >
+
<a href="https://2015.igem.org/Team:IONIS_Paris/Description" >
 
<figcaption>
 
<figcaption>
 
<h2>PROJECT</h2>
 
<h2>PROJECT</h2>
Line 139: Line 149:
 
</figure>
 
</figure>
  
−
<figure class="effect-oscar wowload fadeInUp">
+
<figure class="effect-oscar">
 
<img src="https://static.igem.org/mediawiki/2015/thumb/1/18/Brick-wall.png/800px-Brick-wall.png" alt="team"/>
 
<img src="https://static.igem.org/mediawiki/2015/thumb/1/18/Brick-wall.png/800px-Brick-wall.png" alt="team"/>
 
<a href="https://2015.igem.org/Team:IONIS_Paris/Biobricks" >
 
<a href="https://2015.igem.org/Team:IONIS_Paris/Biobricks" >
Line 150: Line 160:
 
</figure>
 
</figure>
  
−
<figure class="effect-oscar wowload fadeInUp">
+
<figure class="effect-oscar">
 
<img src="https://static.igem.org/mediawiki/2015/1/18/GRID.jpg" alt="team"/>
 
<img src="https://static.igem.org/mediawiki/2015/1/18/GRID.jpg" alt="team"/>
 
<a href="https://2015.igem.org/Team:IONIS_Paris/Project/Microfluidics" >
 
<a href="https://2015.igem.org/Team:IONIS_Paris/Project/Microfluidics" >
 
<figcaption>
 
<figcaption>
 
<h2>MICROFLUIDICS</h2>
 
<h2>MICROFLUIDICS</h2>
−
<p>Our challenge in achieving the Bio-console<br>
+
<p>Our challenge in achieving the Bio-Console<br>
 
</p>             
 
</p>             
 
</figcaption>
 
</figcaption>

Latest revision as of 00:01, 19 September 2015

Game Over

What is the Game Over?

Allowing the end of the game

The game over concerns the end of one round in the Bio-Console game.
Indeed, you can not play indefinitely with the Bio-Console, and as every funny game something can happen to the hero! Here, the end of the game is the death of the bacteria.

As you know, the goal of the game is simple: to allow BACT'Man to survive as long as possible. Stop him from getting in contact with the virtual lasers that will appear faster and faster as the game goes on. If BACT'Man were to be touched, a bright flash will appear at the microscope and will activate the liposomes opening. The toxins will eliminate our hero that will lose his fluorescence or bioluminescence ... GAME OVER
Our game over is composed of two parts : Toxin-mediated delivery by photopolymerizable liposomes , clean-up of the microfluidic channel.



parc

Photopolymerizable liposome




Liposome

Toxin-mediated delivery

In order to kill our bacteria which would imply the end of the game, we thought to use liposomes as toxin-mediated delivery. The idea is to create a bubble into the microfluidic chip containing the bacteria and the liposomes. As a result, when the bubble would touch the lasers, the liposomes would free up toxins that would kill the bacteria afterwards.

For this to be possible, we wanted to use photopolymerizable liposomes. The latter composed of photopolymerizable phospholipid (DC8,9PC) would release entrapped toxins upon visible light treatment (The photopolymerization occurs at 514 nm). Liposomes prepared from DC8,9PC alone form tube like structures that are not suitable for molecule entrapment, therefore, we thought to make a formulation containing a mixture of lipids.
In order to ensure functional liposomes, we took as reference the article written by Yavlovich et al. (2011) entitled “A Novel class of Photo-triggerable liposomes containing DPPC:DC8,9PC as Vehicles for Delivery of Doxorubcin to Cells”.

BactMan - Game Over

Because of a time issue, we did not synthesize the liposomes and therefore test the first part of our game over. According to Yavlovich’s paper and if we follow carefully its liposome formation protocol, this system has a high probability to work efficiently.

Nevertheless, visible-light induced solute leakage from the liposome depends on the spectral properties of entrapped solutes. As we did not test the liposomes with the toxins, we cannot say if the leakage will be important or not. In any case, we do not really have to worry about it since we play upon red light.




Light signals

Liposomes

Bio-Console

Game over

References

Yavlovich A, Singh A, Blumenthal R, Puri A. A novel class of photo-triggerable liposomes containing DPPC:DC 8,9PC as vehicles for delivery of doxorubcin to cells. Biochim Biophys Acta - Biomembr. 2011;1808(1):117–26.

img01

PROJECT

BactMan's Adventures
team

BIOBRICKS

Our parts of DNA
team

MICROFLUIDICS

Our challenge in achieving the Bio-Console



IONIS Paris team. 2015 Edition