Difference between revisions of "Team:HFUT-China"

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{{HFUT-China}}
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<html lang="en">
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<html>
+
−
<h2> Welcome to iGEM 2015! </h2>
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−
<p>Your team has been approved and you are ready to start the iGEM season! </p>
+
  
−
<h4>Before you start: </h4>
+
<head>
−
<p> Please read the following pages:</p>
+
    <meta charset="UTF-8">
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<ul>
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    <meta name="viewport" content="width=device-width, height=device-height, initial-scale=1">
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<li> <a href="https://2015.igem.org/Requirements">Requirements page </a> </li>
+
    <title>HFUT-China</title>
−
<li> <a href="https://2015.igem.org/Wiki_How-To">Wiki Requirements page</a></li>
+
    <link rel="stylesheet" type="text/css" href="https://2015.igem.org/Team:HFUT-China/indexcss?action=raw&ctype=text/css">
−
</ul>
+
    <link rel="stylesheet" type="text/css" href="https://2015.igem.org/Team:HFUT-China/ghcss?action=raw&ctype=text/css">
 +
    <link rel="stylesheet" type="text/css" href="https://2015.igem.org/Team:HFUT-China/bootstrapcss?action=raw&ctype=text/css">
 +
    <link rel="stylesheet" type="text/css" href="https://2015.igem.org/Team:HFUT-China/onepagecss?action=raw&ctype=text/css">
 +
    <script type="text/javascript" src="https://2015.igem.org/Team:HFUT-China/jqjs?
 +
action=raw&ctype=text/javascript"></script>
 +
    <script type="text/javascript" src="https://2015.igem.org/Team:HFUT-China/btsjs?
 +
action=raw&ctype=text/javascript"></script>
 +
    <script type="text/javascript" src="https://2015.igem.org/Team:HFUT-China/onepagejs?
 +
action=raw&ctype=text/javascript"></script>
 +
    <script type="text/javascript" src="https://2015.igem.org/Team:HFUT-China/snapsvg?
 +
action=raw&ctype=text/javascript"></script>
 +
    <script>
 +
    if ($('.firstHeading')) $('.firstHeading').remove();
 +
    </script>
 +
    <style>
 +
    #contentSub,
 +
    #contentcontainer,
 +
    #footer-box,
 +
    #sitesub,
 +
    #catlinks,
 +
    #search-controls,
 +
    #p-logo,
 +
    .h3,
 +
    .printfooter,
 +
    .firstHeading,
 +
    .visualClear {
 +
        display: none;
 +
    }
 +
    /*-- hides default wiki settings --*/
 +
   
 +
    #globalWrapper,
 +
    #content {
 +
        width: 100%;
 +
        height: 100%;
 +
        border: 0px;
 +
        background-color: transparent;
 +
        margin: 0px;
 +
        padding: 0px;
 +
    }
 +
    #bodyContent, #mw-content-text {
 +
        width: 100%;
 +
        height: 100%;
 +
line-height:normal;
 +
    }
 +
    /*
 +
#bodyContent h1, #bodyContent h2, #bodyContent h3, #bodyContent h4, #bodyContent h5, #bodyContent h6 {
 +
border-bottom: none;
 +
padding-top: 0;
 +
padding-bottom: 0;
 +
margin-bottom: 0;
 +
}
 +
#bodyContent p {
 +
font-size: 100%;
 +
line-height: 1em;
 +
}
 +
#bodyContent li {
 +
margin-bottom: 0;
 +
}
 +
#bodyContent a {
 +
font-size: 100%;
 +
}*/
 +
    </style>
 +
</head>
  
−
<div class="highlightBox">
+
<body>
−
<h4> Styling your wiki </h4>
+
    <nav id="globalheader" class="globalheader" role="navigation" aria-label="Global Navigation">
−
<p>You may style this page as you like or you can simply leave the style as it is. You can easily keep the styling and edit the content of these default wiki pages with your project information and completely fulfill the requirement to document your project.</p>
+
        <div id="gh-content" class="gh-content">
−
<p>While you may not win Best Wiki with this styling, your team is still eligible for all other awards. This default wiki meets the requirements, it improves navigability and ease of use for visitors, and you should not feel it is necessary to style beyond what has been provided.</p>  
+
            <ul class="gh-nav-list navbar-nav">
−
</div>
+
                <li class="gh-tab gh-tab-logo">
 +
                    <a href="https://2015.igem.org/Team:HFUT-China" class="gh-tab-link">
 +
                        <div class="gh-logo">
 +
                            <img src="https://static.igem.org/mediawiki/2015/e/eb/Logo_white_small.png" alt="35x35" class="img-rounded" style="width: 35px;height: 35px;">
 +
                        </div>
 +
                    </a>
 +
                </li>
 +
                <li class="gh-tab"><a href="https://2015.igem.org/Team:HFUT-China/Software" class="gh-tab-link">Software</a></li>
 +
                <li class="gh-tab"><a href="https://2015.igem.org/Team:HFUT-China/Design" class="gh-tab-link">Design</a></li>
 +
                <li class="gh-tab"><a href="https://2015.igem.org/Team:HFUT-China/Description" class="gh-tab-link">Description</a></li>
 +
                <li class="gh-tab"><a href="https://2015.igem.org/Team:HFUT-China/Documents" class="gh-tab-link">Documents</a></li>
 +
                <li class="gh-tab"><a href="https://2015.igem.org/Team:HFUT-China/Practices" class="gh-tab-link">Human Practices</a></li>
 +
                <li class="gh-tab"><a href="https://2015.igem.org/Team:HFUT-China/Collaborations" class="gh-tab-link">Collaborations</a></li>
 +
                <li class="gh-tab"><a href="https://2015.igem.org/Team:HFUT-China/Team" class="gh-tab-link">Team</a></li>
 +
                <li class="gh-tab"><a href="https://2015.igem.org/Team:HFUT-China/Attributions" class="gh-tab-link">Attributors</a></li>
 +
            </ul>
 +
            <!-- ul.gh-nav-list -->
 +
        </div>
 +
        <!-- div#gh-content -->
 +
    </nav>
 +
    <!-- nav#globalheader -->
 +
    <div class="container main">
 +
        <section class="intro brief">
 +
            <figure class="logo-back"></figure>
 +
            <div class="b-title">
 +
                <div class="title">BioDesigner</div>
 +
                <div class="slogn">All you want, right here</div>
 +
            </div>
 +
        </section>
 +
        <section class="intro desc">
 +
            <div class="desc jumbotron">
 +
                <div class="desc-title">What is BioDesigner</div>
 +
                <p class="desc-words">BioDesigner is a smart assistant tool for Synthetic Biology design. Helping Synthetic Biologists to make creative products is BioDesigner's purpose. With this idea, BioDesigner presents all valuable information to users. Also by improving BioBricks’ searching process, recommending practical BioBricks during the design process, and simulating Biobricks’ reaction process, BioDesigner leads Synthetic Biology design to a new level.</p>
 +
            </div>
 +
            <div class="img-logo">
 +
                <svg id="test" width="100%" height="100%" viewBox="0 0 200 200"></svg>
 +
            </div>
 +
        </section>
 +
        <section class="intro search">
 +
            <div class="search-anim">
 +
                <svg id="search" width="100%" height="100%" viewBox="0 0 500 500">
 +
                </svg>
 +
            </div>
 +
            <div class="func-desc jumbotron">
 +
                <div class="func-title">Search</div>
 +
                <div class="func-subtitle">Search BioBricks, but more than BioBricks</div>
 +
                <p class="func-words">Searching for a part is the most fundamental step in Synthetic Biology. With BioDesigner's powerful search tool, users can search parts by typing what they want, and the custom-built result will be presented to them. Besides, what BioDesigner can do is more than that. Lots of valuable information will also be presented to users, like basic information, especially parts quality evaluation score, as well as parts' related papers. By integrating lots of information together, users can get more than a BioBrick.</p>
 +
            </div>
 +
        </section>
 +
        <section class="intro recommend">
 +
            <div class="recommend-anim">
 +
                <svg id="recommend" width="100%" height="100%" viewBox="0 0 500 500">
 +
                </svg>
 +
            </div>
 +
            <div class="func-desc jumbotron">
 +
                <div class="func-title">Recommendation</div>
 +
                <div class="func-subtitle">Select in selection, not Search in ocean</div>
 +
                <p class="func-words">Selecting a part from tons of candidates is always a pain point to every Synthetic Biology researcher. BioDesigner is the assistant that can simplify this task. Based on users' current design, BioDesigner can narrow down the scope and provide useful parts as a recommendation to users. Also, by analyzing part's function, the recommendation will adjust to users’ design according to users’ specific function need. BioDesigner can also providing system level recommendation by showing users the relations between various proteins and genes. With BioDesigner’s fantastic recommendation function, selecting a part won't be that hard.</p>
 +
            </div>
 +
        </section>
 +
        <section class="intro simulation">
 +
            <div class="simu-anim">
 +
                <svg id="simulation" width="100%" height="100%" viewBox="0 0 500 500">
 +
                </svg>
 +
            </div>
 +
            <div class="simu-desc jumbotron">
 +
                <div class="simu-title">Simulation</div>
 +
                <div class="simu-subtitle">Tell how it works, before you do your works</div>
 +
                <p class="simu-words">Traditionally, testing a Synthetic Biology design is done by lots of biological experiments, which can be an extremely time-consuming process. By using SSA algorithm, BioDesigner can show users a glance of how the design will perform. With BioDesigner's interactive simulator, user can check the amount of a certain compound at any time, or during any time period.</p>
 +
            </div>
 +
        </section>
 +
    </div>
 +
    <!-- div.container-fluid -->
 +
    <script type="text/javascript">
 +
    window.image_index = 0;
 +
    window.total_image = 3;
 +
    </script>
 +
    <script type="text/javascript">
 +
    $(document).ready(function() {
  
−
<h4> Editing your wiki </h4>
+
        $('.main').onepage_scroll({
−
<p>On this page you can document your project, introduce your team members, document your progress and share your iGEM experience with the rest of the world! </p>  
+
            sectionContainer: "section",
−
<p> <a href="https://2015.igem.org/wiki/index.php?title=Team:HFUT-China&action=edit"> Click here to edit this page! </a></p>
+
            easing: "ease",
−
<p>See tips on how to edit your wiki on the <a href="https://2015.igem.org/TemplatesforTeams_Code_Documentation">Template Documentation</a> page.</p>  
+
            animationTime: 1000,
 +
            pagination: true,
 +
            afterMove: function(index) {
 +
                drawContent(index);
 +
            },
 +
            loop: false,
 +
            keyboard: true,
 +
            direction: "vertical"
 +
        })
 +
    });
 +
    </script>
 +
    <script type="text/javascript">
 +
    $(document).on({
 +
        click: function() {
 +
            window.image_index -= 1;
 +
            if (window.image_index < 0) {
 +
                window.image_index = window.total_image - 1;
 +
            }
 +
            var image_width = $('figure.project').width();
 +
            var new_width = image_width * window.image_index;
 +
            var pos_str = '-' + new_width + 'px 0px';
 +
            console.log(pos_str);
 +
            $('figure.project').css('background-position', pos_str);
 +
        }
 +
    }, 'button#left');
 +
    </script>
 +
    <script type="text/javascript">
 +
    $(document).on({
 +
        click: function() {
 +
            window.image_index += 1;
 +
            if (window.image_index >= window.total_image) {
 +
                window.image_index = 0;
 +
            }
 +
            var image_width = $('figure.project').width();
 +
            var new_width = image_width * window.image_index;
 +
            var pos_str = '-' + new_width + 'px 0px';
 +
            console.log(pos_str);
 +
            $('figure.project').css('background-position', pos_str);
 +
        }
 +
    }, 'button#right');
 +
    </script>
 +
    <script type="text/javascript">
 +
    function drawContent(index) {
 +
        if (index == 1) {} else if (index == 2) {
 +
            drawLogo();
 +
        } else if (index == 3) {
 +
            animate_search();
 +
        } else if (index == 4) {
 +
            animate_recommendation();
 +
        } else if (index == 5) {
 +
            animate_simulate();
 +
        }
 +
    }
 +
    </script>
 +
    <script type="text/javascript">
 +
    function drawSearch() {
  
 +
    }
 +
    </script>
 +
    <script type="text/javascript">
 +
    function drawLogo() {
 +
        var s = Snap('#test');
 +
        s.clear();
 +
        var path1 = s.path('M27.014,120.007c-10.25-0.183-17.187,7.394-17.066,16.297c0.098,6.935,5.523,13.152,12.199,14.747c6.874,1.639,13.909-1.388,17.399-7.665c0.741-1.344,1.518-1.735,2.992-1.731c16.309,0.054,32.618,0.064,48.929-0.008c1.657-0.005,2.524,0.444,3.34,1.918c3.516,6.372,10.816,9.386,17.763,7.511c6.847-1.848,12.005-8.626,11.812-15.52c-0.194-6.922-5.247-13.241-11.95-14.947c-6.913-1.755-14.021,1.145-17.527,7.374c-0.811,1.444-1.711,1.759-3.194,1.755c-16.388-0.037-32.774-0.042-49.162,0.004c-1.43,0.007-2.239-0.31-3.006-1.678C36.647,122.908,32.09,120.279,27.014,120.007z M55.312,69.361c0.203,0.152,0.354,0.22,0.441,0.337c2.129,2.763,4.324,5.478,6.328,8.332c0.502,0.714,0.683,1.916,0.509,2.793c-0.713,3.628,1.352,6.981,4.809,7.515c3.583,0.559,6.754-1.909,7.011-5.448c0.257-3.516-2.463-6.337-6.139-6.458c-0.688-0.024-1.639-0.141-1.996-0.588c-2.464-3.048-4.801-6.198-7.146-9.272c5.118-6.465,5.876-13.023,1.653-20.015c-0.29-0.48-0.107-1.576,0.267-2.085c2.03-2.738,4.266-5.332,6.278-8.086c1.065-1.46,1.935-1.931,3.878-1.285c8.596,2.837,17.725-2.468,19.888-11.325c2.206-9.052-3.742-17.634-13.488-19.446c-7.699-1.431-16.192,5.197-17.41,13.522c-0.635,4.353,0.549,8.231,2.947,11.804c-2.572,3.273-5.134,6.376-7.514,9.609c-0.994,1.349-1.823,1.697-3.524,1.175c-7.82-2.411-16.154,1.783-19.083,9.419c-2.895,7.544,0.432,16.141,7.694,19.717C45.607,71.99,50.522,71.729,55.312,69.361z M45.403,101.716c0.668,0.135,1.12,0.203,1.561,0.314c7.917,2.062,15.845,4.093,23.737,6.255c0.708,0.198,1.444,1.168,1.717,1.938c1.536,4.354,5.158,7.015,9.638,6.898c4.238-0.111,7.947-2.972,9.091-7.011c1.183-4.164-0.505-8.581-4.165-10.908c-3.705-2.355-8.286-1.895-11.834,1.004c-0.67,0.548-1.905,0.888-2.721,0.688c-7.65-1.881-15.257-3.952-22.912-5.832c-1.876-0.46-2.623-1.251-2.934-3.244c-1.299-8.387-9.561-14.011-18.171-12.6c-8.456,1.386-14.186,9.647-12.727,18.345c1.377,8.194,9.483,14.012,17.705,12.752C38.81,109.486,42.664,106.476,45.403,101.716z');
  
−
<h4>Templates </h4>
+
        path1.attr({
−
<p> This year we have created templates for teams to use freely. More information on how to use and edit the templates can be found on the
+
            id: "pathA",
−
<a href="https://2015.igem.org/TemplatesforTeams_Code_Documentation">Template Documentation </a> page.</p>
+
            fill: "none",
 +
            strokeWidth: "1",
 +
            stroke: "#002FA7",
 +
            strokeMiterLimit: "10",
 +
            strokeDasharray: "9 9",
 +
            strokeDashOffset: "988.01"
 +
        });
  
 +
        var len1 = path1.getTotalLength();
 +
        path1.attr({
 +
            stroke: '#002FA7',
 +
            strokeWidth: 1,
 +
            fill: 'none',
 +
            // Draw Path
 +
            "stroke-dasharray": len1 + " " + len1,
 +
            "stroke-dashoffset": len1
 +
        }).animate({
 +
            "stroke-dashoffset": 10
 +
        }, 2000, mina.easeout, function() {
 +
            path1.animate({
 +
                fill: '#000'
 +
            }, 1000);
 +
        });
 +
    }
 +
    </script>
 +
    <script type="text/javascript">
 +
    function animate_recommendation() {
 +
        var ss = Snap('#recommend');
 +
        ss.clear();
 +
        var first_image = ss.image('https://static.igem.org/mediawiki/2015/2/20/Blue_biobrick.png', 250, 500, 99, 174);
 +
        var second_image = ss.image('https://static.igem.org/mediawiki/2015/2/20/Blue_biobrick.png', -130, 184, 99, 174);
 +
        var recommend_image1 = ss.image('https://static.igem.org/mediawiki/2015/f/fd/Green_biobrick.png', 175, 75, 99, 174).attr({
 +
            'opacity': 0
 +
        });
 +
        var recommend_image2 = ss.image('https://static.igem.org/mediawiki/2015/0/08/Red_biobrick.png', 320, 75, 99, 174).attr({
 +
            'opacity': 0
 +
        });
 +
        first_image.animate({
 +
            y: 290
 +
        }, 1000, mina.easeout, function() {
 +
            second_image.animate({
 +
                x: 250
 +
            }, 1300, mina.easeout, function() {
 +
                recommend_image1.animate({
 +
                    'opacity': 1
 +
                }, 1000);
 +
                recommend_image2.animate({
 +
                    'opacity': 1
 +
                }, 700, function() {
 +
                    recommend_image1.animate({
 +
                        x: 250
 +
                    }, 1000);
 +
                    recommend_image2.animate({
 +
                        'opacity': 0
 +
                    }, 750);
 +
                });
 +
            });
 +
        });
 +
    }
 +
    </script>
 +
    <script type="text/javascript">
 +
    function animate_search() {
 +
        var ss = Snap('#search');
 +
        ss.clear();
 +
        var bb_image = ss.image('https://static.igem.org/mediawiki/2015/2/20/Blue_biobrick.png', 300, 410, 40, 70);
  
−
<h4>Tips</h4>
+
        var hook_image = ss.image('https://static.igem.org/mediawiki/2015/e/e8/Search_hook.png', 290, -153, 61, 153);
−
<p>This wiki will be your team’s first interaction with the rest of the world, so here are a few tips to help you get started: </p>
+
        var cloud_image = ss.image('https://static.igem.org/mediawiki/2015/8/87/Search_cloud.png', 250, 400, 144, 80);
−
<ul>
+
        var name_image = ss.image('https://static.igem.org/mediawiki/2015/8/86/Name.png', 300, 210, 50, 50).attr({
−
<li>State your accomplishments! Tell people what you have achieved from the start. </li>
+
            'opacity': 0
−
<li>Be clear about what you are doing and how you plan to do this.</li>
+
        });
−
<li>You have a global audience! Consider the different backgrounds that your users come from.</li>
+
        var paper_image = ss.image('https://static.igem.org/mediawiki/2015/b/b2/Paper.png', 300, 210, 50, 50).attr({
−
<li>Make sure information is easy to find; nothing should be more than 3 clicks away. </li>
+
            'opacity': 0
−
<li>Avoid using very small fonts and low contrast colors; information should be easy to read. </li>
+
        });
−
<li>Start documenting your project as early as possible; don’t leave anything to the last minute before the Wiki Freeze. For a complete list of deadlines visit the <a href="https://2015.igem.org/Calendar_of_Events">iGEM 2015 calendar</a> </li>
+
        var type_image = ss.image('https://static.igem.org/mediawiki/2015/5/5f/Type.png', 300, 210, 50, 50).attr({
−
<li>Have lots of fun! </li>
+
            'opacity': 0
−
</ul>  
+
        });
 +
        var desc_image = ss.image('https://static.igem.org/mediawiki/2015/8/85/DESC.png', 300, 210, 50, 50).attr({
 +
            'opacity': 0
 +
        });
 +
        hook_image.animate({
 +
            y: 300
 +
        }, 1000, mina.easeout, function() {
 +
            hook_image.animate({
 +
                y: 100
 +
            }, 1500);
 +
            bb_image.animate({
 +
                y: 210
 +
            }, 1500, function() {
 +
                name_image.animate({
 +
                    'opacity': 1,
 +
                    x: 230,
 +
                    y: 150,
 +
                    width: 65,
 +
                    height: 65
 +
                }, 1000);
 +
                paper_image.animate({
 +
                    'opacity': 1,
 +
                    x: 230,
 +
                    y: 270,
 +
                    width: 65,
 +
                    height: 65
 +
                }, 1000);
 +
                type_image.animate({
 +
                    'opacity': 1,
 +
                    x: 350,
 +
                    y: 150,
 +
                    width: 65,
 +
                    height: 65
 +
                }, 1000);
 +
                desc_image.animate({
 +
                    'opacity': 1,
 +
                    x: 350,
 +
                    y: 270,
 +
                    width: 65,
 +
                    height: 65
 +
                }, 1000);
 +
            });
 +
        })
 +
    }
 +
    </script>
 +
    <script type="text/javascript">
 +
    function animate_simulate() {
 +
        var ss = Snap('#simulation');
 +
        ss.clear();
 +
        var linex = ss.path('M395.667,349.333L416.501,357.666L395.5,366.625L395.5,359.5L73,359.5').attr({
 +
            fill: 'none',
 +
            stroke: '#000000',
 +
            strokeWidth: 5,
 +
            'stroke-linecap': 'round',
 +
            'stroke-linejoin': 'round',
 +
            'stroke-miterlimit': 10,
 +
            strokeDasharray: "9 9",
 +
            strokeDashOffset: "988.01"
 +
        });
 +
        var liney = ss.path('M119.417,164.417L110.959,144.041L102.5,166.5L109.5,166.5L109.5,394').attr({
 +
            fill: 'none',
 +
            stroke: '#000000',
 +
            'stroke-width': 5,
 +
            'stroke-linecap': 'round',
 +
            'stroke-linejoin': 'round',
 +
            'stroke-miterlimit': 10,
 +
            strokeDasharray: "9 9",
 +
            strokeDashOffset: "988.01"
 +
        });
 +
        var line1 = ss.path('M136,172.094L196.699,295.088L256,311L315,321L376,327.667').attr({
 +
            fill: 'none',
 +
            stroke: '#5FAEFF',
 +
            'stroke-width': 7,
 +
            'stroke-linecap': 'round',
 +
            'stroke-linejoin': 'round',
 +
            'stroke-miterlimit': 10,
 +
            strokeDasharray: "9 9",
 +
            strokeDashOffset: "988.01"
 +
        });
 +
        var line2 = ss.path('M136,331.5L196.699,249.881L256,241.091L315,200.333L376,195').attr({
 +
            fill: 'none',
 +
            stroke: '#2FCE71',
 +
            'stroke-width': 7,
 +
            'stroke-linecap': 'round',
 +
            'stroke-linejoin': 'round',
 +
            'stroke-miterlimit': 10,
 +
            strokeDasharray: "9 9",
 +
            strokeDashOffset: "988.01"
 +
        });
 +
        var lenx = linex.getTotalLength();
 +
        var leny = liney.getTotalLength();
 +
        var len1 = line1.getTotalLength();
 +
        var len2 = line2.getTotalLength();
 +
        line1.attr({
 +
            "stroke-dasharray": len1 + " " + len1,
 +
            "stroke-dashoffset": len1
 +
        });
 +
        line2.attr({
 +
            "stroke-dasharray": len2 + " " + len2,
 +
            "stroke-dashoffset": len2
 +
        });
  
 +
        linex.attr({
 +
            stroke: '#000',
 +
            strokeWidth: 5,
  
−
<h4>Inspiration</h4>
+
            // Draw Path
−
<p> You can also view other team wikis for inspiration! Here are some examples:</p>
+
            "stroke-dasharray": lenx + " " + lenx,
−
<ul>
+
            "stroke-dashoffset": lenx
−
<li> <a href="https://2014.igem.org/Team:SDU-Denmark/"> 2014 SDU Denmark </a> </li>
+
        }).animate({
−
<li> <a href="https://2014.igem.org/Team:Aalto-Helsinki">2014 Aalto-Helsinki</a> </li>
+
            "stroke-dashoffset": 10
−
<li> <a href="https://2014.igem.org/Team:LMU-Munich">2014 LMU-Munich</a> </li>
+
        }, 2000, mina.easeout, function() {
−
<li> <a href="https://2014.igem.org/Team:Michigan"> 2014 Michigan</a></li>
+
−
<li> <a href="https://2014.igem.org/Team:ITESM-Guadalajara">2014 ITESM-Guadalajara </a></li>
+
−
<li> <a href="https://2014.igem.org/Team:SCU-China"> 2014 SCU-China </a></li>
+
−
</ul>
+
  
−
<h4> Uploading pictures and files </h4>
+
        });
−
<p> You can upload your pictures and files to the iGEM 2015 server. Remember to keep all your pictures and files within your team's namespace or at least include your team's name in the file name. <br />
+
        liney.attr({
−
When you upload, set the "Destination Filename" to <code>Team:YourOfficialTeamName/NameOfFile.jpg</code>. (If you don't do this, someone else might upload a different file with the same "Destination Filename", and your file would be erased!)</p>
+
            stroke: '#000',
 +
            strokeWidth: 5,
  
−
<a href="https://2015.igem.org/Special:Upload">CLICK HERE TO UPLOAD FILES</a>
+
            // Draw Path
 +
            "stroke-dasharray": leny + " " + leny,
 +
            "stroke-dashoffset": leny
 +
        }).animate({
 +
            "stroke-dashoffset": 10
 +
        }, 2000, mina.easeout, function() {
 +
            line1.attr({
 +
                stroke: '#5FAEFF',
 +
                strokeWidth: 7,
  
 +
                // Draw Path
 +
                "stroke-dasharray": len1 + " " + len1,
 +
                "stroke-dashoffset": len1
 +
            }).animate({
 +
                "stroke-dashoffset": 10
 +
            }, 2000, mina.easeout, function() {
 +
                line2.attr({
 +
                    stroke: '#2FCE71',
 +
                    strokeWidth: 7,
  
−
 
+
                    // Draw Path
−
</div></div> <!--These are the closing tags for div id="mainContainer" and div id="contentContainer". The corresponding opening tags appear in the template that is {{included}} at the top of this page.-->
+
                    "stroke-dasharray": len2 + " " + len2,
 +
                    "stroke-dashoffset": len2
 +
                }).animate({
 +
                    "stroke-dashoffset": 10
 +
                }, 2000, mina.easeout)
 +
            });
 +
        });
 +
    }
 +
    </script>
 +
</body>
  
 
</html>
 
</html>

Latest revision as of 00:36, 19 September 2015

HFUT-China

BioDesigner
All you want, right here
What is BioDesigner

BioDesigner is a smart assistant tool for Synthetic Biology design. Helping Synthetic Biologists to make creative products is BioDesigner's purpose. With this idea, BioDesigner presents all valuable information to users. Also by improving BioBricks’ searching process, recommending practical BioBricks during the design process, and simulating Biobricks’ reaction process, BioDesigner leads Synthetic Biology design to a new level.

Search
Search BioBricks, but more than BioBricks

Searching for a part is the most fundamental step in Synthetic Biology. With BioDesigner's powerful search tool, users can search parts by typing what they want, and the custom-built result will be presented to them. Besides, what BioDesigner can do is more than that. Lots of valuable information will also be presented to users, like basic information, especially parts quality evaluation score, as well as parts' related papers. By integrating lots of information together, users can get more than a BioBrick.

Recommendation
Select in selection, not Search in ocean

Selecting a part from tons of candidates is always a pain point to every Synthetic Biology researcher. BioDesigner is the assistant that can simplify this task. Based on users' current design, BioDesigner can narrow down the scope and provide useful parts as a recommendation to users. Also, by analyzing part's function, the recommendation will adjust to users’ design according to users’ specific function need. BioDesigner can also providing system level recommendation by showing users the relations between various proteins and genes. With BioDesigner’s fantastic recommendation function, selecting a part won't be that hard.

Simulation
Tell how it works, before you do your works

Traditionally, testing a Synthetic Biology design is done by lots of biological experiments, which can be an extremely time-consuming process. By using SSA algorithm, BioDesigner can show users a glance of how the design will perform. With BioDesigner's interactive simulator, user can check the amount of a certain compound at any time, or during any time period.