Difference between revisions of "Team:SJTU-Software/team"

 
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     <p class = "panelTitle"><b>About the team</b></p>
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     <p>This part is about our team
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     <p>SJTU is short for Shanghai JiaoTong University, one of the most famous universities in China. Known for its  abundant teaching resources and cutting-end scientific researching level. SJTU not only keep its edge on traditional advantage fields like naval architecture, engineering and electronic, but also make great progress in fields like life science, medicine, finance and so on.  Though the school of life science and biotechnology of SJTU does not has a long history, it has developed dramastically during these years, especially bioinformatics, which ranks first in China. <br/>
 +
    SJTU first had software team in 2014. This year, we have a brand-new software team: the 2015 SJTU software team. Our team is supported by the school of life science and biotechnology. Three professors of our this school became our mentors who helped us to organize the team and provided us with helpful advices. The team members are most from Bioinformatics. Some from the school of electronic, information and electrical engineering and one is from the school of media and design. The combination of students from different majors let our team be more creative and efficient. <br/>
 +
    We spend most of our time finishing the software in the bioinformatics computer room where we can use computer and Internet freely and close to mentors’ offices. Here we have some pictures about our daily work situation. Although the summer in Shanghai is hot and sometimes coding was boring and drove us crazy when we had to work 24/7 for the deadline. We still had so much fun this summer and finished our project finally!<br/><br/>
 
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          <li class = "membersNav" id = "mem1"><a href = "#Members" class = "scrollNav">Liu Liangjie</a></li>
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       <p class = "am-animation-fade">About the team(建议可以拍一些很好玩的照片，对于学校、组队的简单介绍)</br>
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        SJTU is short for Shanghai JiaoTong University, one of the most famous universities in China. Known for its  abundant teaching resources and cutting-end scientific researching level. SJTU not only keep its edge on traditional advantage fields like naval architecture, engineering and electronic, but also make great progress in fields like life science, medicine, finance and so on.  Though the school of life science and biotechnology of SJTU does not has a long history, it has developed dramastically during these years, especially bioinformatics, which ranks first in China.
+
−
SJTU first had software team in 2014. This year, we have a brand-new software team: the 2015 SJTU software team. Our team is supported by the school of life science and biotechnology. Three professors of our this school became our mentors who helped us to organize the team and provided us with helpful advices. The team members are most from Bioinformatics. Some from the school of electronic, information and electrical engineering and one is from the school of media and design. The combination of students from different majors let our team be more creative and efficient.
+
−
We spend most of our time finishing the software in the bioinformatics computer room where we can use computer and Internet freely and close to mentors’ offices. Here we have some pictures about our daily work situation. Although the summer in Shanghai is hot and sometimes coding was boring and drove us crazy when we had to work 24/7 for the deadline. We still had so much fun this summer and finished our project finally!
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      <p class = "mem1 am-animation-fade"><b>Liu Liangjie</b><br/>Liangjie Liu is a senior student majoring in bioinformatics and biostatistics in school of life science and biotechnology. He is the team leader of SJTU-Software.
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With the help of Jiabei Yang, the team leader of SJTU-Software 2014, he built up the team and made all members to work together. In this summer, he spent all time on the development of our project and is just like an overseer of the whole team. And he makes the schedule of the work.
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      <p class = "mem3 am-animation-fade"><b>Chen Ming</b><br/>Hi everyone, my name is Ming Chen. I am a senior student and my major is bioinformatics.  I find biology fascinating and especially synthetic biology. I took part in this competition last year as a member in wet lab. This year I wanna try the software thing. For me, I found iGEM more than a competition, but a complete process to make a group, come up with an idea, achieve it and sell it. Still, I love the concept of synthetic biology, crazy about interdisciplinary field of biology and math, information, physics and engineering. Competitions like iGEM gave me much more than school work and lab project. I really like it and highly recommend it. Hope everyone can enjoy their trip in iGEM!
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      <p class = "mem4 am-animation-fade"><b>Huang Wenze</b><br/>Wenze Huang is mainly responsible for the collection of data and the maintenance of database. He is a senior student who majors in bioinformatics and biostatistics in school of life science and biotechnology.
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Thanks to his bioinformatics background, he cooperates well with Qi Gao and Huamin zhang to set up the BASE database and assessment model.
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      <p class = "mem5 am-animation-fade"><b>Jin Jiajun</b><br/>Hello everyone, my chinese name is Jin Jiajun, and you can call me Gou Gou if you are willing to.
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In SJTU-Software, I am responsible for the website development of our software and wiki, considering of my major, computer science.
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While coding is a tedious and continual work, I really enjoy it because all of the team mates are fighting together to win the championship. That is absolutely inspiring. We attended a great number of meetings and discussed on the design of our website in order to improve its user experience. Of course, our instructor gave us valuable advice including how to use the server of our school.
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Now I am very excited to participate in the final competition in the United States. We are coming!
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      <p class = "mem6 am-animation-fade"><b>Chen Keyu</b><br/>My name is Chenkeyu, one of the SJTU software members. I will be a junior student in next semester. I’m major in computer science, I’ve learned coding ,mathematics, physics in my university life and I did PRP with mentors in our college.  
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This competition taught me that how important cooperation is. Different people do different tasks and then we put it together to accomplish a beautiful work. And in this process, communication is also very essential, that is why we have meetings every week to coordinate with each other. These two things will be very helpful in our future life.
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      <p class = "mem7 am-animation-fade"><b>Chen Jun</b><br/>My name is Jun Chen, or you can call me Bruce. I major in software engineering in Shanghai Jiaotong University. I feel happy to participate in the iGEM competition not only because I had a good time this summer, but because I also learned some fundamentals of synthetic biology. On one hand, I am not a man of biology, so I cannot say many useful words to the biology field and iGEM. One the other hand, I really find some problems in the (synthetic) biology. The good thing is that biology system is very similar to computer system. Both systems are built upon nonlives(well, you can say neurons or cells are alive) but can operate very efficiently. God and human beings both use modularity method to construct them. However, the bad thing is that biology is a newly-born science with shorter history. From data’s perspective, it’s a huge amount and lack effective management. Data needs to be stored orderly and integrally. From the scientific perspective, biology needs more laws and principles, like physics and chemistry, to explore the life. Biology is a science in nature, not an applied science. iGEM is good platform for biology, and I hope competitors can contribute more to this field and maybe some great findings will be born.
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    <div class = "amContent"><p class = "am-animation-fade">We would like to thank the following people who spare no efforts to help us and provide us with many precious advises.
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      <img src = "https://static.igem.org/mediawiki/2015/5/52/SJTU-SOFTWARE.bw13.png"/><br/>
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Chaochun Wei (associate professor, Ph.D. Supervisor,
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In 2006, he got a PhD in computer science in Washington University(St Louis). Research interests include gene structure prediction, identification of regulation module, models and algorithms in metagenomics and microbial genomics as well as GPU applied research in bioinformatics. Dr. Chaochun Wei has published a series of papers in PloS Biology, Genome Research, Bioinformatics, BMC Bioinformatics, PloS ONEand other international renowned academic journals with a totol impact factor over 80 and cited over 800 times.）
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Hongyu Ou（Microbiology professor and published 32 research papers in SCI. When he studied PhD, he developed a bacterial gene identification algorithm Zcurve, translated initation site prediction tools GS-Finder and essential gene database DEG. In his postdoctoral period in Britain, he studied pathogen genome.）
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Feng Chen（associate professor in SJTU, earned a doctorate degree with research fields in fermentation, extraction and purification of antibiotics, extraction,properties and biological degradation of fungal metabolites, food safety detection.）</p>
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    <div class = "asaContent"><p class = "am-animation-fade">The 2015 SJTU Software Team would like to thank everyone for their contributions. Especially the school of Life science and biotechnology, members of 2014 SJTU Software Team,  (合作的一些学校)</p>
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  <p>We would like to thank the following people who spare no efforts to help us and provide us with many precious advises.<br/>
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    Chaochun Wei (associate professor, Ph.D. Supervisor. <br/>
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    In 2006, he got a PhD in computer science in Washington University(St Louis). Research interests include gene structure prediction, identification of regulation module, models and algorithms in metagenomics and microbial genomics as well as GPU applied research in bioinformatics. Dr. Chaochun Wei has published a series of papers in PloS Biology, Genome Research, Bioinformatics, BMC Bioinformatics, PloS ONEand other international renowned academic journals with a totol impact factor over 80 and cited over 800 times.）<br/>
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    Hongyu Ou（Microbiology professor and published 32 research papers in SCI. When he studied PhD, he developed a bacterial gene identification algorithm Zcurve, translated initation site prediction tools GS-Finder and essential gene database DEG. In his postdoctoral period in Britain, he studied pathogen genome.）<br/>
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    Feng Chen（associate professor in SJTU, earned a doctorate degree with research fields in fermentation, extraction and purification of antibiotics, extraction,properties and biological degradation of fungal metabolites, food safety detection.）
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Latest revision as of 00:48, 19 September 2015

Team


About the team

SJTU is short for Shanghai JiaoTong University, one of the most famous universities in China. Known for its abundant teaching resources and cutting-end scientific researching level. SJTU not only keep its edge on traditional advantage fields like naval architecture, engineering and electronic, but also make great progress in fields like life science, medicine, finance and so on. Though the school of life science and biotechnology of SJTU does not has a long history, it has developed dramastically during these years, especially bioinformatics, which ranks first in China.
SJTU first had software team in 2014. This year, we have a brand-new software team: the 2015 SJTU software team. Our team is supported by the school of life science and biotechnology. Three professors of our this school became our mentors who helped us to organize the team and provided us with helpful advices. The team members are most from Bioinformatics. Some from the school of electronic, information and electrical engineering and one is from the school of media and design. The combination of students from different majors let our team be more creative and efficient.
We spend most of our time finishing the software in the bioinformatics computer room where we can use computer and Internet freely and close to mentors’ offices. Here we have some pictures about our daily work situation. Although the summer in Shanghai is hot and sometimes coding was boring and drove us crazy when we had to work 24/7 for the deadline. We still had so much fun this summer and finished our project finally!


Members

























Advisors&Mentors

We would like to thank the following people who spare no efforts to help us and provide us with many precious advises.
Chaochun Wei (associate professor, Ph.D. Supervisor.
In 2006, he got a PhD in computer science in Washington University(St Louis). Research interests include gene structure prediction, identification of regulation module, models and algorithms in metagenomics and microbial genomics as well as GPU applied research in bioinformatics. Dr. Chaochun Wei has published a series of papers in PloS Biology, Genome Research, Bioinformatics, BMC Bioinformatics, PloS ONEand other international renowned academic journals with a totol impact factor over 80 and cited over 800 times.）
Hongyu Ou（Microbiology professor and published 32 research papers in SCI. When he studied PhD, he developed a bacterial gene identification algorithm Zcurve, translated initation site prediction tools GS-Finder and essential gene database DEG. In his postdoctoral period in Britain, he studied pathogen genome.）
Feng Chen（associate professor in SJTU, earned a doctorate degree with research fields in fermentation, extraction and purification of antibiotics, extraction,properties and biological degradation of fungal metabolites, food safety detection.）