Difference between revisions of "Team:Santa Clara"

 
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<h2> Welcome to iGEM 2015! </h2>
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<p>Your team has been approved and you are ready to start the iGEM season! </p>
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<h4>Before you start: </h4>
 
<p> Please read the following pages:</p>
 
<ul>
 
<li>  <a href="https://2015.igem.org/Requirements">Requirements page </a> </li>
 
<li> <a href="https://2015.igem.org/Wiki_How-To">Wiki Requirements page</a></li>
 
</ul>
 
  
<div class="highlightBox">
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<div id="innerContent" class="container-fluid">
<h4> Styling your wiki </h4>
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<p>You may style this page as you like or you can simply leave the style as it is. You can easily keep the styling and edit the content of these default wiki pages with your project information and completely fulfill the requirement to document your project.</p>
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<p>While you may not win Best Wiki with this styling, your team is still eligible for all other awards. This default wiki meets the requirements, it improves navigability and ease of use for visitors, and you should not feel it is necessary to style beyond what has been provided.</p>
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</div>
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<h4> Editing your wiki </h4>
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<p style="text-indent: 5em">Santa Clara University is a Jesuit University located in the heart of Silicon Valley.  We are at the cutting edge of innovation while still maintaining our roots in traditional Catholic and Jesuit Values.  Part of being a Jesuit University means that we are taught not only to think of results and outcome, but the whole journey; where do we come from, how did we get here, who are we now, who are we becoming, and who we want to be.  This type of education is unique to Jesuit Schools that put the time and effort into the students as they are rather than whom they want you to be. In other words our education is about the whole self rather than focusing on one aspect of the self.  Santa Clara strives to instill upon its students Compassion, Conscience, Competence- or the three C’s. The Three C’s work together to create a well-rounded individual who can succeed at anything.</p>
<p>On this page you can document your project, introduce your team members, document your progress and share your iGEM experience with the rest of the world! </p>  
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<p style="text-indent: 5em">One thing that our education at Santa Clara has allowed us to do is think critically about problems and think of ways in which to tackle those problems.  What this meant for our project is that we were independently of our professors to design, execute, and understand our project.  This individualized approach meant that we had to have leadership within ourselves to take the initiative to understand our problem and work collaboratively to produce the best project we could.  The professors acted as a support network, only helping if we asked for help. We took a project from start to finish by ourselves and put to work everything that Santa Clara University has taught us.</p>  
<p> <a href="https://2015.igem.org/wiki/index.php?title=Team:Santa_Clara&action=edit"> Click here to edit this page! </a></p>
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<p style="text-indent: 5em">Our team worked together to create a project from start to finish with little support from seasoned faculty and professors.  We conducted our own background research, designed our own protocols, found our own resources, troubleshot our experiments, and critically analyzed everything on our own. None of this would have been possible without the whole rounded education that we received from Santa Clara University.</p>
<p>See tips on how to edit your wiki on the <a href="https://2015.igem.org/TemplatesforTeams_Code_Documentation">Template Documentation</a> page.</p>  
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        <h2>Achieving greater microbial aciduricity through the <i>Escherichia coli</i> cyclopropane fatty acid system.</h2>
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        <p>Cyclopropane fatty acid (CFA) synthesis is triggered as a response to acid stress in <i>Escherichia coli</i> in order to chemically modify its lipid bilayer and decrease its permeability to surrounding acids. The addition of the cyclopropane ring to fatty acid chains creates a sterically hindered path for acidic compounds attempting to cross the plasma membrane, thereby reducing the passive entrance of unwanted acids. We are aiming to standardize this acid defense system so that it may be implemented in other microorganisms to increase their survival under low pH conditions. By utilizing acid-resistant microbes, it is possible to decrease the running costs of bioreactors that are hindered by acid buildup from metabolic processes. Moreover, given that microbes often transition to stationary phase during acid stress, this CFA system may enable higher cell densities and biosynthetic yields in cell cultures because genetically modified microorganisms may more readily tolerate acidic conditions during growth. </p>
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    </div>
  
<h4>Templates </h4>
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<ul class="pager">
<p> This year we have created templates for teams to use freely. More information on how to use and edit the templates can be found on the
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  <li class="next">
<a href="https://2015.igem.org/TemplatesforTeams_Code_Documentation">Template Documentation </a> page.</p>
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    <a href="https://2015.igem.org/Team:Santa_Clara/Team">
 
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      Team <span class="glyphicon glyphicon-arrow-right"></span>
 
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    </a>
<h4>Tips</h4>
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  </li>
<p>This wiki will be your team’s first interaction with the rest of the world, so here are a few tips to help you get started: </p>
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<ul>
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<li>State your accomplishments! Tell people what you have achieved from the start. </li>
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<li>Be clear about what you are doing and how you plan to do this.</li>
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<li>You have a global audience! Consider the different backgrounds that your users come from.</li>
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<li>Make sure information is easy to find; nothing should be more than 3 clicks away.  </li>
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<li>Avoid using very small fonts and low contrast colors; information should be easy to read.  </li>
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<li>Start documenting your project as early as possible; don’t leave anything to the last minute before the Wiki Freeze. For a complete list of deadlines visit the <a href="https://2015.igem.org/Calendar_of_Events">iGEM 2015 calendar</a> </li>
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<li>Have lots of fun! </li>
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</ul>
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<h4>Inspiration</h4>
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<p> You can also view other team wikis for inspiration! Here are some examples:</p>
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<ul>
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<li> <a href="https://2014.igem.org/Team:SDU-Denmark/"> 2014 SDU Denmark </a> </li>
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<li> <a href="https://2014.igem.org/Team:Aalto-Helsinki">2014 Aalto-Helsinki</a> </li>
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<li> <a href="https://2014.igem.org/Team:LMU-Munich">2014 LMU-Munich</a> </li>
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<li> <a href="https://2014.igem.org/Team:Michigan"> 2014 Michigan</a></li>
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<li> <a href="https://2014.igem.org/Team:ITESM-Guadalajara">2014 ITESM-Guadalajara </a></li>
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<li> <a href="https://2014.igem.org/Team:SCU-China"> 2014 SCU-China </a></li>
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</ul>
 
</ul>
  
<h4> Uploading pictures and files </h4>
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<p> You can upload your pictures and files to the iGEM 2015 server. Remember to keep all your pictures and files within your team's namespace or at least include your team's name in the file name. <br />
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When you upload, set the "Destination Filename" to <code>Team:YourOfficialTeamName/NameOfFile.jpg</code>. (If you don't do this, someone else might upload a different file with the same "Destination Filename", and your file would be erased!)</p>
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<a href="https://2015.igem.org/Special:Upload">CLICK HERE TO UPLOAD FILES</a>
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Latest revision as of 03:28, 19 September 2015

Santa Clara Template for iGEM wiki site

SCU banner

Santa Clara University is a Jesuit University located in the heart of Silicon Valley. We are at the cutting edge of innovation while still maintaining our roots in traditional Catholic and Jesuit Values. Part of being a Jesuit University means that we are taught not only to think of results and outcome, but the whole journey; where do we come from, how did we get here, who are we now, who are we becoming, and who we want to be. This type of education is unique to Jesuit Schools that put the time and effort into the students as they are rather than whom they want you to be. In other words our education is about the whole self rather than focusing on one aspect of the self. Santa Clara strives to instill upon its students Compassion, Conscience, Competence- or the three C’s. The Three C’s work together to create a well-rounded individual who can succeed at anything.

One thing that our education at Santa Clara has allowed us to do is think critically about problems and think of ways in which to tackle those problems. What this meant for our project is that we were independently of our professors to design, execute, and understand our project. This individualized approach meant that we had to have leadership within ourselves to take the initiative to understand our problem and work collaboratively to produce the best project we could. The professors acted as a support network, only helping if we asked for help. We took a project from start to finish by ourselves and put to work everything that Santa Clara University has taught us.

Our team worked together to create a project from start to finish with little support from seasoned faculty and professors. We conducted our own background research, designed our own protocols, found our own resources, troubleshot our experiments, and critically analyzed everything on our own. None of this would have been possible without the whole rounded education that we received from Santa Clara University.

Achieving greater microbial aciduricity through the Escherichia coli cyclopropane fatty acid system.

Cyclopropane fatty acid (CFA) synthesis is triggered as a response to acid stress in Escherichia coli in order to chemically modify its lipid bilayer and decrease its permeability to surrounding acids. The addition of the cyclopropane ring to fatty acid chains creates a sterically hindered path for acidic compounds attempting to cross the plasma membrane, thereby reducing the passive entrance of unwanted acids. We are aiming to standardize this acid defense system so that it may be implemented in other microorganisms to increase their survival under low pH conditions. By utilizing acid-resistant microbes, it is possible to decrease the running costs of bioreactors that are hindered by acid buildup from metabolic processes. Moreover, given that microbes often transition to stationary phase during acid stress, this CFA system may enable higher cell densities and biosynthetic yields in cell cultures because genetically modified microorganisms may more readily tolerate acidic conditions during growth.