Difference between revisions of "Team:Aalto-Helsinki/LabBook"
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#sidenav > li > a > h4 { | #sidenav > li > a > h4 { | ||
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padding-bottom: 0px; | padding-bottom: 0px; | ||
} | } | ||
+ | #sidenav a:hover, | ||
+ | #sidenav a.active { | ||
+ | color: black !important; | ||
+ | } | ||
+ | |||
+ | /* Let's hide the navbar when the device is small! */ | ||
+ | @media screen and (max-width: 760px) { | ||
+ | #sidenav { display: none; } | ||
+ | } | ||
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/* Background pic */ | /* Background pic */ | ||
.plasmids { | .plasmids { | ||
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/* Fonts */ | /* Fonts */ | ||
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font-size:25px; | font-size:25px; | ||
} | } | ||
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</style> | </style> | ||
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<ul id="sidenav" class="nav nav-stacked"><!-- nav-pills if we want rounded corners --> | <ul id="sidenav" class="nav nav-stacked"><!-- nav-pills if we want rounded corners --> | ||
− | <li><a href="#week1"><h4>Week 1</h4></a></li> | + | <li><a href="#week1" data-scroll="week1"><h4>Week 1</h4></a></li> |
− | <li><a href="#week2"><h4>Week 2</h4></a></li> | + | <li><a href="#week2" data-scroll="week2"><h4>Week 2</h4></a></li> |
− | <li><a href="#week3"><h4>Week 3</h4></a></li> | + | <li><a href="#week3" data-scroll="week3"><h4>Week 3</h4></a></li> |
− | <li><a href="#week4"><h4>Week 4</h4></a></li> | + | <li><a href="#week4" data-scroll="week4"><h4>Week 4</h4></a></li> |
− | <li><a href="#week5"><h4>Week 5</h4></a></li> | + | <li><a href="#week5" data-scroll="week5"><h4>Week 5</h4></a></li> |
− | <li><a href="#week6"><h4>Week 6</h4></a></li> | + | <li><a href="#week6" data-scroll="week6"><h4>Week 6</h4></a></li> |
− | <li><a href="#week7"><h4>Week 7</h4></a></li> | + | <li><a href="#week7" data-scroll="week7"><h4>Week 7</h4></a></li> |
− | <li><a href="#week8"><h4>Week 8</h4></a></li> | + | <li><a href="#week8" data-scroll="week8"><h4>Week 8</h4></a></li> |
− | <li><a href="#week9"><h4>Week 9</h4></a></li> | + | <li><a href="#week9" data-scroll="week9"><h4>Week 9</h4></a></li> |
− | <li><a href="#week10"><h4>Week 10</h4></a></li> | + | <li><a href="#week10" data-scroll="week10"><h4>Week 10</h4></a></li> |
− | <li><a href="#week11"><h4>Week 11</h4></a></li> | + | <li><a href="#week11" data-scroll="week11"><h4>Week 11</h4></a></li> |
− | <li><a href="#week12"><h4>Week 12</h4></a></li> | + | <li><a href="#week12" data-scroll="week12"><h4>Week 12</h4></a></li> |
− | <li><a href="#week13"><h4>Week 13</h4></a></li> | + | <li><a href="#week13" data-scroll="week13"><h4>Week 13</h4></a></li> |
− | <li><a href="#week14"><h4>Week 14</h4></a></li> | + | <li><a href="#week14" data-scroll="week14"><h4>Week 14</h4></a></li> |
− | <li><a href="#week15"><h4>Week 15</h4></a></li> | + | <li><a href="#week15" data-scroll="week15"><h4>Week 15</h4></a></li> |
− | <li><a href="#week16"><h4>Week 16</h4></a></li> | + | <li><a href="#week16" data-scroll="week16"><h4>Week 16</h4></a></li> |
− | <li><a href="#week17"><h4>Week 17</h4></a></li> | + | <li><a href="#week17" data-scroll="week17"><h4>Week 17</h4></a></li> |
− | <li><a href="#week18"><h4>Week 18</h4></a></li> | + | <li><a href="#week18" data-scroll="week18"><h4>Week 18</h4></a></li> |
− | + | <li><a href="#"><h4 style="border-top:solid;">To the Top</h4></a></li> | |
+ | <li><a href="https://2015.igem.org/Team:Aalto-Helsinki/Lab" ><h4>To the Parent Page</h4></a></li> | ||
+ | </ul> | ||
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<div class="plasmids"> | <div class="plasmids"> | ||
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+ | <div class = "inner-container" > | ||
<h1>Lab Book</h1> | <h1>Lab Book</h1> | ||
+ | <p> Before reading our lab notes, familiarize yourelf with our <a href="https://static.igem.org/mediawiki/2015/7/7e/Aalto-Helsinki_plasmids-primers.xls">excel sheet</a>, which specifies the nomenclature we've used in out project. You can also find all of our primers on this excel.</p> | ||
</div><!-- end inner-container--> | </div><!-- end inner-container--> | ||
− | < | + | |
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+ | <!-- Here the code for small horizontal gap for our tables, copy and paste where you want it Anna! --><!-- | ||
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</tr> | </tr> | ||
− | + | --> | |
+ | |||
+ | |||
− | < | + | <!-- Week 1 below --> |
+ | <section id="week1" class="active" data-anchor="week1"> | ||
+ | <h2>Week 1</h2> | ||
<table > | <table > | ||
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<td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
<td class="white arrow" > | <td class="white arrow" > | ||
− | <p>o/n culture <br/> of E. coli <br/> TOP10</p> | + | <p>o/n culture <br/> of <i>E. coli</i> <br/> TOP10</p> |
</td> | </td> | ||
<td class="white arrow" > | <td class="white arrow" > | ||
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</td> | </td> | ||
<td class="blue arrow" > | <td class="blue arrow" > | ||
− | <p> | + | <p>Transformation <br/> efficiency kit</p> |
</td> | </td> | ||
</tr> | </tr> | ||
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<td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
<td class="white arrow" > | <td class="white arrow" > | ||
− | <p>o/n culture <br/> of E. coli <br/> BL21(DE3)</p> | + | <p>o/n culture <br/> of <i>E. coli</i> <br/> BL21(DE3)</p> |
</td> | </td> | ||
<td class="white arrow" > | <td class="white arrow" > | ||
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</td> | </td> | ||
<td class="red arrow" > | <td class="red arrow" > | ||
− | <p> | + | <p>Transformation <br/> efficiency kit</p> |
</td> | </td> | ||
<td class="red arrow" > | <td class="red arrow" > | ||
− | <p>Colonies | + | <p>Colonies have<br/> the wrong <br/>color</p> |
</td> | </td> | ||
</tr> | </tr> | ||
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</table> | </table> | ||
+ | </section> | ||
− | < | + | <div class="inner-container" style="margin: 5% 20% 5% 25%;"> |
+ | <p style="font-size:16px">Click <a href="https://static.igem.org/mediawiki/2015/2/2b/Aalto-Helsinki_week1.pdf" target="_blank">here</a> to read the full lab notes of week 1.</p></div> | ||
+ | |||
+ | <!-- Week 1 above --> | ||
+ | |||
+ | |||
+ | <!-- Week 2 below --> | ||
+ | <section id="week2" data-anchor="week2"> | ||
+ | <h2>Week 2</h2> | ||
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</tr> | </tr> | ||
<tr> | <tr> | ||
− | <td class="first rightline"><div class="heightdiv | + | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> |
− | + | ||
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<td class="white arrow" > | <td class="white arrow" > | ||
− | <p>Re-transform <br/> into TOP10</p> | + | <p>Re-transform <br/> AH005<br/> into TOP10</p> |
</td> | </td> | ||
<td class="white arrow" > | <td class="white arrow" > | ||
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</tr> | </tr> | ||
<tr> | <tr> | ||
− | <td class="first rightline"><div class="heightdiv | + | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> |
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Checking <br/><span style="font-size:20px">Competent Cells</span></h3></div></td> | ||
<td class="white arrow" > | <td class="white arrow" > | ||
<p style="font-size:12px">o/n culture <br/> of BL21(DE3) <br/> transformants</p> | <p style="font-size:12px">o/n culture <br/> of BL21(DE3) <br/> transformants</p> | ||
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<p> Smeared gels</p> | <p> Smeared gels</p> | ||
</td> | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
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</table> | </table> | ||
− | < | + | <div class="inner-container" style="margin: 5% 20% 5% 25%;"> |
+ | <p style="font-size:16px">Click <a href="https://static.igem.org/mediawiki/2015/5/51/Aalto-Helsinki_week2.pdf" target="_blank">here</a> to read the full lab notes of week 2.</p></div> | ||
+ | |||
+ | </section> | ||
+ | <!-- Week 2 above --> | ||
+ | |||
+ | |||
+ | <!-- Week 3 below --> | ||
+ | <section id="week3" data-anchor="week3"> | ||
+ | <h2>Week 3</h2> | ||
<table > | <table > | ||
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</tr> | </tr> | ||
<tr> | <tr> | ||
− | <td class="first rightline"><div class="heightdiv | + | <td class="first rightline"><div class="heightdiv"><h3>Preparations <br/><span style="font-size:20px">Propagating</span></h3></div></td> |
<td class="white arrow" > | <td class="white arrow" > | ||
<p style="font-size:13px;">Transform <br/> AH020 & AH021 <br/> into TOP10</p> | <p style="font-size:13px;">Transform <br/> AH020 & AH021 <br/> into TOP10</p> | ||
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<p>Plates in rt <br/> over weekend</p> | <p>Plates in rt <br/> over weekend</p> | ||
</td> | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
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</td> | </td> | ||
<td class="white arrow" > | <td class="white arrow" > | ||
− | <p>Ligate & <br/> | + | <p>Ligate & <br/> transform <br/> into TOP10</p> |
</td> | </td> | ||
<td class="red arrow" > | <td class="red arrow" > | ||
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</tr> | </tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
+ | |||
+ | <td class="white arrow" > | ||
+ | <p>Assembling <br/>AH015</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p> Ligate AH002+ <br/> AH005+AH008</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>Restrict & <br/> extract<br/> from gel</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>Transform into TOP10</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>o/n cultures</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>No colonies <br/>on the plate</p> | ||
+ | </td> | ||
+ | </tr> | ||
</table> | </table> | ||
− | < | + | <div class="inner-container" style="margin: 5% 20% 5% 25%;"> |
+ | <p style="font-size:16px">Click <a href="https://static.igem.org/mediawiki/2015/7/70/Aalto-Helsinki_week3.pdf" target="_blank">here</a> to read the full lab notes of week 3.</p></div> | ||
+ | |||
+ | </section> | ||
+ | <!-- Week 3 above --> | ||
+ | |||
+ | |||
+ | <!-- Week 4 below --> | ||
+ | <section id="week4" data-anchor="week4"> | ||
+ | |||
+ | <h2>Week 4</h2> | ||
<table > | <table > | ||
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</tr> | </tr> | ||
<tr> | <tr> | ||
− | <td class="first rightline"><div class="heightdiv | + | <td class="first rightline"><div class="heightdiv"><h3>Preparations <br/><span style="font-size:20px">Propagating</span></h3></div></td> |
<td class="white arrow" > | <td class="white arrow" > | ||
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</td> | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
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</table> | </table> | ||
+ | |||
+ | <div class="inner-container" style="margin: 5% 20% 5% 25%;"> | ||
+ | <p style="font-size:16px">Click <a href="https://static.igem.org/mediawiki/2015/1/1f/Aalto-Helsinki_week4.pdf" target="_blank">here</a> to read the full lab notes of week 4.</p></div> | ||
+ | |||
+ | </section> | ||
+ | <!-- Week 4 above --> | ||
− | < | + | <!-- Week 5 below --> |
+ | <section id="week5" data-anchor="week5"> | ||
+ | <h2>Week 5</h2> | ||
<table> | <table> | ||
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<td class="first rightline"><div class="heightdiv"><h3>Testing RBS's <br/> <span style="font-size:20px">Assembly</span></h3></div></td> | <td class="first rightline"><div class="heightdiv"><h3>Testing RBS's <br/> <span style="font-size:20px">Assembly</span></h3></div></td> | ||
<td class="white arrow" > | <td class="white arrow" > | ||
− | <p style="font-size:12px">Screening | + | <p style="font-size:12px">Screening AH011 <br/>& AH013-AH015 <br/>by gel <br/> electrophoresis</p> |
</td> | </td> | ||
<td class="blue arrow" > | <td class="blue arrow" > | ||
− | <p> | + | <p>AH011, AH013 <br/> & AH015 OK</p> |
</td> | </td> | ||
<td class="white arrow" > | <td class="white arrow" > | ||
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<p>Transform into TOP10 & BL21(DE3)</p> | <p>Transform into TOP10 & BL21(DE3)</p> | ||
</td> | </td> | ||
− | <td class=" | + | <td class="red arrow" > |
<p>T7 promoter <br/>doesn't work <br/>in TOP10...</p> | <p>T7 promoter <br/>doesn't work <br/>in TOP10...</p> | ||
</td> | </td> | ||
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</tr> | </tr> | ||
<tr> | <tr> | ||
− | <td class="first rightline"><div class="heightdiv | + | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> |
<td class="white arrow" > | <td class="white arrow" > | ||
<p>Re-assembling <br/>AH016 &<br/> AH018</p> | <p>Re-assembling <br/>AH016 &<br/> AH018</p> | ||
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<p>Colonies are <br/> not blue</p> | <p>Colonies are <br/> not blue</p> | ||
</td> | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
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</td> | </td> | ||
</tr> | </tr> | ||
+ | </table> | ||
+ | |||
+ | <div class="inner-container" style="margin: 5% 20% 5% 25%;"> | ||
+ | <p style="font-size:16px">Click <a href="https://static.igem.org/mediawiki/2015/f/f8/Aalto-Helsinki_week5.pdf" target="_blank">here</a> to read the full lab notes of week 5.</p></div> | ||
+ | </section> | ||
+ | <!-- Week 5 above --> | ||
+ | <!-- Week 6 above --> | ||
+ | <section id="week6" data-anchor="week6"> | ||
− | + | <h2>Week 6</h2> | |
− | + | ||
− | <h2 | + | |
<table > | <table > | ||
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<tr> | <tr> | ||
− | <td class="first rightline"><div class="heightdiv | + | <td class="first rightline"><div class="heightdiv"><h3>Preparations <br/> <span style="font-size:20px">Linearized Backbones</span></h3></div></td> |
<td class="white arrow" > | <td class="white arrow" > | ||
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<p>Restrict & <br/>extract <br/>from gel</p> | <p>Restrict & <br/>extract <br/>from gel</p> | ||
</td> | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
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</table> | </table> | ||
+ | <div class="inner-container" style="margin: 5% 20% 5% 25%;"> | ||
+ | <p style="font-size:16px">Click <a href="https://static.igem.org/mediawiki/2015/9/9c/Aalto-Helsinki_week6.pdf" target="_blank">here</a> to read the full lab notes of week 6. <br> Blue chromoprotein measurement data from 23.6. can be found <a href="https://static.igem.org/mediawiki/2015/6/63/Aalto-Helsinki_blue_chromoprotein_measurement_data_230615.xls" target="_blank">here</a>.</p></div> | ||
− | < | + | </section> |
+ | <!-- Week 6 above --> | ||
+ | |||
+ | |||
+ | <!-- Week 7 below --> | ||
+ | <section id="week7" data-anchor="week7"> | ||
+ | |||
+ | <h2>Week 7</h2> | ||
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</tr> | </tr> | ||
<tr> | <tr> | ||
− | <td class="first rightline"><div class="heightdiv | + | <td class="first rightline"><div class="heightdiv"><h3>Preparations <br/> <span style="font-size:20px">Linearized Backbones</span></h3></div></td> |
<td class="white arrow" > | <td class="white arrow" > | ||
<p style="font-size:12px">Transform <br/>AH007-AH009 <br/> into TOP10</p> | <p style="font-size:12px">Transform <br/>AH007-AH009 <br/> into TOP10</p> | ||
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<p>Use iGEM's <br/>linearized <br/>backbones</p> | <p>Use iGEM's <br/>linearized <br/>backbones</p> | ||
</td> | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
<td class="first rightline"><div class="heightdiv"><h3>Testing RBS's</h3></div></td> | <td class="first rightline"><div class="heightdiv"><h3>Testing RBS's</h3></div></td> | ||
− | <td class=" | + | <td class="white arrow" > |
− | <p style="color: | + | <p style="color:black;font-size:12px">o/n cultures of <br/> AH016&AH018 <br/> in BL21</p> |
</td> | </td> | ||
− | <td class=" | + | <td class="white arrow" > |
− | <p style="color: | + | <p style="color:black">IPTG <br/>induction</p> |
</td> | </td> | ||
<td class="red arrow" > | <td class="red arrow" > | ||
− | <p style="color: | + | <p style="color:white">No Blue <br/> chromoprotein</p> |
</td> | </td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
− | <td class="first rightline"><div class="heightdiv | + | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> |
<td class="white arrow" > | <td class="white arrow" > | ||
<p style="font-size:12px">Refresh AH016 &<br/>AH018 on <br/> IPTG plate</p> | <p style="font-size:12px">Refresh AH016 &<br/>AH018 on <br/> IPTG plate</p> | ||
Line 823: | Line 817: | ||
<p >No blue <br/> chromoprotein</p> | <p >No blue <br/> chromoprotein</p> | ||
</td> | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
Line 828: | Line 825: | ||
<td class="white arrow" > | <td class="white arrow" > | ||
− | <p>PCR | + | <p>PCR AH020 <br/>with<br/> P012&P013</p> |
</td> | </td> | ||
<td class="blue arrow" > | <td class="blue arrow" > | ||
Line 866: | Line 863: | ||
− | < | + | <div class="inner-container" style="margin: 5% 20% 5% 25%;"> |
+ | <p style="font-size:16px">Click <a href="https://static.igem.org/mediawiki/2015/6/65/Aalto-Helsinki_week7.pdf" target="_blank">here</a> to read the full lab notes of week 7. <br> Blue chromoprotein measurement data from 30.6. can be found <a href="https://static.igem.org/mediawiki/2015/a/a5/Aalto-Helsinki_blue_chromoprotein_measurement_data_300615.xls" target="_blank">here</a>.</p></div> | ||
+ | |||
+ | </section> | ||
+ | <!-- Week 7 above --> | ||
+ | |||
+ | |||
+ | |||
+ | <!-- Week 8 below --> | ||
+ | <section id="week8" data-anchor="week8"> | ||
+ | |||
+ | <h2>Week 8</h2> | ||
<table > | <table > | ||
Line 880: | Line 888: | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
− | <td class="first rightline"><div class="heightdiv | + | <td class="first rightline"><div class="heightdiv"><h3>Preparations <span style="font-size:20px">Competent Cells</span></h3></div></td> |
<td class="white arrow" > | <td class="white arrow" > | ||
<p style="font-size:12px">Preparing <br/> PK BL21(DE3)<br/> competent cells</p> | <p style="font-size:12px">Preparing <br/> PK BL21(DE3)<br/> competent cells</p> | ||
</td> | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>(Cells <br/>called PK's <br/>BL21(DE3))</p> | ||
+ | </td> | ||
<td class="blue arrow" > | <td class="blue arrow" > | ||
<p>Cells stored <br/>in -80°C</p> | <p>Cells stored <br/>in -80°C</p> | ||
− | </td> | + | </td> |
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
Line 907: | Line 921: | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
− | <td class="first rightline"><div class="heightdiv | + | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> |
<td class="white arrow" > | <td class="white arrow" > | ||
<p>AH029 into <br/> TOP10</p> | <p>AH029 into <br/> TOP10</p> | ||
Line 914: | Line 928: | ||
<p>Transformants <br/>stored in <br/>+4°C</p> | <p>Transformants <br/>stored in <br/>+4°C</p> | ||
</td> | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
− | <td class="first rightline"><div class="heightdiv | + | <td class="first rightline"><div class="heightdiv"><h3>Testing RBS's</h3></div></td> |
</td> | </td> | ||
Line 929: | Line 946: | ||
</td> | </td> | ||
</tr> | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
<tr> | <tr> | ||
<td class="first rightline"><div class="heightdiv"><h3>Violacein Plasmid <br/><span style="font-size:20px"> Construction</span></h3></div></td> | <td class="first rightline"><div class="heightdiv"><h3>Violacein Plasmid <br/><span style="font-size:20px"> Construction</span></h3></div></td> | ||
Line 942: | Line 962: | ||
</table> | </table> | ||
+ | <div class="inner-container" style="margin: 5% 20% 5% 25%;"> | ||
+ | <p style="font-size:16px">Click <a href="https://static.igem.org/mediawiki/2015/4/43/Aalto-Helsinki_week8.pdf" target="_blank">here</a> to read the full lab notes of week 8.</p></div> | ||
+ | |||
+ | </section> | ||
+ | <!-- Week 8 above --> | ||
+ | |||
+ | |||
+ | |||
+ | <!-- Week 9 below --> | ||
+ | <section id="week9" data-anchor="week9"> | ||
− | <h2 | + | <h2>Week 9</h2> |
<table > | <table > | ||
Line 957: | Line 987: | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
− | <td class="first rightline"><div class="heightdiv | + | <td class="first rightline"><div class="heightdiv"><h3>Preparations <br/> <span style="font-size:20px">Propagations</span></h3></div></td> |
<td class="white arrow" > | <td class="white arrow" > | ||
Line 966: | Line 996: | ||
</td> | </td> | ||
</tr> | </tr> | ||
− | + | <tr> | |
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
<tr> | <tr> | ||
<td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
− | + | <td></td> | |
− | <td> | + | |
− | + | ||
<td class="blueup arrow" > | <td class="blueup arrow" > | ||
<p>CAR2 OK</p> | <p>CAR2 OK</p> | ||
Line 977: | Line 1,007: | ||
<td class="blue arrow" > | <td class="blue arrow" > | ||
<p>PCR <br/>purification</p> | <p>PCR <br/>purification</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>Low yield</p> | ||
</td> | </td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
− | <td class="first rightline"><div class="heightdiv"><h3>Propane | + | <td class="first rightline"><div class="heightdiv"><h3>Propane Plasmid 1 <span style="font-size:20px">Construction </span></h3></div></td> |
− | + | ||
+ | <td class="white arrow" > | ||
+ | <p>Construct <br/>from 3 parts:<br/> CAR1-3</p> | ||
+ | </td> | ||
<td class="white arrow" > | <td class="white arrow" > | ||
− | <p>PCR for <br/> CAR1-3 | + | <p>PCR for <br/> CAR1-3</p> |
</td> | </td> | ||
<td class="red arrow" > | <td class="red arrow" > | ||
− | <p style="font-size:12px">CAR1 | + | <p style="font-size:12px">CAR1 & 3 <br/> unspecific bands</p> |
</td> | </td> | ||
<td class="red arrow" > | <td class="red arrow" > | ||
− | <p>Gradient PCR <br/>for CAR3 | + | <p>Gradient PCR <br/>for CAR3</p> |
+ | </td> | ||
+ | <td class="blue arrow"> | ||
+ | <p>PCR with <br/> DMSO <br/>for CAR3</p> | ||
+ | </td> | ||
+ | <td class="white arrow"> | ||
+ | <p>Store <br/>in -20°C</p> | ||
</td> | </td> | ||
</tr> | </tr> | ||
− | |||
<tr> | <tr> | ||
− | <td class="first rightline"><div class="heightdiv | + | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> |
− | <td></td> | + | <td></td> <td></td> |
− | <td class="whitedown arrow" > | + | <td class="whitedown arrow" > |
− | <p style="font-size:12px">PCR with DMSO <br/>for CAR1 | + | <p style="font-size:12px">PCR with DMSO <br/>for CAR1</p> |
</td> | </td> | ||
<td class="red arrow" > | <td class="red arrow" > | ||
− | <p | + | <p>No product</p> |
</td> | </td> | ||
</tr> | </tr> | ||
− | |||
<tr> | <tr> | ||
− | <td class="first rightline"><div class="heightdiv | + | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> |
+ | </tr> | ||
+ | <tr> | ||
+ | <td></td> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
+ | <td class="blueup arrow" > | ||
+ | <p>PCR with <br/>DMSO for <br/>AtoB1</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Store <br/> in -20°C</p> | ||
+ | </td> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Propane Plasmid 2 <span style="font-size:20px">Construction</span></h3></div></td> | ||
+ | <td class="white arrow"> | ||
+ | <p>Construct from <br/>4 parts: <br/>AtoB1-4</p> | ||
+ | </td> | ||
+ | <td class="red arrow"> | ||
+ | <p>PCR for <br/>AtoB 1-4</p> | ||
+ | </td> | ||
+ | <td class="white arrow"> | ||
+ | <p>Gradient PCR <br/> for AtoB2</p> | ||
+ | </td> | ||
+ | <td class="blue arrow"> | ||
+ | <p>PCR with <br/>DMSO for <br/>AtoB2</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Store <br/> in -20°C</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
+ | <td></td> | ||
+ | <td class="bluedown arrow"> | ||
+ | <p>Gradient PCR <br/> for AtoB3</p> | ||
+ | </td> | ||
+ | <td class="white arrow"> | ||
+ | <p>Extract & <br/> purify from gel</p> | ||
+ | </td> | ||
+ | <td class="white arrow"> | ||
+ | <p>Store <br/> in -20°C</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
+ | <td class="bluedown arrow" > | ||
+ | <p>Extract & <br/> purify AtoB4 <br/>from gel</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Store <br/> in -20°C</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>GFP Brick <span style="font-size:20px">Construction</span></h3></div></td> | ||
<td class="white arrow" > | <td class="white arrow" > | ||
Line 1,016: | Line 1,111: | ||
</td> | </td> | ||
</tr> | </tr> | ||
− | + | ||
− | + | </table> | |
− | < | + | <div class="inner-container" style="margin: 5% 20% 5% 25%;"> |
− | + | <p style="font-size:16px">Click <a href="https://static.igem.org/mediawiki/2015/2/28/Aalto-Helsinki_week9.pdf" target="_blank">here</a> to read the full lab notes of week 9.</p></div> | |
+ | |||
+ | </section> | ||
+ | <!-- Week 9 above --> | ||
+ | |||
+ | |||
+ | |||
+ | <!-- Week 10 below --> | ||
+ | <section id="week10" data-anchor="week10"> | ||
+ | |||
+ | <h2>Week 10</h2> | ||
+ | <table> | ||
+ | <tr> | ||
+ | <td class="bottomline rightline first"><h3 style="padding-top:0;margin-top:0;margin-bottom:0;padding-bottom:0;">Worked With</h3></td> | ||
+ | <td class="bottomline"><h3>WorkFlow</h3></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"><h3>July 20th -<br/> July 24th</h3></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Preparations <span style="font-size:20px">Linearized Backbones</span></h3></div></td> | ||
</td> | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Transform AH043 into TOP10</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>o/n culture</p> | ||
+ | </td> | ||
+ | <td class=blue arrow" > | ||
+ | <p>MiniPrep</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>Restrict</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Propane Plasmid 1 <span style="font-size:20px">Construction</span></h3></div></td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Gradient PCR <br/> for CAR1</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Extract & <br/> purify from gel</p> | ||
+ | </td> | ||
<td class="red arrow" > | <td class="red arrow" > | ||
− | <p> | + | <p>Low yield</p> |
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p style="font-size:12px">TOPO Blunt End <br/>cloning and <br/>transform into TOP10t</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>Screen with <br/> colony PCR</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Screen more <br/> colonies</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
+ | <td class="white arrow" > | ||
+ | <p>CAR2 PCR <br/>ran on gel</p> | ||
</td> | </td> | ||
<td class="white arrow" > | <td class="white arrow" > | ||
− | <p> | + | <p>Gradient PCR</p> |
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Extract & <br/> purify <br/> from gel</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p style="font-size:12px">Illegal restriction <br/>site found <br/>in the part</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
+ | |||
+ | <td class="white arrow" > | ||
+ | <p>CAR3 PCR <br/>with DMSO <br/>run on gel</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>Extract <br/> purify from gel <br/><span style="font-size:12px">unclean product</span></p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p style="font-size:12px">TOPO Blunt End <br/>cloning and <br/>transform into TOP10t</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>Screen with <br/> colony PCR</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>Extract & <br/>purify <br/>from gel</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Propane Plasmid 2 <span style="font-size:20px">Construction</span></h3></div></td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Run AtoB1 <br/>PCR with <br/>DMSO on gel</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Extract & <br/> purify from gel</p> | ||
</td> | </td> | ||
<td class="red arrow" > | <td class="red arrow" > | ||
− | <p>Low | + | <p>Low yield</p> |
</td> | </td> | ||
</tr> | </tr> | ||
+ | |||
<tr> | <tr> | ||
<td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
− | |||
− | |||
− | |||
</td> | </td> | ||
− | <td class=" | + | <td class="white arrow" > |
− | <p> | + | <p>Run AtoB2 <br/>PCR with <br/>DMSO on gel</p> |
</td> | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Extract & <br/>purify from gel</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>Low yield</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
</tr> | </tr> | ||
+ | |||
</table> | </table> | ||
− | |||
+ | <div class="inner-container" style="margin: 5% 20% 5% 25%;"> | ||
+ | <p style="font-size:16px">Click <a href="https://static.igem.org/mediawiki/2015/2/2b/Aalto-Helsinki_week10.pdf" target="_blank">here</a> to read the full lab notes of week 10.</p></div> | ||
+ | |||
+ | </section> | ||
+ | <!-- Week 10 above --> | ||
+ | |||
+ | |||
+ | |||
+ | <!-- Week 11 below --> | ||
+ | <section id="week11" data-anchor="week11"> | ||
− | <h2 | + | <h2>Week 11</h2> |
Line 1,087: | Line 1,296: | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
− | <td class="first rightline"><div class="heightdiv | + | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> |
</td> | </td> | ||
Line 1,112: | Line 1,321: | ||
</td> | </td> | ||
</tr> | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
<tr> | <tr> | ||
<td class="first rightline"><div class="heightdiv"><h3>Propane Plasmid 1 <span style="font-size:20px">Construction</span></h3></div></td> | <td class="first rightline"><div class="heightdiv"><h3>Propane Plasmid 1 <span style="font-size:20px">Construction</span></h3></div></td> | ||
Line 1,146: | Line 1,358: | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
− | <td class="first rightline"><div class="heightdiv | + | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> |
<td> | <td> | ||
</td> | </td> | ||
Line 1,159: | Line 1,371: | ||
</td> | </td> | ||
</tr> | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
+ | <td class="blue arrow" > | ||
+ | <p style="font-size:12px">KAPA <br/>gradient PCR <br/>for CAR3</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Gel purification</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | |||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
<tr> | <tr> | ||
− | <td class="first rightline"><div class="heightdiv | + | <td class="first rightline"><div class="heightdiv"><h3>Propane Plasmid 2 <span style="font-size:20px">Construction</span></h3></div></td> |
</td> | </td> | ||
Line 1,174: | Line 1,399: | ||
</td> | </td> | ||
</tr> | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
+ | |||
+ | <td class="blue arrow" > | ||
+ | <p style="font-size:12px">KAPA gradient <br/>PCR for AtoB3&4</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>PCR purification <br/>for AtoB3</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
+ | <td> | ||
+ | </td> | ||
+ | <td class="whitedown arrow" > | ||
+ | <p>Gel <br/> purification <br/> for AtoB4</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
<tr> | <tr> | ||
<td class="first rightline"><div class="heightdiv"><h3>Cellulose Plasmid <span style="font-size:20px">Construction</span></h3></div></td> | <td class="first rightline"><div class="heightdiv"><h3>Cellulose Plasmid <span style="font-size:20px">Construction</span></h3></div></td> | ||
Line 1,198: | Line 1,444: | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
− | <td class="first rightline"><div class="heightdiv | + | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> |
<td> | <td> | ||
</td> | </td> | ||
Line 1,207: | Line 1,453: | ||
</td> | </td> | ||
</tr> | </tr> | ||
− | + | <tr> | |
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
<tr> | <tr> | ||
<td class="first rightline"><div class="heightdiv"><h3>Violacein Plasmid <span style="font-size:20px">Construction</span></h3></div></td> | <td class="first rightline"><div class="heightdiv"><h3>Violacein Plasmid <span style="font-size:20px">Construction</span></h3></div></td> | ||
Line 1,218: | Line 1,466: | ||
</td> | </td> | ||
</tr> | </tr> | ||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
</table> | </table> | ||
+ | <div class="inner-container" style="margin: 5% 20% 5% 25%;"> | ||
+ | <p style="font-size:16px">Click <a href="https://static.igem.org/mediawiki/2015/1/15/Aalto-Helsinki_week11.pdf" target="_blank">here</a> to read the full lab notes of week 11.</p></div> | ||
+ | |||
+ | </section> | ||
+ | <!-- Week 11 above --> | ||
+ | |||
+ | |||
+ | |||
+ | <!-- Week 12 below --> | ||
+ | <section id="week12" data-anchor="week12"> | ||
− | <h2 | + | <h2>Week 12</h2> |
<table > | <table > | ||
Line 1,289: | Line 1,530: | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
− | <td class="first rightline"><div class="heightdiv | + | <td class="first rightline"><div class="heightdiv"><h3><span style="font-size:20px">Fixing Commercial Backbones</span></h3></div></td> |
<td class="white arrow" > | <td class="white arrow" > | ||
Line 1,298: | Line 1,539: | ||
</td> | </td> | ||
</tr> | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
<tr> | <tr> | ||
<td class="first rightline"><div class="heightdiv"><h3>Propane Plasmid 1 <span style="font-size:20px">Construction</span></h3></div></td> | <td class="first rightline"><div class="heightdiv"><h3>Propane Plasmid 1 <span style="font-size:20px">Construction</span></h3></div></td> | ||
Line 1,328: | Line 1,572: | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
− | <td class="first rightline"><div class="heightdiv | + | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> |
<td class="white arrow" > | <td class="white arrow" > | ||
<p>NEBuilder <br/> protocol</p> | <p>NEBuilder <br/> protocol</p> | ||
Line 1,346: | Line 1,590: | ||
<p>Send for <br/>sequencing</p> | <p>Send for <br/>sequencing</p> | ||
</td> | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
− | <td class="first rightline"><div class="heightdiv | + | <td class="first rightline"><div class="heightdiv"><h3>Violacein Plasmid <span style="font-size:20px">Construction</span></h3></div></td> |
</td> | </td> | ||
Line 1,358: | Line 1,605: | ||
</td> | </td> | ||
</tr> | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
<tr> | <tr> | ||
− | <td class="first rightline"><div class="heightdiv | + | <td class="first rightline"><div class="heightdiv"><h3>Cellulose Plasmid <span style="font-size:20px">Construction</span></h3></div></td> |
<td class="blue arrow" > | <td class="blue arrow" > | ||
− | <p>PCR purification <br/> for | + | <p>PCR purification <br/> for BglX <br/> 2nd PCR</p> |
</td> | </td> | ||
<td class="white arrow" > | <td class="white arrow" > | ||
Line 1,368: | Line 1,618: | ||
</td> | </td> | ||
</tr> | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
<tr> | <tr> | ||
<td class="first rightline"><div class="heightdiv"><h3>Amph protein</h3></div></td> | <td class="first rightline"><div class="heightdiv"><h3>Amph protein</h3></div></td> | ||
Line 1,383: | Line 1,636: | ||
</td> | </td> | ||
</tr> | </tr> | ||
+ | |||
<tr> | <tr> | ||
− | <td class="first rightline"><div class="heightdiv | + | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> |
<td> | <td> | ||
</td> | </td> | ||
Line 1,391: | Line 1,645: | ||
</td> | </td> | ||
</tr> | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
<tr> | <tr> | ||
− | <td class="first rightline"><div class="heightdiv | + | <td class="first rightline"><div class="heightdiv"><h3>GFP protein</h3></div></td> |
<td class="blue arrow" > | <td class="blue arrow" > | ||
Line 1,401: | Line 1,658: | ||
</td> | </td> | ||
</tr> | </tr> | ||
− | + | <tr> | |
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
<tr> | <tr> | ||
<td class="first rightline"><div class="heightdiv"><h3>Propane <span style="font-size:20px">Measurement</span></h3></div></td> | <td class="first rightline"><div class="heightdiv"><h3>Propane <span style="font-size:20px">Measurement</span></h3></div></td> | ||
Line 1,410: | Line 1,669: | ||
<td class="white arrow" > | <td class="white arrow" > | ||
<p>Propane measurement</p> | <p>Propane measurement</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>No propane <br/>detected</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | </table> | ||
+ | |||
+ | <div class="inner-container" style="margin: 5% 20% 5% 25%;"> | ||
+ | <p style="font-size:16px">Click <a href="https://static.igem.org/mediawiki/2015/a/a9/Aalto-Helsinki_week12.pdf" target="_blank">here</a> to read the full lab notes of week 12.</p></div> | ||
+ | |||
+ | </section> | ||
+ | <!-- Week 12 above --> | ||
+ | |||
+ | |||
+ | <!-- Week 13 below --> | ||
+ | <section id="week13" data-anchor="week13"> | ||
+ | |||
+ | <h2>Week 13</h2> | ||
+ | |||
+ | <table > | ||
+ | <tr> | ||
+ | <td class="bottomline rightline first"><h3 style="padding-top:0;margin-top:0;margin-bottom:0;padding-bottom:0;">Worked With</h3></td> | ||
+ | <td class="bottomline"><h3>WorkFlow</h3></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"><h3>August 10th -<br/> August 14th</h3></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Amphiphilic Protein <span style="font-size:20px">Construction</span></h3></div></td> | ||
+ | <td class="white arrow" > | ||
+ | <p>PCR amph <br/> with P044&P045</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>No product</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Gradient <br/>PCR</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>No product</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Continue with <br/>last week's <br/>product</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | |||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Amph with Linker <span style="font-size:20px">Validation</span></h3></div></td> | ||
+ | <td></td><td></td> | ||
+ | <td class="blueup arrow" > | ||
+ | <p>Colony PCR <br/>amph with<br/> P045&P046</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>O/n culture</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>MiniPrep</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>Restrict & <br/>check <br/>on gel</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
+ | <td class="blue arrow" > | ||
+ | <p style="font-size:12px">Extract & purify <br/>Amph P046&P051 <br/>and P045&P046 <br/>from gel</p> | ||
+ | <td class="white arrow" > | ||
+ | <p>Assemble both <br/>into pSB1C3 <br/>backbone</p> | ||
+ | <td class="blue arrow" > | ||
+ | <p>Transform <br/>into TOP10</p> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Amph no term <span style="font-size:20px">Validation</span></h3></div></td> | ||
+ | <td></td><td></td> | ||
+ | <td class="bluedown arrow" > | ||
+ | <p>Colony PCR <br/>amph with<br/> P046&P051</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>O/n culture</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>MiniPrep</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>Restrict & <br/>check <br/>on gel</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Preparations <span style="font-size:20px">Backbones</span></h3></div></td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Restrict AH043</p> | ||
</td> | </td> | ||
<td class="white arrow" > | <td class="white arrow" > | ||
− | <p> | + | <p>Stored <br/> in -20°C</p> |
</td> | </td> | ||
</tr> | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>GFP & Amph Bricks <br/><span style="font-size:20px">Assembly</span></h3></div></td> | ||
+ | <td class="white arrow" > | ||
+ | <p style="font-size:12px">Restrict & <br/>ligate GFP and<br/> Amph into AH009</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>Transform <br/>into TOP10</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>Screen with <br/>colony PCR</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>o/n culture</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>MiniPrep</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>Check on <br/>gel</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Send for <br/>sequencing</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Propane Plasmid 2 <span style="font-size:20px">Assembly</span></h3></div></td> | ||
+ | |||
+ | <td class="white arrow" > | ||
+ | <p>NEBuilder <br/>protocol</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>Transform <br/>into TOP10</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>Screen with <br/>colony PCR</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Re-do NEBuilder <br/> and transfrom <br/> to TOP10</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>Screen with <br/> colony PCR</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>o/n culture of <br/>one potential <br/>colony</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>o/n culture <br/>turned red</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
+ | <td class="white arrow" > | ||
+ | <p>ELIC protocol</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Transform <br/>into TOP10</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>No colonies</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Cellulose Plasmid <span style="font-size:20px">Assembly</span></h3></div></td> | ||
+ | <td class="white arrow"> | ||
+ | <p style="font-size:12px">NEBuilder protocol <br/> and transform <br/>into TOP10</p> | ||
+ | </td> | ||
+ | <td class="white arrow"> | ||
+ | <p>Screen with <br/>colony PCR</p> | ||
+ | </td> | ||
+ | <td class="red arrow"> | ||
+ | <p>Mistake in <br/> protocol</p> | ||
+ | </td> | ||
+ | <td class="white arrow"> | ||
+ | <p>Re-do NEBuilder <br/> and transform <br/> into TOP10</p> | ||
+ | </td> | ||
+ | <td class="red arrow"> | ||
+ | <p>Screen with <br/> colony PCR</p> | ||
+ | </td> | ||
+ | <td class="white arrow"> | ||
+ | <p>o/n cultures and <br/>MiniPrep of <br/>white colonies</p> | ||
+ | </td> | ||
+ | <td class="red arrow"> | ||
+ | <p>Restrict & <br/>check on gel</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
+ | <td class="white arrow"> | ||
+ | <p>ELIC <br/>protocol</p> | ||
+ | </td> | ||
+ | <td class="blue arrow"> | ||
+ | <p>Transform <br/>into TOP10</p> | ||
+ | <td class="white arrow" > | ||
+ | <p>Screen with <br/>colony PCR</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>Mistake in <br/>protocol</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>Re-do ELIC <br/> and transform <br/> into TOP10</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>Screen with <br/> colony PCR</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>GFP Brick <span style="font-size:20px">Validation</span></h3></div></td> | ||
+ | |||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Restrict AH013, <br/>AH015 & AH007</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>Ligate AH007, <br/>AH013 & GFP</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Transform <br/>into TOP10</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>RT over <br/> weekend</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
+ | |||
+ | </td> | ||
+ | <td> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>Ligate AH007, <br/>AH015 & GFP</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Transform <br/>into TOP10</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>RT over <br/> weekend</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | |||
</table> | </table> | ||
− | < | + | <div class="inner-container" style="margin: 5% 20% 5% 25%;"> |
+ | <p style="font-size:16px">Click <a href="https://static.igem.org/mediawiki/2015/0/03/Aalto-Helsinki_week13.pdf" target="_blank">here</a> to read the full lab notes of week 13.</p></div> | ||
+ | |||
+ | </section> | ||
+ | <!-- Week 13 above --> | ||
+ | |||
+ | |||
+ | |||
+ | <!-- Week 14 below --> | ||
+ | <section id="week14" data-anchor="week14"> | ||
+ | |||
<h2 id="week14">Week 14</h2> | <h2 id="week14">Week 14</h2> | ||
+ | |||
+ | <table > | ||
+ | <tr> | ||
+ | <td class="bottomline rightline first"><h3 style="padding-top:0;margin-top:0;margin-bottom:0;padding-bottom:0;">Worked With</h3></td> | ||
+ | <td class="bottomline"><h3>WorkFlow</h3></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"><h3>August 17th -<br/> August 21st</h3></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Preparations <br/> <span style="font-size:20px">Propagations</span></h3></div></td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Transform <br/>AH045 into <br/>TOP10</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>o/n culture</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>MiniPrep</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Propane Plasmid 1 <span style="font-size:20px">Assembly</span></h3></div></td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Restrict & <br/> ligate CAR <br/>into AH009</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Transform into TOP10</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>o/n culture</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>MiniPrep</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>Restrict & <br/> check on gel</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
+ | <td class="red arrow" > | ||
+ | <p style:"font-size:12px">Sequencing of <br/>Propane Plasmid 1 <br/>unsuccessful</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p style="font-size:12px">Send construct in AH009 for sequencing</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | |||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3><span style="font-size:20px">Validation</span></h3></div></td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Transform into <br/>Pauli's <br/> BL21(DE3)</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Amphiphilic Propane 1</h3></div></td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Gradient PCR <br/>for CAR amph <br/> parts</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>CAR amph3 <br/>purified <br/> from gel</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"></div></td> | ||
+ | <td class="whitedown arrow" > | ||
+ | <p>PCR purification <br/> for CAR <br/> amph4</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | |||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Propane Plasmid 2<br/> <span style="font-size:20px">Construction</span></h3></div></td> | ||
+ | |||
+ | <td class="white arrow" > | ||
+ | <p>OE-PCR</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>No product</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | |||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
+ | |||
+ | <td class="white arrow" > | ||
+ | <p>Check old <br/>NEBuilders<br/> on gel</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>Re-transform <br/> into TOP10</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>o/n cultures of <br/>colorless <br/>colonies</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>MiniPrep</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>Restrict & <br/> check <br/> on gel</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Cellulose Plasmid <span style="font-size:20px"> Construction </span></h3></div></td> | ||
+ | |||
+ | <td class="blue arrow" > | ||
+ | <p>OE-PCR</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Extract & <br/> purify <br/> from gel</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>Concentration too low</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | |||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
+ | <td> | ||
+ | </td> | ||
+ | <td class="whitedown arrow" > | ||
+ | <p>PCR <br/>purification</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>NEBuilder with AH009</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Transform into <br/>NEB5alpha <br/> over weekend</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
+ | |||
+ | <td class="white arrow" > | ||
+ | <p>Check old <br/>NEBuilder <br/>on gel</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>Re-transform into TOP10</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>o/n of colorless <br/> colonies</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>MiniPrep</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>Restrict & <br/> check <br/>on gel</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>GFP <span <style="font-size:20px"> Assembly</span></h3></div></td> | ||
+ | |||
+ | <td class="white arrow"> | ||
+ | <p style="font-size:12px">2A assembly for <br/>AH013/AH015,<br/>GFP & pSB1C3</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Transform <br/>into TOP10</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>Colonies can’t <br/>be separated</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>3A assembly <br/>into pSB1T3</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Transform <br/> into TOP10</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>No colonies</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
+ | |||
+ | <td class="white arrow"> | ||
+ | <p>Propagate GFP in AH009</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>MiniPrep</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>Send to Slovenia</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | </table> | ||
+ | |||
+ | <div class="inner-container" style="margin: 5% 20% 5% 25%;"> | ||
+ | <p style="font-size:16px">Click <a href="https://static.igem.org/mediawiki/2015/e/e3/Aalto-Helsinki_week14.pdf" target="_blank">here</a> to read the full lab notes of week 14.</p></div> | ||
+ | |||
+ | </section> | ||
+ | <!-- Week 14 above --> | ||
+ | |||
+ | |||
+ | <!-- Week 15 below --> | ||
+ | <section id="week15" data-anchor="week15"> | ||
+ | |||
<h2 id="week15">Week 15</h2> | <h2 id="week15">Week 15</h2> | ||
+ | <table > | ||
+ | <tr> | ||
+ | <td class="bottomline rightline first"><h3 style="padding-top:0;margin-top:0;margin-bottom:0;padding-bottom:0;">Worked With</h3></td> | ||
+ | <td class="bottomline"><h3>WorkFlow</h3></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"><h3>August 24th -<br/> August 28th</h3></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Propane Plasmid 1 <br/> <span style="font-size:20px">Validation</span></h3></div></td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Prepare <br/>SDS-PAGE <br/>samples</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>Unclear <br/>results</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
+ | |||
+ | <td class="white arrow" > | ||
+ | <p>Analytical <br/> restriction</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>Wrong sized <br/>bands</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
+ | |||
+ | <td class="white arrow" > | ||
+ | <p>Prepared <br/>cells for <br/>purpald test</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Stored <br/>in -70°C</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Propane Plasmid 2<br/> <span style="font-size:20px">Construction</span></h3></div></td> | ||
+ | |||
+ | <td class="white arrow" > | ||
+ | <p>Repeat <br/>NEBuilder</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>Transform into TOP10</p> | ||
+ | </td> | ||
+ | |||
+ | </tr> | ||
+ | |||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
+ | |||
+ | <td class="white arrow" > | ||
+ | <p>Repeat <br/>NEBuilder <br/>with AH009</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Transform into TOP10</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>Colony PCR</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>GFP Biobrick <span style="font-size:20px"> Assembly</span></h3></div></td> | ||
+ | <td class="white arrow" > | ||
+ | <p>3A Assemble <br/>GFP + AH045 <br/>in pSB1K3</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Transform <br/> into TOP10</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>O/n cultues</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>MiniPrep</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>Restrict &<br/> Check <br/>on gel</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | |||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
+ | <td class="white arrow" > | ||
+ | <p>2A Assembly <br/> GFP + AH045 in pSB1K3</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Transform <br/> into TOP10</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p style="color:white">Store in +4 °C</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>GFP+Amph <span style="font-size:20px">Assembly</span></h3></div></td> | ||
+ | <td class="white arrow" > | ||
+ | <p style="font-size:12px">3A Assemble <br/>AH045-GFP + <br/>amphlinker in pSB1A3</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Transform <br/> into TOP10 <br/> over weekend</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | |||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Cellulose Plasmid <span style="font-size:20px">Construction</span></h3></div></td> | ||
+ | |||
+ | <td class="white arrow" > | ||
+ | <p>Repeat <br/>NEBuilder</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>Transform into TOP10</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
+ | |||
+ | <td class="white arrow" > | ||
+ | <p>Repeat <br/>NEBuilder <br/> with AH009</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Transform into TOP10</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>Colony PCR</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Amphiphilic Propane1</h3></div></td> | ||
+ | |||
+ | <td class="white arrow" > | ||
+ | <p>NEBuilder</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>Transform <br/> into TOP10</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>Colony PCR</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
+ | |||
+ | <td></td> | ||
+ | <td class="whitedown arrow" > | ||
+ | <p>O/n culture</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>MiniPrep</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | </table> | ||
+ | |||
+ | <div class="inner-container" style="margin: 5% 20% 5% 25%;"> | ||
+ | <p style="font-size:16px">Click <a href="https://static.igem.org/mediawiki/2015/e/ec/Aalto-Helsinki_week15.pdf" target="_blank">here</a> to read the full lab notes of week 15.</p></div> | ||
+ | |||
+ | </section> | ||
+ | <!-- Week 15 above --> | ||
+ | |||
+ | |||
+ | <!-- Week 16 below --> | ||
+ | <section id="week16" data-anchor="week16"> | ||
+ | |||
<h2 id="week16">Week 16</h2> | <h2 id="week16">Week 16</h2> | ||
+ | <table > | ||
+ | <tr> | ||
+ | <td class="bottomline rightline first"><h3 style="padding-top:0;margin-top:0;margin-bottom:0;padding-bottom:0;">Worked With</h3></td> | ||
+ | <td class="bottomline"><h3>WorkFlow</h3></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"><h3>August 31st -<br/> September 4th</h3></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Propane Plasmid 1 <br/> <span style="font-size:20px">Validation</span></h3></div></td> | ||
+ | <td class="white arrow" > | ||
+ | <p>New <br/>SDS-PAGE</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p style="color:white">Unclear </br>results</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | |||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | |||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Propane Plasmid 2<br/> <span style="font-size:20px">Construction</span></h3></div></td> | ||
+ | |||
+ | <td class="white arrow" > | ||
+ | <p>o/n culture <br/>of NEBuilder <br/>colonies</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>MiniPrep</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Restrict & <br/>check <br/>on gel</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>No insert</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Screen more <br/>colonies with <br/>colony PCR</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Cellulose Plasmid <span style="font-size:20px">Construction</span></h3></div></td> | ||
+ | |||
+ | |||
+ | <td class="white arrow" > | ||
+ | <p>o/n culture <br/>of NEBuilder <br/>colonies</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>MiniPrep</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Restrict & <br/>check <br/>on gel</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>No insert</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Screen more <br/>colonies with <br/>colony PCR</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | |||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Amph Propane 1<span style="font-size:20px"> Construction </span></h3></div></td> | ||
+ | |||
+ | <td class="red arrow" > | ||
+ | <p>Restrict & <br/> check <br/> on gel</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Re-do <br/>NEBuilder</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Transform <br/>into <br/>NEB5alpha</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>O/n cultures</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>MiniPrep</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>GFP Amph <span style="font-size:20px"> Assembly </span></h3></div></td> | ||
+ | |||
+ | <td class="white arrow" > | ||
+ | <p>O/n cultures</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>MiniPrep</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>Restrict & <br/> check<br/> on gel</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>O/n cultures <br/>of more <br/> colonies</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>MiniPrep, restrict<br/> & check<br/> on gel</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Prepare samples<br/> for microscopy</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Problem with<br/> imaging</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Amphiphilic Brick <span style="font-size:20px"> Assembly</span></h3></div></td> | ||
+ | <td class="white arrow" > | ||
+ | <p>PCR purification</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>3A assemble <br/>AH045 + Amph<br/> in pSB1C3</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Transform <br/> into TOP10</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>O/n cultures & MiniPrep</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>Restrict &<br/> Check <br/>on gel</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>More o/n cultures & MiniPrep</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Restrict &<br/> Check on gel,<br/> results unclear</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | |||
+ | </table> | ||
+ | |||
+ | <div class="inner-container" style="margin: 5% 20% 5% 25%;"> | ||
+ | <p style="font-size:16px">Click <a href="https://static.igem.org/mediawiki/2015/b/b1/Aalto-Helsinki_week16.pdf" target="_blank">here</a> to read the full lab notes of week 16.</p></div> | ||
+ | |||
+ | </section> | ||
+ | <!-- Week 16 above --> | ||
+ | |||
+ | |||
+ | <!-- Week 17 below --> | ||
+ | <section id="week17" data-anchor="week17"> | ||
+ | |||
<h2 id="week17">Week 17</h2> | <h2 id="week17">Week 17</h2> | ||
+ | <table > | ||
+ | <tr> | ||
+ | <td class="bottomline rightline first"><h3 style="padding-top:0;margin-top:0;margin-bottom:0;padding-bottom:0;">Worked With</h3></td> | ||
+ | <td class="bottomline"><h3>WorkFlow</h3></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"><h3>September 7th -<br/> September 11th</h3></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Propane Plasmid 1 <br/> <span style="font-size:20px">Validation</span></h3></div></td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Colony PCR <br/>with <br/>P001 & VR</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Results <br/>next week</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | |||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | |||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Propane Plasmid 2<br/> <span style="font-size:20px">Construction</span></h3></div></td> | ||
+ | |||
+ | <td class="white arrow" > | ||
+ | <p>o/n culture <br/>of NEBuilder <br/>colonies</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>MiniPrep</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Restrict & <br/>check <br/>on gel</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>AtoB maybe<br/> OK</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Restrict & <br/>check on <br/>gel again</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Unclear results</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Colony PCR,<br/> results <br/>next week</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Cellulose Plasmid <span style="font-size:20px">Construction</span></h3></div></td> | ||
+ | |||
+ | |||
+ | <td class="white arrow" > | ||
+ | <p>o/n culture <br/>of NEBuilder <br/>colonies</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>MiniPrep</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Restrict & <br/>check <br/>on gel</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>No insert</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p style="font-size:12px">Due to the time <br/>constraint, the <br/>construction is<br/> not repeated</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | |||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Amph Propane 1<span style="font-size:20px"> Construction </span></h3></div></td> | ||
+ | |||
+ | <td class="white arrow" > | ||
+ | <p>Restrict & <br/> check <br/> on gel</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>Incorrect size</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p style="font-size:12px">Due to the time <br/>constraint, the <br/>construction is<br/> not repeated</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>GFP Amph <span style="font-size:20px"> Assembly </span></h3></div></td> | ||
+ | |||
+ | <td class="white arrow" > | ||
+ | <p>Restrict & <br/> check on gel</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>Incorrect size</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Re-assemble</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>Transform <br/> into TOP10</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>GFP not <br/>expressed</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Transform old <br/>ligation mix <br/>into TOP10</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>GFP not <br/>expressed</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3><span style="font-size:20px"> Validation </span></h3></div></td> | ||
+ | |||
+ | <td class="white arrow" > | ||
+ | <p>Imaged with<br/> fluorescent <br/>microscope</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
+ | <td class="white arrow"> | ||
+ | <p>O/w culture<br/> for microscopy</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | |||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Amphiphilic Brick <span style="font-size:20px"> Assembly </span></h3></div></td> | ||
+ | |||
+ | <td class="white arrow" > | ||
+ | <p>Restrict & <br/> check on gel</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>Incorrect size</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Re-assemble</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>Transform <br/> into TOP10</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>O/n cultures</p> | ||
+ | </td> | ||
+ | |||
+ | <td class="blue arrow" > | ||
+ | <p>MiniPrep</p> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
+ | <td class="white arrow"> | ||
+ | <p>O/w culture<br/> for microscopy</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | |||
+ | |||
+ | </table> | ||
+ | |||
+ | <div class="inner-container" style="margin: 5% 20% 5% 25%;"> | ||
+ | <p style="font-size:16px">Click <a href="https://static.igem.org/mediawiki/2015/2/27/Aalto-Helsinki_week17.pdf" target="_blank">here</a> to read the full lab notes of week 17.</p></div> | ||
+ | |||
+ | </section> | ||
+ | <!-- Week 17 above --> | ||
+ | |||
+ | |||
+ | <!-- Week 18 below --> | ||
+ | <section id="week18" data-anchor="week18"> | ||
+ | |||
<h2 id="week18">Week 18</h2> | <h2 id="week18">Week 18</h2> | ||
+ | <table > | ||
+ | <tr> | ||
+ | <td class="bottomline rightline first"><h3 style="padding-top:0;margin-top:0;margin-bottom:0;padding-bottom:0;">Worked With</h3></td> | ||
+ | <td class="bottomline"><h3>WorkFlow</h3></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"></td> | ||
+ | <td class="bottomline"><h3>September 14th -<br/> September 18th</h3></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Propane Plasmid 1 <br/> <span style="font-size:20px">Validation</span></h3></div></td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>Checking <br/>colony PCR <br/>results</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | |||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Propane Plasmid 2<br/> <span style="font-size:20px">Construction</span></h3></div></td> | ||
+ | |||
+ | <td class="red arrow" > | ||
+ | <p>Checking <br/> colony PCR <br/>results</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdivlow"><h3></h3></div></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>GFP <span style="font-size:20px">Validation </span></h3></div></td> | ||
+ | |||
+ | <td class="white arrow" > | ||
+ | <p>Assembling <br/>AH046</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Restriction<br/> and ligation</p> | ||
+ | </td> | ||
+ | <td class="blue arrow" > | ||
+ | <p>Transform <br/>into TOP10</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>No blue <br/> colonies</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Re-assembling</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Transform<br/>into TOP10</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>No blue <br/> colonies</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
+ | |||
+ | <td class="white arrow" > | ||
+ | <p>Assembling <br/>AH047</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Restriction<br/> and ligation</p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Transform <br/>into TOP10</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>No blue <br/> colonies</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>GFP & Amph <span style="font-size:20px">Validation</span></h3></div></td> | ||
+ | |||
+ | |||
+ | <td class="white arrow" > | ||
+ | <p <span style="font-size:12px">Prepare samples <br/>for confocal <br/>microscope</span></p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Pictures <br/>taken by <br/>VTT</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>Amphiphilic <br/>structures<br/> not detected</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3></h3></div></td> | ||
+ | |||
+ | <td></td> | ||
+ | <td></td> | ||
+ | <td class="bluedown arrow" > | ||
+ | <p>GFP <br/>expression</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td class="first rightline"><div class="heightdiv"><h3>Amph Brick<span style="font-size:20px"></br>Validation</span></h3></div></td> | ||
+ | |||
+ | |||
+ | <td class="white arrow" > | ||
+ | <p <span style="font-size:12px">Prepare samples <br/>for confocal <br/>microscope</span></p> | ||
+ | </td> | ||
+ | <td class="white arrow" > | ||
+ | <p>Pictures <br/>taken by <br/>VTT</p> | ||
+ | </td> | ||
+ | <td class="red arrow" > | ||
+ | <p>Amphiphilic <br/>structures <br/>not detected</p> | ||
+ | </td> | ||
+ | </tr> | ||
+ | |||
+ | |||
+ | </table> | ||
+ | |||
+ | |||
+ | <div class="inner-container" style="margin: 5% 20% 5% 25%;"> | ||
+ | <p style="font-size:16px">Click <a href="https://static.igem.org/mediawiki/2015/f/fc/Aalto-Helsinki_week18.pdf" target="_blank">here</a> to read the full lab notes of week 18.</p></div> | ||
+ | |||
+ | |||
+ | |||
+ | </section> | ||
+ | <!-- Week 18 above --> | ||
+ | |||
+ | |||
+ | |||
+ | |||
+ | <p style="margin-bottom:0;padding-bottom:10%;"></p> | ||
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+ | <!-- NOTE: if you copy this script to other pages you'll likely have to modify it to have .inner-container instead of .plasmids in the lower function!! --> | ||
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+ | $('#sidenav a').on('click', function() { | ||
+ | |||
+ | var scrollAnchor = $(this).attr('data-scroll'), | ||
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Latest revision as of 04:29, 29 October 2015