Difference between revisions of "Team:Genspace"

 
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{{Genspace}}
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{{Template_All_Teams}}
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<html>
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<!-- https://2015.igem.org/Template:Genspace_index -->
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<head>  
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<!DOCTYPE html>
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<link rel="stylesheet" text="text/css" href="template.css">  
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<html lang="en"><head>
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    <meta charset="utf-8">
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    <meta http-equiv="X-UA-Compatible" content="IE=edge">
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    <meta name="viewport" content="width=device-width, initial-scale=1">
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    <!-- The above 3 meta tags *must* come first in the head; any other head content must come *after* these tags -->
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    <meta name="description" content="The Gowanus Canal is a heavily polluted waterway that runs through Brooklyn NY. A designated superfund site, it is slated for cleanup but nearby residents are concerned about the results. Our team is developing a biosensor for waste pollution, giving the community real time access to data on the health of the canal. Additionally we have mined the canal for extremophiles with interesting properties">
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    <meta name="author" content="genspace">
  
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<h2> Welcome to iGEM 2015! </h2>
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    <title>Gowanus SuperFUNd - Genspace iGEM 2015 </title>
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<p>Our team has been approved and we are ready to start the iGEM season! </p>
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<script src="https://cdnjs.cloudflare.com/ajax/libs/d3/3.5.5/d3.min.js" charset="utf-8"></script>
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    <!-- Bootstrap core CSS -->
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    <style type="text/css">
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    /*!
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    * Bootstrap v3.3.5 (http://getbootstrap.com)
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    * Copyright 2011-2015 Twitter, Inc.
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    * Licensed under MIT (https://github.com/twbs/bootstrap/blob/master/LICENSE)
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 +
    /* Slider */
 +
    .slick-slider
 +
    {
 +
        position: relative;
  
−
<script>
+
        display: block;
−
console.log(d3.selectAll('#contentContainer').html())
+
  
−
</script>
+
        -moz-box-sizing: border-box;
 +
            box-sizing: border-box;
  
−
<h4>Before you start: </h4>
+
        -webkit-user-select: none;
−
<p> Please read the following pages:</p>
+
          -moz-user-select: none;
−
<ul>
+
            -ms-user-select: none;
−
<li>  <a href="https://2015.igem.org/Requirements">Requirements page </a> </li>
+
                user-select: none;
−
<li> <a href="https://2015.igem.org/Wiki_How-To">Wiki Requirements page</a></li>
+
−
</ul>
+
  
−
<div class="highlightBox">
+
        -webkit-touch-callout: none;
−
<h4> Styling your wiki </h4>
+
        -khtml-user-select: none;
−
<p>You may style this page as you like or you can simply leave the style as it is. You can easily keep the styling and edit the content of these default wiki pages with your project information and completely fulfill the requirement to document your project.</p>
+
        -ms-touch-action: pan-y;
−
<p>While you may not win Best Wiki with this styling, your team is still eligible for all other awards. This default wiki meets the requirements, it improves navigability and ease of use for visitors, and you should not feel it is necessary to style beyond what has been provided.</p>
+
            touch-action: pan-y;
−
</div>
+
        -webkit-tap-highlight-color: transparent;
 +
    }
  
−
<h4> Editing your wiki </h4>
+
    .slick-list
−
<p>On this page you can document your project, introduce your team members, document your progress and share your iGEM experience with the rest of the world! </p>
+
    {
−
<p> <a href="https://2015.igem.org/wiki/index.php?title=Team:Genspace&action=edit"> Click here to edit this page! </a></p>
+
        position: relative;
−
<p>See tips on how to edit your wiki on the <a href="https://2015.igem.org/TemplatesforTeams_Code_Documentation">Template Documentation</a> page.</p>
+
  
 +
        display: block;
 +
        overflow: hidden;
  
−
<h4>Templates </h4>
+
        margin: 0;
−
<p> This year we have created templates for teams to use freely. More information on how to use and edit the templates can be found on the
+
        padding: 0;
−
<a href="https://2015.igem.org/TemplatesforTeams_Code_Documentation">Template Documentation </a> page.</p>
+
    }
 +
    .slick-list:focus
 +
    {
 +
        outline: none;
 +
    }
 +
    .slick-list.dragging
 +
    {
 +
        cursor: pointer;
 +
        cursor: hand;
 +
    }
  
 +
    .slick-slider .slick-track,
 +
    .slick-slider .slick-list
 +
    {
 +
        -webkit-transform: translate3d(0, 0, 0);
 +
          -moz-transform: translate3d(0, 0, 0);
 +
            -ms-transform: translate3d(0, 0, 0);
 +
            -o-transform: translate3d(0, 0, 0);
 +
                transform: translate3d(0, 0, 0);
 +
    }
  
−
<h4>Tips</h4>
+
    .slick-track
−
<p>This wiki will be your team’s first interaction with the rest of the world, so here are a few tips to help you get started: </p>
+
    {
−
<ul>
+
        position: relative;
−
<li>State your accomplishments! Tell people what you have achieved from the start. </li>
+
        top: 0;
−
<li>Be clear about what you are doing and how you plan to do this.</li>
+
        left: 0;
−
<li>You have a global audience! Consider the different backgrounds that your users come from.</li>
+
−
<li>Make sure information is easy to find; nothing should be more than 3 clicks away.  </li>
+
−
<li>Avoid using very small fonts and low contrast colors; information should be easy to read.  </li>
+
−
<li>Start documenting your project as early as possible; don’t leave anything to the last minute before the Wiki Freeze. For a complete list of deadlines visit the <a href="https://2015.igem.org/Calendar_of_Events">iGEM 2015 calendar</a> </li>
+
−
<li>Have lots of fun! </li>
+
−
</ul>
+
  
 +
        display: block;
 +
    }
 +
    .slick-track:before,
 +
    .slick-track:after
 +
    {
 +
        display: table;
  
−
<h4>Inspiration</h4>
+
        content: '';
−
<p> You can also view other team wikis for inspiration! Here are some examples:</p>
+
    }
−
<ul>
+
    .slick-track:after
−
<li> <a href="https://2014.igem.org/Team:SDU-Denmark/"> 2014 SDU Denmark </a> </li>
+
    {
−
<li> <a href="https://2014.igem.org/Team:Aalto-Helsinki">2014 Aalto-Helsinki</a> </li>
+
        clear: both;
−
<li> <a href="https://2014.igem.org/Team:LMU-Munich">2014 LMU-Munich</a> </li>
+
    }
−
<li> <a href="https://2014.igem.org/Team:Michigan"> 2014 Michigan</a></li>
+
    .slick-loading .slick-track
−
<li> <a href="https://2014.igem.org/Team:ITESM-Guadalajara">2014 ITESM-Guadalajara </a></li>
+
    {
−
<li> <a href="https://2014.igem.org/Team:SCU-China"> 2014 SCU-China </a></li>
+
        visibility: hidden;
−
</ul>
+
    }
  
−
<h4> Uploading pictures and files </h4>
+
    .slick-slide
−
<p> You can upload your pictures and files to the iGEM 2015 server. Remember to keep all your pictures and files within your team's namespace or at least include your team's name in the file name. <br />
+
    {
−
When you upload, set the "Destination Filename" to <code>Team:YourOfficialTeamName/NameOfFile.jpg</code>. (If you don't do this, someone else might upload a different file with the same "Destination Filename", and your file would be erased!)</p>
+
        display: none;
 +
        float: left;
  
−
<a href="https://2015.igem.org/Special:Upload">CLICK HERE TO UPLOAD FILES</a>
+
        height: 100%;
−
<h4>Our Location</h4>
+
        min-height: 1px;
−
                 <iframe src="https://www.google.com/maps/embed?pb=!1m18!1m12!1m3!1d3025.375378691334!2d-73.97977900000004!3d40.6877297!2m3!1f0!2f0!3f0!3m2!1i1024!2i768!4f13.1!3m3!1m2!1s0x89c25bb25464b153%3A0x663d26fd9a518085!2s33+Flatbush+Ave%2C+Brooklyn%2C+NY+11217!5e0!3m2!1sen!2sus!4v1435872806528" width="400" height="300" frameborder="0" style="border:0" allowfullscreen></iframe>
+
    }
 +
    [dir='rtl'] .slick-slide
 +
    {
 +
        float: right;
 +
    }
 +
    .slick-slide img
 +
    {
 +
        display: block;
 +
    }
 +
    .slick-slide.slick-loading img
 +
    {
 +
        display: none;
 +
    }
 +
    .slick-slide.dragging img
 +
    {
 +
        pointer-events: none;
 +
    }
 +
    .slick-initialized .slick-slide
 +
    {
 +
        display: block;
 +
    }
 +
    .slick-loading .slick-slide
 +
    {
 +
        visibility: hidden;
 +
    }
 +
    .slick-vertical .slick-slide
 +
    {
 +
        display: block;
 +
 
 +
        height: auto;
 +
 
 +
        border: 1px solid transparent;
 +
    }
 +
    .slick-arrow.slick-hidden {
 +
        display: none;
 +
    }
 +
    @charset 'UTF-8';
 +
    /* Slider */
 +
    .slick-loading .slick-list
 +
    {
 +
        background: #fff url('./ajax-loader.gif') center center no-repeat;
 +
    }
 +
 
 +
    /* Icons */
 +
    @font-face
 +
    {
 +
        font-family: 'slick';
 +
        font-weight: normal;
 +
        font-style: normal;
 +
 
 +
    }
 +
    /* Arrows */
 +
    .slick-prev,
 +
    .slick-next
 +
    {
 +
        font-size: 0;
 +
        line-height: 0;
 +
 
 +
        position: absolute;
 +
        top: 50%;
 +
 
 +
        display: block;
 +
 
 +
        width: 20px;
 +
        height: 20px;
 +
        margin-top: -10px;
 +
        padding: 0;
 +
 
 +
        cursor: pointer;
 +
 
 +
        color: transparent;
 +
        border: none;
 +
        outline: none;
 +
        background: transparent;
 +
    }
 +
    .slick-prev:hover,
 +
    .slick-prev:focus,
 +
    .slick-next:hover,
 +
    .slick-next:focus
 +
    {
 +
        color: transparent;
 +
        outline: none;
 +
        background: transparent;
 +
    }
 +
    .slick-prev:hover:before,
 +
    .slick-prev:focus:before,
 +
    .slick-next:hover:before,
 +
    .slick-next:focus:before
 +
    {
 +
        opacity: 1;
 +
    }
 +
    .slick-prev.slick-disabled:before,
 +
    .slick-next.slick-disabled:before
 +
    {
 +
        opacity: .25;
 +
    }
 +
 
 +
    .slick-prev:before,
 +
    .slick-next:before
 +
    {
 +
        font-family: 'slick';
 +
        font-size: 20px;
 +
        line-height: 1;
 +
 
 +
        opacity: .75;
 +
        color: white;
 +
 
 +
        -webkit-font-smoothing: antialiased;
 +
        -moz-osx-font-smoothing: grayscale;
 +
    }
 +
 
 +
    .slick-prev
 +
    {
 +
        left: -25px;
 +
    }
 +
    [dir='rtl'] .slick-prev
 +
    {
 +
        right: -25px;
 +
        left: auto;
 +
    }
 +
    .slick-prev:before
 +
    {
 +
        content: '←';
 +
    }
 +
    [dir='rtl'] .slick-prev:before
 +
    {
 +
        content: '→';
 +
    }
 +
 
 +
    .slick-next
 +
    {
 +
        right: -25px;
 +
    }
 +
    [dir='rtl'] .slick-next
 +
    {
 +
        right: auto;
 +
        left: -25px;
 +
    }
 +
    .slick-next:before
 +
    {
 +
        content: '→';
 +
    }
 +
    [dir='rtl'] .slick-next:before
 +
    {
 +
        content: '←';
 +
    }
 +
 
 +
    /* Dots */
 +
    .slick-slider
 +
    {
 +
        margin-bottom: 30px;
 +
    }
 +
 
 +
    .slick-dots
 +
    {
 +
        position: absolute;
 +
        bottom: -45px;
 +
 
 +
        display: block;
 +
 
 +
        width: 100%;
 +
        padding: 0;
 +
 
 +
        list-style: none;
 +
 
 +
        text-align: center;
 +
    }
 +
    .slick-dots li
 +
    {
 +
        position: relative;
 +
 
 +
        display: inline-block;
 +
 
 +
        width: 20px;
 +
        height: 20px;
 +
        margin: 0 5px;
 +
        padding: 0;
 +
 
 +
        cursor: pointer;
 +
    }
 +
    .slick-dots li button
 +
    {
 +
        font-size: 0;
 +
        line-height: 0;
 +
 
 +
        display: block;
 +
 
 +
        width: 20px;
 +
        height: 20px;
 +
        padding: 5px;
 +
 
 +
        cursor: pointer;
 +
 
 +
        color: transparent;
 +
        border: 0;
 +
        outline: none;
 +
        background: transparent;
 +
    }
 +
    .slick-dots li button:hover,
 +
    .slick-dots li button:focus
 +
    {
 +
        outline: none;
 +
    }
 +
    .slick-dots li button:hover:before,
 +
    .slick-dots li button:focus:before
 +
    {
 +
        opacity: 1;
 +
    }
 +
    .slick-dots li button:before
 +
    {
 +
        font-family: 'slick';
 +
        font-size: 6px;
 +
        line-height: 20px;
 +
 
 +
        position: absolute;
 +
        top: 0;
 +
        left: 0;
 +
 
 +
        width: 20px;
 +
        height: 20px;
 +
 
 +
        content: '•';
 +
        text-align: center;
 +
 
 +
        opacity: .25;
 +
        color: black;
 +
 
 +
        -webkit-font-smoothing: antialiased;
 +
        -moz-osx-font-smoothing: grayscale;
 +
    }
 +
    .slick-dots li.slick-active button:before
 +
    {
 +
        opacity: .75;
 +
        color: black;
 +
    }
 +
    </style>
 +
 
 +
      <style>
 +
        #bodyContent a[href ^="https://"],.link-https{padding-right:0}img.circuit{max-width:400px}.sponsors{height:900px;}.sponsors ul{width:100%}.sponsors img{float:left;max-width:250px;display:block;margin:20px 5%}#content{width:100%}#page{margin:auto;float:none;z-index:1;position:relative;padding:160px 15px 0;}#page.safety{padding:60px 15px 0}#page.home{padding:30px 15px 0}#page a{color:#1fae6b;background-color:#fff}#page a:hover{color:#1a8a55}.clear{clear:both;height:0}.gal{display:inline-block}.gallery{background:#fff;}.gallery div{width:100%;margin:auto;}.gallery div img{display:block;width:100%}html{position:relative;min-height:100%}body{margin-bottom:60px}h1,h2{text-decoration:none;border-bottom:0}.footer{display:none;position:fixed;bottom:0;width:100%;height:60px;background-color:#f5f5f5}@media only screen and (max-width:992px){.container{width:95%}}@media only screen and (max-width:767px){.container{width:95%}}.navbar-default{padding-top:16px}.container>.navbar-header{width:100%;min-height:80px}.navbar>.container .navbar-brand{padding-top:8px}.navbar-default{background-color:#fff;border-color:#e7e7e7}.navbar-default .navbar-nav>li>a:hover{color:#1fae6b}.navbar-toggle{float:left;margin-left:8px}@media only screen and (max-width:992px){.nav.navbar-nav{width:90%}}.nav>li>a{position:relative;display:block;color:#1fae6b;text-transform:uppercase;padding:10px;font-size:14px;}@media only screen and (max-width:1200px){.nav>li>a{padding:5px;font-size:13px}}.nav>li>a:hover{color:#1a8a55}.navbar-header img.genspace{width:260px;max-width:50%;margin:10px 0 10px 10px;}@media only screen and (max-width:767px){.navbar-header img.genspace{margin:10px}}.navbar-header .navbar-brand{float:right;}@media only screen and (max-width:767px){.navbar-header .navbar-brand{padding:5px}}.navbar-header .navbar-brand #logo{width:100px;max-width:100px;height:auto;}@media only screen and (max-width:767px){.navbar-header .navbar-brand #logo{width:80px;height:80px}}h2.lead{font-size:22px}h4{margin:20px 0;}h4 .lead{font-size:16px;}@media only screen and (max-width:1200px){h4 .lead{font-size:14px}}.lead{font-size:21px;}@media only screen and (max-width:1200px){.lead{font-size:18px}}body{margin:0;padding:0;width:100%}ul li{list-style:none}.underline{text-decoration:underline}.strike{text-decoration:line-through}.container .text-muted{margin:20px 0;color:#e7e7e7}.footer > .container{padding-right:15px;padding-left:15px}code{font-size:80%}.green{color:#1fae6b}.section{padding:20px;margin:30px 0;display:block}.background{background-color:rgba(255,255,255,0.8);position:fixed;width:100%;height:100%;top:0}.mapBackground{background:url("https://static.igem.org/mediawiki/2015/5/55/Gowanus_canal.jpg");background-size:cover;position:fixed;top:0;width:100%;height:100%}.teamBackground{background:url("https://static.igem.org/mediawiki/2015/6/6d/Genspace_teamphoto_web.jpg");background-position:center center;background-repeat:no-repeat;background-size:cover;position:absolute;top:0;width:100%;height:100%}.banner{display:block;width:100%;height:65%}#page.home .row{margin:30px 0;}#page.home .row .section{margin:30px 0;background-color:rgba(255,255,255,0.8)}#mapimg,#map{z-index:0;position:fixed;top:0;width:100%;display:none}.showMap #mapimg,.showMap #map{display:block;position:absolute}video{margin:auto;display:block;height:640px;width:100%;}@media only screen and (max-width:1200px){video{width:80%;height:640px}}@media only screen and (max-width:990px){video{height:480px}}p.video{text-align:center}svg .outline,svg .sites{opacity:0}svg .outline{fill:#1fae6b;stroke:#1a8a55}svg.showOutline .outline{opacity:.1}svg.showOutline .sites{opacity:1}.dropdown-menu{text-transform:capitalize}.expand>.dropdown-menu{display:block}.heading{border-bottom:2px solid #e7e7e7;padding:10px 0;text-transform:capitalize}img.bio{width:100%}.row{z-index:1;position:relative;}.row img.genspace{max-width:420px;margin-bottom:20px}.row.intro img{width:100%;max-width:600px;}@media only screen and (max-width:992px){.row.intro img{margin:20px auto;display:block}}.teamIntro{width:95%;margin:auto}.team.container{padding-top:0}.team .member .lead{text-transform:capitalize}.parts ul{margin:60px 30px 60px 0}.parts .row{background-color:rgba(255,255,255,0.8);z-index:0;position:relative;border-top:0 solid #c7c7c7;margin:40px 0 80px}.parts .header{margin:0;background-color:rgba(255,255,255,0);border-top:0 solid #c7c7c7}.parts .partType{font-size:18px;font-weight:700;padding-top:40px;text-align:left}.parts .section{margin:20px}.parts svg{pointer-events:none}.construct-map{transform:scale(1.3) translate(-50px,20px);}@media only screen and (max-width:1200px){.construct-map{transform:scale(1.2) translate(-70px,20px)}}table{margin:30px 40px;width:90%;font-size:.98em;}table td.col{text-align:center}table tr:first-child{border-bottom:1px solid #373737}table td.col1,table td.col4{text-align:left}table .col2{font-size:32px}table .col3{padding:0 10px}table .col4{width:30%}table .header .col2{font-size:.99em;}@media only screen and (max-width:767px){table .header .col2{font-size:.98em}}table .header td.col{font-size:1em;font-weight:700}#page .partNav.lead{padding:5px;font-size:1em}.weekNav.lead{padding:5px;font-size:16px}.week{margin:0 0 20px;padding:0 0 60px;border-bottom:2px solid #c7c7c7;}.week .header{margin:20px}.week .section{background-color:rgba(255,255,255,0.8);padding:20px;margin:0;}.week .section img{width:100%;margin:20px auto;display:block;}.week .section img.small{max-width:500px}.week .section img.col2{margin:20px 1%;max-width:46%;float:left}.fancybox{padding:0}.gal{margin-bottom:20px;}.gal .caption{width:100%;font-size:14px;margin-top:-40px}.quote{width:80%;margin-left:5%}.human .section,.colab .section,.safety .section,.attributions .section{background-color:rgba(255,255,255,0.8);padding:20px;margin:40px 0;}.human .section:first-child,.colab .section:first-child,.safety .section:first-child,.attributions .section:first-child{margin:0}.human .section .lead,.colab .section .lead,.safety .section .lead,.attributions .section .lead{font-size:16px}.human .section img,.colab .section img,.safety .section img,.attributions .section img{width:100%;margin:40px auto;display:block;}.human .section img.small,.colab .section img.small,.safety .section img.small,.attributions .section img.small{max-width:500px}.human .section img.col2,.colab .section img.col2,.safety .section img.col2,.attributions .section img.col2{margin:20px 1%;max-width:46%;float:left}.human .section img.col3,.colab .section img.col3,.safety .section img.col3,.attributions .section img.col3{margin:20px .5%;max-width:32%;float:left}.design .gal{width:60%;margin:60px auto;display:block}.human .practice .lead{margin-bottom:10px}.attributions .member{width:100%;margin:10px 0;display:inline-block}.attributions p{margin:0;line-height:18px;width:auto}.attributions .name{float:left;width:25%;}@media only screen and (max-width:767px){.attributions .name{width:30%}}.attributions .attribution{width:65%;text-transform:capitalize;float:left}/*# sourceMappingURL=index.css.map */
 +
      </style>
 +
    </head>
 +
 
 +
    <body>
 +
 
 +
 
 +
 
 +
      <!-- Fixed navbar -->
 +
      <nav class="navbar navbar-default navbar-fixed-top">
 +
        <div class="container">
 +
          <div class="navbar-header">
 +
            <button type="button" class="navbar-toggle" data-toggle="collapse" data-target="#navbar" aria-expanded="false" aria-controls="navbar">
 +
              <span class="sr-only">Toggle navigation</span>
 +
              <span class="icon-bar"></span>
 +
              <span class="icon-bar"></span>
 +
              <span class="icon-bar"></span>
 +
            </button>
 +
            <img class="genspace" src="https://static.igem.org/mediawiki/2015/2/23/Columbia_NYC_GenspaceLogo.png" alt="">
 +
            <a class="navbar-brand" href="#"><img id="logo" src="https://static.igem.org/mediawiki/2015/a/a3/IGEM-genspace-logo-lg.png" alt=""></a>
 +
          </div>
 +
          <div id="navbar" class="collapse navbar-collapse">
 +
            <ul class="nav navbar-nav">
 +
              <li class="active dropdown">
 +
                <a href="https://2015.igem.org/Team:Genspace" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-haspopup="true" aria-expanded="false">Home<span class="caret"></span></a>
 +
                 <ul class="dropdown-menu">
 +
                  <li><a href="https://2015.igem.org/Team:Genspace#accomplishment">Accomplishments</a></li>
 +
                </ul>
 +
              </li>
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                <a href="https://2015.igem.org/Team:Genspace/Description" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-haspopup="true" aria-expanded="false">PROJECT<span class="caret"></span></a>
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                  <li><a href="https://2015.igem.org/Team:Genspace/Description#background">Background</a></li>
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                  <li><a href="https://2015.igem.org/Team:Genspace/Description#biosensor">Biosensor</a></li>
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                  <li><a href="https://2015.igem.org/Team:Genspace/Description#microbiome">Mining the Microbiome</a></li>
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              <li><a href="https://2015.igem.org/Team:Genspace/Design">Design</a></li>
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              <li><a href="https://2015.igem.org/Team:Genspace/Practices">HUMAN PRACTICES</a></li>
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              <li><a href="https://2015.igem.org/Team:Genspace/Safety">SAFETY</a></li>
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          <div class="page-header">
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            <h1> <b>Super<span class="green">FUN</span>d Gowanus!</b>  </h1>
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          </div>
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          <p class="lead">The Gowanus Canal is a heavily polluted waterway that runs through Brooklyn NY. A designated superfund site, it is slated for cleanup but nearby residents are concerned about the results. Our team is developing a biosensor for waste pollution, giving the community real time access to data on the health of the canal. Additionally we have mined the canal for extremophiles with interesting properties.</p>
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          <source src="https://static.igem.org/mediawiki/2015/c/c4/GowanusCanal_med.mp4" type="video/mp4">
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        </video> <p><a href="https://vimeo.com/131812676" target="_blank">What&#039;s In Brooklyn&#039;s Gowanus Canal?</a> Used with permission from <a href="https://vimeo.com/hakaimagazine">Hakai Magazine</a></p>
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      <a name="accomplishment"></a>
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                      ol.lst-kix_7julhkrcul7w-4.start {
 +
                          counter-reset: lst-ctn-kix_7julhkrcul7w-4 0
 +
                      }
 +
                      .lst-kix_7julhkrcul7w-6>li {
 +
                          counter-increment: lst-ctn-kix_7julhkrcul7w-6
 +
                      }
 +
                      .lst-kix_rwyb0xxza0s0-1>li:before {
 +
                          content: "\0025cb  "
 +
                      }
 +
                      .lst-kix_rwyb0xxza0s0-2>li:before {
 +
                          content: "\0025a0  "
 +
                      }
 +
                      .lst-kix_rwyb0xxza0s0-0>li:before {
 +
                          content: "\0025cf  "
 +
                      }
 +
                      .lst-kix_rwyb0xxza0s0-4>li:before {
 +
                          content: "\0025cb  "
 +
                      }
 +
                      ol.lst-kix_7julhkrcul7w-6.start {
 +
                          counter-reset: lst-ctn-kix_7julhkrcul7w-6 0
 +
                      }
 +
                      .lst-kix_rwyb0xxza0s0-3>li:before {
 +
                          content: "\0025cf  "
 +
                      }
 +
                      .lst-kix_7julhkrcul7w-5>li {
 +
                          counter-increment: lst-ctn-kix_7julhkrcul7w-5
 +
                      }
 +
                      ol.lst-kix_7julhkrcul7w-3.start {
 +
                          counter-reset: lst-ctn-kix_7julhkrcul7w-3 0
 +
                      }
 +
                      .lst-kix_7julhkrcul7w-4>li {
 +
                          counter-increment: lst-ctn-kix_7julhkrcul7w-4
 +
                      }
 +
                      ol.lst-kix_7julhkrcul7w-0.start {
 +
                          counter-reset: lst-ctn-kix_7julhkrcul7w-0 0
 +
                      }
 +
                      .lst-kix_58b55dom0f3i-8>li:before {
 +
                          content: "\0025a0  "
 +
                      }
 +
                      ul.lst-kix_58b55dom0f3i-1 {
 +
                          list-style-type: none
 +
                      }
 +
                      ul.lst-kix_58b55dom0f3i-0 {
 +
                          list-style-type: none
 +
                      }
 +
                      ol.lst-kix_7julhkrcul7w-2.start {
 +
                          counter-reset: lst-ctn-kix_7julhkrcul7w-2 0
 +
                      }
 +
                      .lst-kix_7julhkrcul7w-0>li:before {
 +
                          content: "" counter(lst-ctn-kix_7julhkrcul7w-0, decimal)". "
 +
                      }
 +
                      .lst-kix_7julhkrcul7w-1>li:before {
 +
                          content: "" counter(lst-ctn-kix_7julhkrcul7w-1, lower-latin)". "
 +
                      }
 +
                      ul.lst-kix_58b55dom0f3i-8 {
 +
                          list-style-type: none
 +
                      }
 +
                      ul.lst-kix_58b55dom0f3i-7 {
 +
                          list-style-type: none
 +
                      }
 +
                      ul.lst-kix_58b55dom0f3i-6 {
 +
                          list-style-type: none
 +
                      }
 +
                      ul.lst-kix_58b55dom0f3i-5 {
 +
                          list-style-type: none
 +
                      }
 +
                      .lst-kix_rwyb0xxza0s0-8>li:before {
 +
                          content: "\0025a0  "
 +
                      }
 +
                      .lst-kix_7julhkrcul7w-3>li:before {
 +
                          content: "" counter(lst-ctn-kix_7julhkrcul7w-3, decimal)". "
 +
                      }
 +
                      ul.lst-kix_58b55dom0f3i-4 {
 +
                          list-style-type: none
 +
                      }
 +
                      ul.lst-kix_58b55dom0f3i-3 {
 +
                          list-style-type: none
 +
                      }
 +
                      ul.lst-kix_58b55dom0f3i-2 {
 +
                          list-style-type: none
 +
                      }
 +
                      .lst-kix_rwyb0xxza0s0-5>li:before {
 +
                          content: "\0025a0  "
 +
                      }
 +
                      .lst-kix_rwyb0xxza0s0-6>li:before {
 +
                          content: "\0025cf  "
 +
                      }
 +
                      .lst-kix_rwyb0xxza0s0-7>li:before {
 +
                          content: "\0025cb  "
 +
                      }
 +
                      .lst-kix_7julhkrcul7w-2>li:before {
 +
                          content: "" counter(lst-ctn-kix_7julhkrcul7w-2, lower-roman)". "
 +
                      }
 +
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 +
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                      .title {
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                      }
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                  </style>
 +
                  <p class="c0 c1 c15"><span class="c7"></span></p>
 +
                  <p class="c0 c1 c15"><span class="c7"></span></p>
 +
                  <p class="c0 c1 c15"><span class="c7"></span></p>
 +
                  <p class="c0 c1 c15"><span class="c7"></span></p>
 +
                  <p class="c0 c1 c15"><span class="c7"></span></p>
 +
                  <p class="c0 c1 c15"><span class="c7"></span></p>
 +
                  <p class="c0"><span class="c12 c4 c10">Accomplishments</span>
 +
                  </p>
 +
                  <p class="c0 c1"><span class="c4 c10 c12"></span>
 +
                  </p>
 +
                  <p class="c0"><span class="c8 c10 c13">The Genspace 2015 iGEM Team has fulfilled all Bronze, Silver and Gold Medal Criteria</span>
 +
                  </p>
 +
                  <p class="c0 c1"><span></span>
 +
                  </p>
 +
                  <p class="c0"><span class="c8 c4">Requirements for a Bronze Medal:</span>
 +
                  </p>
 +
                  <p class="c0 c1"><span></span>
 +
                  </p>
 +
                  <p class="c0"><span class="c2">✔ </span><span>Registered the team, had a </span><span class="c4">great</span><span>&nbsp;summer, and will have fun at the Giant Jamboree.</span>
 +
                  </p>
 +
                  <p class="c0 c1"><span></span>
 +
                  </p>
 +
                  <p class="c0"><span class="c2">✔ </span><span>Successfully completed and submitted the iGEM 2015 Judging form.</span>
 +
                  </p>
 +
                  <p class="c0 c1"><span></span>
 +
                  </p>
 +
                  <p class="c0"><span class="c2">✔ </span><span>Created and shared a Description of the team's project using the iGEM wiki, and documented the team's parts using the Registry of Standard Biological Parts.</span>
 +
                  </p>
 +
                  <p class="c0 c1"><span></span>
 +
                  </p>
 +
                  <p class="c0"><span class="c2">✔ </span><span>Will</span><span>&nbsp;present a Poster and Talk at the iGEM Jamboree.</span>
 +
                  </p>
 +
                  <p class="c0 c1"><span></span>
 +
                  </p>
 +
                  <p class="c0"><span class="c2">✔ </span><span>Created a page on our team wiki with clear attribution of each aspect of our project. See </span><span class="c4 c5"><a class="c3" href="https://www.google.com/url?q=https://2015.igem.org/Team:Genspace/Attributions&amp;sa=D&amp;usg=AFQjCNGfPDue_fRCBfA-YwjVZQ17rBJJ5Q">https://2015.igem.org/Team:Genspace/Attributions</a></span>
 +
                  </p>
 +
                  <p class="c0 c1"><span></span>
 +
                  </p>
 +
                  <p class="c0"><span class="c2">✔ </span><span>Interacted with our community by creating several engaging activities showcasing iGEM, synthetic biology and community labs, including public engagement at the New York Hall of Science and a presentation/public discussion with members of the Gowanus Canal Conservancy. See </span>
 +
                      <span
 +
                      class="c4 c5"><a class="c3" href="https://www.google.com/url?q=https://2015.igem.org/Team:Genspace/Practices&amp;sa=D&amp;usg=AFQjCNG1qqtdaZu9aOEv2OpMd2Lv_n2-xA">https://2015.igem.org/Team:Genspace/Practices</a>
 +
                          </span>
 +
                  </p>
 +
                  <p class="c0 c1"><span></span>
 +
                  </p>
 +
                  <p class="c0"><span class="c4 c8">Additional Requirements for a Silver Medal:</span>
 +
                  </p>
 +
                  <p class="c0 c1"><span></span>
 +
                  </p>
 +
                  <p class="c0"><span class="c2">✔ </span><span>Helped a registered iGEM team from another institution in a significant way by characterizing an mCherry-based reporter system for the UGA-Georgia team. We also helped several other teams (University of Michigan, Paris-Bettencourt, Cooper Union and Columbia University) in different ways. See </span>
 +
                      <span
 +
                      class="c4 c5"><a class="c3" href="https://www.google.com/url?q=https://2015.igem.org/Team:Genspace/Collaborations&amp;sa=D&amp;usg=AFQjCNFKdyYAuX0oQ1iVtkvmvQuvzG5CmA">https://2015.igem.org/Team:Genspace/Collaborations</a>
 +
                          </span>
 +
                  </p>
 +
                  <p class="c0 c1"><span></span>
 +
                  </p>
 +
                  <p class="c0"><span class="c2">✔ </span><span>Demonstrated a functional prototype of our project. We tested a prototype biosensor for human waste (submitted </span><span class="c6">Part:BBa_K1799019</span><span>). We showed this system works under real-world conditions simulated in the lab by addition of HSL to the cultures. See: </span>
 +
                      <span
 +
                      class="c4 c5"><a class="c3" href="https://www.google.com/url?q=https://2015.igem.org/Team:Genspace/Design&amp;sa=D&amp;usg=AFQjCNEdMAxZQHVnU-mR4Lo17z61k7Pryw">https://2015.igem.org/Team:Genspace/Design</a>
 +
                          </span>
 +
                  </p>
 +
                  <p class="c0 c1"><span></span>
 +
                  </p>
 +
                  <p class="c0"><span class="c2">✔ </span><span>iGEM projects involve important questions beyond the bench, for example relating to (but not limited to) ethics, sustainability, social justice, safety, security, and intellectual property rights. Our team identified, investigated and addressed the </span>
 +
                      <span
 +
                      class="c4">unique security issues</span><span>&nbsp;presented by deploying a biosensor along a public waterway in the city that experienced the 911 attacks. See </span><span class="c4 c5"><a class="c3" href="https://www.google.com/url?q=https://2015.igem.org/Team:Genspace/Practices&amp;sa=D&amp;usg=AFQjCNG1qqtdaZu9aOEv2OpMd2Lv_n2-xA">https://2015.igem.org/Team:Genspace/Practices</a></span>
 +
                  </p>
 +
                  <p class="c0 c1"><span></span>
 +
                  </p>
 +
                  <p class="c0"><span class="c8 c4">Additional Requirements for a Gold Medal:</span>
 +
                  </p>
 +
                  <p class="c0 c1"><span></span>
 +
                  </p>
 +
                  <p class="c0"><span class="c2">✔</span><span>&nbsp;We e</span><span>xpanded on our silver medal Human Practices activity by integrating the investigated issues into the design and/or execution of your project. See &nbsp;</span><span class="c4 c5"><a class="c3" href="https://www.google.com/url?q=https://2015.igem.org/Team:Genspace/Practices&amp;sa=D&amp;usg=AFQjCNG1qqtdaZu9aOEv2OpMd2Lv_n2-xA">https://2015.igem.org/Team:Genspace/Practices</a></span>
 +
                  </p>
 +
                  <p class="c0 c1"><span></span>
 +
                  </p>
 +
                  <p class="c0"><span class="c2">✔ </span><span>We have documented a new standard BioBrick Device central to our project and submitted this part to the iGEM Registry.We have also documented a new application of a BioBrick part from a previous iGEM year, since the Device was made up of two parts previously submitted to the Registry. We have added that documentation to the parts’ main pages. See </span>
 +
                      <span
 +
                      class="c4 c5"><a class="c3" href="https://www.google.com/url?q=https://2015.igem.org/Team:Genspace/Parts&amp;sa=D&amp;usg=AFQjCNFdrNhe2sMCsr5lOELEik7nn4cSYw">https://2015.igem.org/Team:Genspace/Parts</a>
 +
                          </span>
 +
                  </p>
 +
                  <p class="c0"><span>Part Numbers:</span><span class="c6">Part:BBa_K1799019, Part:BBa_C0062, Part:BBa_I732005</span>
 +
                  </p>
 +
                  <p class="c0 c1"><span class="c6"></span>
 +
                  </p>
 +
                  <p class="c0"><span class="c2">✔ </span><span class="c6">We improved a part submitted by a previous year iGEM team. The pLsrA promoter Part:BBa_K117002 &nbsp;submitted in 2008 by team </span><span class="c6 c10">NTU-Singapore </span><span class="c6">was reported not to work by the Tokyo Tech team in 2011, and the DNA was reported to not be what was documented in the registry. We synthesized the corrected part, added it to registry as Part Bba_</span><span>K1799000</span>
 +
                      <span
 +
                      class="c6">, and showed that it works, documenting this in the registry pages of both BBa_K117002 and Bba_</span><span>K1799000</span><span class="c6">. </span><span>See </span><span class="c4 c5"><a class="c3" href="https://www.google.com/url?q=https://2015.igem.org/Team:Genspace/Parts&amp;sa=D&amp;usg=AFQjCNFdrNhe2sMCsr5lOELEik7nn4cSYw">https://2015.igem.org/Team:Genspace/Parts</a></span>
 +
                  </p>
 +
                  <p class="c0"><span class="c6">Part Numbers:</span><span class="c4 c5"><a class="c3" href="https://www.google.com/url?q=http://parts.igem.org/Part:BBa_K1799000&amp;sa=D&amp;usg=AFQjCNFz1pko_sOC95TSj808HiacUsZgMQ">Bba_K1799000</a></span><span>, </span><span class="c4 c5"><a class="c3" href="https://www.google.com/url?q=http://parts.igem.org/Part:BBa_K117002:Experience&amp;sa=D&amp;usg=AFQjCNEDiL_775lhnlMRnUGKwijhf4owow">BBa_K117002</a></span>
 +
                  </p>
 +
                  <p class="c0 c1"><span></span>
 +
                  </p>
 +
                  <p class="c0"><span class="c2">✔</span><span>&nbsp;</span><span>We have experimentally validated that two BioBrick Parts of our own design and construction work as expected. We have documented the characterization of these parts in the Main Page section of the Registry entry for that Part/Device. These working parts are different from the part documented in Gold medal criterion #2.</span>
 +
                  </p>
 +
                  <p class="c0"><span>See </span><span class="c4 c5"><a class="c3" href="https://www.google.com/url?q=https://2015.igem.org/Team:Genspace/Parts&amp;sa=D&amp;usg=AFQjCNFdrNhe2sMCsr5lOELEik7nn4cSYw">https://2015.igem.org/Team:Genspace/Parts</a></span>
 +
                  </p>
 +
                  <p class="c0"><span>Part Numbers:</span><span class="c6">Part:</span><span class="c4 c5"><a class="c3" href="https://www.google.com/url?q=http://parts.igem.org/Part:BBa_K1799000&amp;sa=D&amp;usg=AFQjCNFz1pko_sOC95TSj808HiacUsZgMQ">BBa_K1799000</a></span><span class="c6">, Part:BBa_K1799002</span>
 +
                  </p>
 +
                  <p class="c0 c1"><span></span>
 +
                  </p>
 +
                  <p class="c0 c1"><span></span>
 +
                  </p>
 +
                  <p class="c0 c1"><span></span>
 +
                  </p>
 +
                  <p class="c0 c1"><span></span>
 +
                  </p>
 +
                  <p class="c0 c1"><span></span>
 +
                  </p>
 +
                  <p class="c0 c1"><span class="c9"></span>
 +
                  </p>
 +
                  <p class="c0 c1"><span></span>
 +
                  </p>
 +
              </div>
 +
 
 +
          </div>
 +
      </div>
 +
      <div class="row">
 +
        <h2>Sponsors</h2>
 +
        <div class="section sponsors">
 +
          <p class="c0 c1"><span></span>
 +
          </p><p class="c0 c1"><span></span>
 +
          </p>
 +
          <p><b>A very special thanks to:</b></p>
 +
          <ul>
 +
            <li>
 +
              <p class="lead">Dr. Tom Knight</p>
 +
            </li>
 +
            <li>
 +
              <p class="lead">Mr. and Mrs. Giddins</p>
 +
            </li>
 +
            <li>
 +
              <p class="lead">Rachel Young</p>
 +
            </li> 
 +
          </ul>     
 +
         
 +
            <img src="https://static.igem.org/mediawiki/2015/c/c8/Neb_logo_high_resolution.jpg" alt="">
 +
            <img src="https://static.igem.org/mediawiki/2015/2/22/IDT-Logo.jpg" alt="">
 +
            <img src="https://static.igem.org/mediawiki/2015/c/ce/NY_SynBio_Final4.png" alt="">
 +
            <img src="https://static.igem.org/mediawiki/2015/9/90/Synbiota_logo.png" alt="">
 +
            <img src="https://static.igem.org/mediawiki/2015/3/3b/Twist-Transparent-BG-01.png" alt="">
 +
            <img src="https://static.igem.org/mediawiki/2015/f/f4/FlanaGen-header3.png" alt="">
 +
          <p class="c0 c1"><span></span>
 +
          </p>
 +
          <p class="c0 c1"><span></span>
 +
                  </p>
 +
                  <p class="c0 c1"><span></span>
 +
                  </p>
 +
        </div>
 +
      </div>
 +
    </div>
 +
 
 +
    <footer class="footer">
 +
      <div class="container">
 +
        <p class="text-muted">Place sticky footer content here.</p>
 +
      </div>
 +
    </footer>
 +
 
 +
    <script type="text/javascript">
 +
    //god awful hack to get this to work
 +
    $(function(){
 +
        $.get( "https://static.igem.org/mediawiki/2015/a/a7/D3.min.txt", function( data ) {
 +
            var resourceContent = data; // can be a global variable too...
 +
            $('body').append($('<script>').html(data))
 +
 
 +
            d3.selectAll('.dropdown')
 +
              .on('mouseover',function(){ this.classList.add('expand') })
 +
              .on('mouseout',function(){ this.classList.remove('expand') })
 +
 
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            var map = d3.select('#map')
 +
            var img = d3.select('#mapimg')
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            var content = d3.select('#page')
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            size()
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            function size () {
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              img.style({
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 +
              // content.style({
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              //  height:img.node().getBoundingClientRect().height,
 +
              // })
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 +
 
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            d3.select(window).on('resize.index',size)
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 +
            d3.selectAll('video')
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              .on('click',function(){
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                  this.play()
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              })
 +
 
 +
            $.get( "https://static.igem.org/mediawiki/2015/4/46/Slick.min.txt", function( data ) {
 +
                var resourceContent = data; // can be a global variable too...
 +
                var find = 'amp;';
 +
                var re = new RegExp(find, 'g');
 
                  
 
                  
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+
                $('body').append($('<script>').html(data.replace(re,'')))
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+
                $('.gallery').slick({
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</div></div> <!--These are the closing tags for div id="mainContainer" and div id="contentContainer". The corresponding opening tags appear in the template that is {{included}} at the top of this page.-->
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 +
                });
 +
                  d3.selectAll('.slick-slide').style('max-height',.7*window.innerHeight+'px')
 +
             
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 +
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 +
    });
 +
    </script>
 +
   
  
−
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+
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 +
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    <!-- // <script src="js/shared.js"></script> -->
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</body></html>

Latest revision as of 01:33, 10 November 2015

<!DOCTYPE html> Gowanus SuperFUNd - Genspace iGEM 2015

SuperFUNd Gowanus!

The Gowanus Canal is a heavily polluted waterway that runs through Brooklyn NY. A designated superfund site, it is slated for cleanup but nearby residents are concerned about the results. Our team is developing a biosensor for waste pollution, giving the community real time access to data on the health of the canal. Additionally we have mined the canal for extremophiles with interesting properties.

What's In Brooklyn's Gowanus Canal? Used with permission from Hakai Magazine

Accomplishments

The Genspace 2015 iGEM Team has fulfilled all Bronze, Silver and Gold Medal Criteria

Requirements for a Bronze Medal:

✔ Registered the team, had a great summer, and will have fun at the Giant Jamboree.

✔ Successfully completed and submitted the iGEM 2015 Judging form.

✔ Created and shared a Description of the team's project using the iGEM wiki, and documented the team's parts using the Registry of Standard Biological Parts.

✔ Will present a Poster and Talk at the iGEM Jamboree.

✔ Created a page on our team wiki with clear attribution of each aspect of our project. See https://2015.igem.org/Team:Genspace/Attributions

✔ Interacted with our community by creating several engaging activities showcasing iGEM, synthetic biology and community labs, including public engagement at the New York Hall of Science and a presentation/public discussion with members of the Gowanus Canal Conservancy. See https://2015.igem.org/Team:Genspace/Practices

Additional Requirements for a Silver Medal:

✔ Helped a registered iGEM team from another institution in a significant way by characterizing an mCherry-based reporter system for the UGA-Georgia team. We also helped several other teams (University of Michigan, Paris-Bettencourt, Cooper Union and Columbia University) in different ways. See https://2015.igem.org/Team:Genspace/Collaborations

✔ Demonstrated a functional prototype of our project. We tested a prototype biosensor for human waste (submitted Part:BBa_K1799019). We showed this system works under real-world conditions simulated in the lab by addition of HSL to the cultures. See: https://2015.igem.org/Team:Genspace/Design

✔ iGEM projects involve important questions beyond the bench, for example relating to (but not limited to) ethics, sustainability, social justice, safety, security, and intellectual property rights. Our team identified, investigated and addressed the unique security issues presented by deploying a biosensor along a public waterway in the city that experienced the 911 attacks. See https://2015.igem.org/Team:Genspace/Practices

Additional Requirements for a Gold Medal:

✔ We expanded on our silver medal Human Practices activity by integrating the investigated issues into the design and/or execution of your project. See  https://2015.igem.org/Team:Genspace/Practices

✔ We have documented a new standard BioBrick Device central to our project and submitted this part to the iGEM Registry.We have also documented a new application of a BioBrick part from a previous iGEM year, since the Device was made up of two parts previously submitted to the Registry. We have added that documentation to the parts’ main pages. See https://2015.igem.org/Team:Genspace/Parts

Part Numbers:Part:BBa_K1799019, Part:BBa_C0062, Part:BBa_I732005

✔ We improved a part submitted by a previous year iGEM team. The pLsrA promoter Part:BBa_K117002  submitted in 2008 by team NTU-Singapore was reported not to work by the Tokyo Tech team in 2011, and the DNA was reported to not be what was documented in the registry. We synthesized the corrected part, added it to registry as Part Bba_K1799000 , and showed that it works, documenting this in the registry pages of both BBa_K117002 and Bba_K1799000. See https://2015.igem.org/Team:Genspace/Parts

Part Numbers:Bba_K1799000, BBa_K117002

✔ We have experimentally validated that two BioBrick Parts of our own design and construction work as expected. We have documented the characterization of these parts in the Main Page section of the Registry entry for that Part/Device. These working parts are different from the part documented in Gold medal criterion #2.

See https://2015.igem.org/Team:Genspace/Parts

Part Numbers:Part:BBa_K1799000, Part:BBa_K1799002

Sponsors

A very special thanks to:

  • Dr. Tom Knight

  • Mr. and Mrs. Giddins

  • Rachel Young

Place sticky footer content here.