Difference between revisions of "Team:Vanderbilt/Parts/Repair Enzymes"

 
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             <a href="https://2015.igem.org/Team:Vanderbilt/Parts/Part_Collection" class="btn btn-default">Part Collection</a>
 
             <a href="https://2015.igem.org/Team:Vanderbilt/Parts/Part_Collection" class="btn btn-default">Part Collection</a>
 
             <a href="https://2015.igem.org/Team:Vanderbilt/Parts/Optimized_RFPs" class="btn btn-default">Optimized RFPs</a>
 
             <a href="https://2015.igem.org/Team:Vanderbilt/Parts/Optimized_RFPs" class="btn btn-default">Optimized RFPs</a>
             <a href="https://2015.igem.org/Team:Vanderbilt/Parts/Visualizing_Evolution" class="btn btn-default">Visualizing Evolution</a>
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             <a href="https://2015.igem.org/Team:Vanderbilt/Parts/Stable_Circuits" class="btn btn-default">Stable Circuits</a>
 
             <a href="https://2015.igem.org/Team:Vanderbilt/Parts/Repair_Enzymes" class="btn btn-default chosen">Repair Enzymes</a>
 
             <a href="https://2015.igem.org/Team:Vanderbilt/Parts/Repair_Enzymes" class="btn btn-default chosen">Repair Enzymes</a>
 
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<h2>Repair Enzymes</h2>
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<p> To build our genetically-engineered strain of bacteria with decreased susceptibility to mutation, we produced several parts for expression DNA repair enzymes. Each of these genes were themselves optimized by our software to have a minimal number of overall mutation hotspots. Included are enzymes for repairing UV-induced lesions, oxidative damage, and the enzymes necessary to construct our "incorruptible cell".  Part numbers and their corresponding genes for each are listed below:</p><br>
  
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  <p>K1673201 T4 Pyrimidine Dimer Glycosylase (Mutation Optimized)
 
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   <p>K1673202 Formamidopyrimidine DNA glycosylase (Mutation Optimized)
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   <p>K1673203 S1 Nuclease (Overall Mutation Optimized)
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   <p>K1673204 T7 Endonuclase (Mutation Optimized)
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   <p>K1673205 T7 Endonuclease (Homology Optimized )
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   <p>K1673213 IPTG Promoter Mutation Optimized S1 Nuclease
 
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   <p>K1673214 IPTG Promoter Mutation Optimized T7 Endonuclease
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   <p>K1673223 T7 Promoter Mutation Optimized S1 Nuclease
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   <img src="https://static.igem.org/mediawiki/2015/d/d1/Vanderbilt_2015_dna_strand_2.png"/>
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<!-- footer -->
 
<div class="row" style="margin:0; border: 0; width: 100%;">
 
  <div class="col-lg-2" style="height:100%">
 
    <h3><font color="#7e1d2e">Team</font></h3>
 
    <a href="https://2015.igem.org/Team:Vanderbilt/Team/About"><font color="#9e515e">About</font></a>
 
    <br>
 
    <a href="https://2015.igem.org/Team:Vanderbilt/Team/Members"><font color="#9e515e">Members</font></a>
 
    <br>
 
    <a href="https://2015.igem.org/Team:Vanderbilt/Team/Attributes"><font color="#9e515e">Attributes</font></a>
 
    <br>
 
    <a href="https://2015.igem.org/Team:Vanderbilt/Team/Sponsors"><font color="#9e515e">Sponsors</font></a>
 
    <br>
 
  </div>
 
  <div class="col-lg-2" style="height:100%">
 
    <h3><font color="#7e1d2e">Project</font></h3>
 
    <a href="https://2015.igem.org/Team:Vanderbilt/Project/Background"><font color="#9e515e">Background</font></a>
 
    <br>
 
    <a href="https://2015.igem.org/Team:Vanderbilt/Project/Sequence"><font color="#9e515e">Sequence</font></a>
 
    <br>
 
    <a href="https://2015.igem.org/Team:Vanderbilt/Project/Circuit"><font color="#9e515e">Circuit</font></a>
 
    <br>
 
    <a href="https://2015.igem.org/Team:Vanderbilt/Project/Organism"><font color="#9e515e">Organism</font></a>
 
    <br>
 
    <a href="https://2015.igem.org/Team:Vanderbilt/Project/Nanopore"><font color="#9e515e">Nanopore</font></a>
 
    <br>
 
    <a href="https://2015.igem.org/Team:Vanderbilt/Project/Achievements"><font color="#9e515e">Achievements</font></a>
 
    <br>
 
  </div>
 
  <div class="col-lg-2" style="height:100%">
 
    <h3><font color="#7e1d2e">Parts</font></h3>
 
 
    <a href="https://2015.igem.org/Team:Vanderbilt/Parts/Part_Collection"><font color="#9e515e">Part Collection</font></a>
 
    <br>
 
    <a href="https://2015.igem.org/Team:Vanderbilt/Parts/Optimized_RFPs"><font color="#9e515e">Optimized RFPs</font></a>
 
    <br>
 
    <a href="https://2015.igem.org/Team:Vanderbilt/Parts/Visualizing_Evolution"><font color="#9e515e">Visualizing Evolution</font></a>
 
    <br>
 
    <a href="https://2015.igem.org/Team:Vanderbilt/Parts/Repair Enzymes"><font color="#9e515e">Repair Enzymes</font></a>
 
    <br>
 
  </div>
 
  <div class="col-lg-2" style="height:100%">
 
    <h3><font color="#7e1d2e">Notebook</font></h3>
 
    <a href="https://2015.igem.org/Team:Vanderbilt/Notebook/May"><font color="#9e515e">May</font></a>
 
    <br>
 
    <a href="https://2015.igem.org/Team:Vanderbilt/Notebook/June"><font color="#9e515e">June</font></a>
 
    <br>
 
    <a href="https://2015.igem.org/Team:Vanderbilt/Notebook/July"><font color="#9e515e">July</font></a>
 
    <br>
 
    <a href="https://2015.igem.org/Team:Vanderbilt/Notebook/August"><font color="#9e515e">August</font></a>
 
    <br>
 
    <a href="https://2015.igem.org/Team:Vanderbilt/Notebook/September"><font color="#9e515e">September</font></a>
 
    <br>
 
  </div>
 
  <div class="col-lg-2" style="height:100%">
 
    <h3><font color="#7e1d2e">Practices</font></h3>
 
    <a href="https://2015.igem.org/Team:Vanderbilt/Practices/Safety"><font color="#9e515e">Safety</font></a>
 
    <br>
 
    <a href="https://2015.igem.org/Team:Vanderbilt/Practices/Collaborations"><font color="#9e515e">Collaborations</font></a>
 
    <br>
 
    <a href="https://2015.igem.org/Team:Vanderbilt/Practices/Real_World_Applications"><font color="#9e515e">Applications</font></a>
 
    <br>
 
    <a href="https://2015.igem.org/Team:Vanderbilt/Practices/Interlab"><font color="#9e515e">Interlab</font></a>
 
    <br>
 
  </div>
 
  <div class="col-lg-2" style="height:100%">
 
    <h3><font color="#7e1d2e">Software</font></h3>
 
    <a href="https://2015.igem.org/Team:Vanderbilt/Software/Development"><font color="#9e515e">Development</font></a>
 
    <br>
 
    <a href="https://2015.igem.org/Team:Vanderbilt/Software/User_Guide"><font color="#9e515e">User Guide</font></a>
 
    <br>
 
    <a href="https://2015.igem.org/Team:Vanderbilt/Software/Stats"><font color="#9e515e">Statistics</font></a>
 
    <br>
 
  </div>
 
 
</div>
 
</div>
  <br>
 
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Latest revision as of 05:39, 21 November 2015

Vanderbilt iGEM 2015

Repair Enzymes

To build our genetically-engineered strain of bacteria with decreased susceptibility to mutation, we produced several parts for expression DNA repair enzymes. Each of these genes were themselves optimized by our software to have a minimal number of overall mutation hotspots. Included are enzymes for repairing UV-induced lesions, oxidative damage, and the enzymes necessary to construct our "incorruptible cell". Part numbers and their corresponding genes for each are listed below:


K1673201 T4 Pyrimidine Dimer Glycosylase (Mutation Optimized)

K1673202 Formamidopyrimidine DNA glycosylase (Mutation Optimized)

K1673203 S1 Nuclease (Overall Mutation Optimized)

K1673204 T7 Endonuclase (Mutation Optimized)

K1673205 T7 Endonuclease (Homology Optimized )

K1673213 IPTG Promoter Mutation Optimized S1 Nuclease

K1673214 IPTG Promoter Mutation Optimized T7 Endonuclease

K1673223 T7 Promoter Mutation Optimized S1 Nuclease

K1673224 T7 Promoter Mutation Optimized T7 Nuclease