Difference between revisions of "Team:Vanderbilt/Team/Attributions"
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| − | <div class="col-md-10 col-md-offset-1 | + | <div class="col-md-10 col-md-offset-1"> |
| − | < | + | <h2>Attributions</h2> |
| − | <p>While Vanderbilt University's iGEM team is driven by its undergraduates, our work is indebted to the generosity of our mentors and gracious sponsors. Vanderbilt iGEM prides itself in being a team run by undergraduates, for undergraduates. All project design and data analysis, lab work and experimentation, fundraising and outreach, and all the other work done by the team was all preformed by undergraduate student volunteers. However outside companies, faculty and staff, institutions, and individuals all have made contributions that have been essential in our team's growth and success. We would like to take the time to specially thank each one of them in the space below. </p> | + | <p>While Vanderbilt University's iGEM team is driven by its undergraduates, our work is indebted to the generosity of our mentors and gracious sponsors. Vanderbilt iGEM prides itself in being a team run by undergraduates, for undergraduates. All project design and data analysis, lab work and experimentation, fundraising and outreach, and all the other work done by the team was all preformed by undergraduate student volunteers. However outside companies, faculty and staff, institutions, and individuals all have made contributions that have been essential in our team's growth and success. We would like to take the time to specially thank each one of them in the space below.</p> |
| − | <h2> Faculty Support </h2> | + | <div class="row"> |
| − | <p> | + | <div class="col-md-6"> |
| − | < | + | <h2> Faculty Support </h2> |
| − | </p> | + | <p> |
| − | <p> | + | <strong>Dr. Kathy Friedman </strong> for serving as our team's primary faculty adviser, and always being available to discuss project ideas and to help troubleshoot our protocols. |
| − | < | + | </p> |
| − | </p> | + | <p> |
| − | <p> | + | <strong>Dr. Chrissy Morasco</strong> for assisting with the administrative responsibilities of the team and giving us opportunities to brainstorm ideas and collaborate with other students during our research. |
| − | < | + | </p> |
| − | </p> | + | <p> |
| − | <p> | + | <strong>Dr. Ian Macara</strong> for providing both laboratory spaces that our lab used over the year, along with allowing us access to equipment |
| − | < | + | </p> |
| − | </p> | + | <p> |
| − | + | <strong>Dr. Ethan Lee</strong> for hosting our research space next to his lab and providing equipment | |
| − | <h2> Support From Other Researchers </h2> | + | </p> |
| − | <p> | + | </div> |
| − | < | + | <div class="col-md-6"> |
| − | </p> | + | <h2> Support From Other Researchers </h2> |
| − | <p> | + | <p> |
| − | < | + | <strong>Sam Budoff </strong> for teaching our lab how to use the Nanopore next-generation DNA sequencer and providing us with the equipment necessary to run samples on the Nanopore |
| − | + | </p> | |
| − | + | <p> | |
| − | + | <strong>Anthony Tharp</strong> for giving our team access to the equipment core | |
| − | </p> | + | </p> |
| − | <p> | + | <p> |
| − | < | + | <strong>Macara Lab Members</strong> for welcoming the team and sharing their equipment with us |
| − | </p> | + | </p> |
| − | <h2> Project Attributions </h2> | + | </div> |
| − | + | </div> | |
| − | <p>We are proud to be able to say that all of our lab work was conducted by undergraduate team members, and that virtually all of our ideas originated from students on our team. The specific contributions of each member is broken down below: | + | |
| − | <h4> Software and Modeling </h4> | + | <h2>Project Attributions</h2> |
| − | <p>Designing mutation hotspot minimization and compiling parameters- JS | + | <p>We are proud to be able to say that all of our lab work was conducted by undergraduate team members, and that virtually all of our ideas originated from students on our team. The specific contributions of each member is broken down below:</p> |
| − | </p><p>Writing sequence-optimization software- JS | + | |
| − | </p><p>Writing the GUI for the bioinformatic software- DM | + | <p><i>AH= Anna Hwang, DM= Danny McClanahan, DS= Daniel Shaykevich, JS=Jarrod Shilts, KF= Kathy Friedman, O2= Ophir Ospovat, SL= Stephen Lee, SR= Sikandar Raza, WC= Will Cox</i></p> |
| − | </p><p>Optimizing and improving the efficiency of the software- DM | + | |
| − | </p><p>Collecting data from the Registry of Parts and compiling statistics- DM | + | <div class="row"> |
| − | </p><p>Designing mathematical modeling projects- WC, JS, O2 | + | <div class="col-md-6"> |
| − | </p><p>Writing code for mathematical models- WC | + | <h4> Software and Modeling </h4> |
| − | </p><p>Generating graphs for mathematical models- WC</p> | + | <p>Designing mutation hotspot minimization and compiling parameters- JS |
| − | <h4> Sequence Optimization Experiments </h4> | + | </p><p>Writing sequence-optimization software- JS |
| − | <p> Designing DNA damage quantification assays- JS | + | </p><p>Writing the GUI for the bioinformatic software- DM |
| − | </p><p> Cloning sequence-optimized RFP genes- JS, SR, O2 | + | </p><p>Optimizing and improving the efficiency of the software- DM |
| − | </p><p> Running alkaline gel electrophoresis assays- JS, O2 | + | </p><p>Collecting data from the Registry of Parts and compiling statistics- DM |
| − | </p><p> Running oxidative damage supercoiling assays- JS, SR | + | </p><p>Designing mathematical modeling projects- WC, JS, O2 |
| − | </p><p>Generating graphs and compiling statistics- JS </p> | + | </p><p>Writing code for mathematical models- WC |
| − | <h4> Circuit Optimization Experiments </h4> | + | </p><p>Generating graphs for mathematical models- WC</p> |
| − | <p> Designing parts for improving gene circuit stability- JS, O2 | + | </div> |
| − | </p><p> Writing software for minimizing sequence homology- JS | + | <div class="col-md-6"> |
| − | </p><p> Cloning circuit part genes- JS, SR, SL, O2, DS | + | <h4> Sequence Optimization Experiments </h4> |
| − | </p><p> Designing yeast homologous recombination experiment- KF, JS, O2, SL | + | <p> Designing DNA damage quantification assays- JS |
| − | </p><p> Cloning yeast homologous recombination genes- SL, JS | + | </p><p> Cloning sequence-optimized RFP genes- JS, SR, O2 |
| − | </p><p> Assembling vectors for VERT system -JS </p> | + | </p><p> Running alkaline gel electrophoresis assays- JS, O2 |
| − | <h4> Organism Optimization Experiments </h4> | + | </p><p> Running oxidative damage supercoiling assays- JS, SR |
| − | <p> Designing cell culture assays- JS, O2 | + | </p><p>Generating graphs and compiling statistics- JS </p> |
| − | </p><p> Measuring experimental cell cultures- JS, SL | + | </div></div> |
| − | </p><p> Designing "Incorruptable cell" - JS | + | <div class="row"> |
| − | </p><p> Cloning exogenous repair endonucleases- JS, SR, O2, SL, DS</p> | + | <div class="col-md-6"> |
| − | <h4> Other Experiments </h4> | + | <h4> Circuit Optimization Experiments </h4> |
| − | <p> Nanopore experiments - SL, JS | + | <p> Designing parts for improving gene circuit stability- JS, O2 |
| − | </p><p> Interlab study- JS | + | </p><p> Writing software for minimizing sequence homology- JS |
| − | </p><p> UGA Collaboration - JS | + | </p><p> Cloning circuit part genes- JS, SR, SL, O2, DS |
| − | </p><p> Preparing Competent Cells - JS, O2, DS, SL | + | </p><p> Designing yeast homologous recombination experiment- KF, JS, O2, SL |
| − | </p><p> Preparing plates, autoclaving, and other lab tasks - JS, SL, DS, O2, SR | + | </p><p> Cloning yeast homologous recombination genes- SL, JS |
| − | <h4> Policy and Practices </h4> | + | </p><p> Assembling vectors for VERT system -JS </p> |
| − | <p> Bioethics outreach- JS, SL, O2 | + | </div> |
| − | </p><p> Industry outreach- O2 | + | <div class="col-md-6"> |
| − | </p><p> High-school outreach- O2, SL | + | <h4> Organism Optimization Experiments </h4> |
| − | </p><p> Undergraduate synthetic biology course- JS,O2 | + | <p> Designing cell culture assays- JS, O2 |
| − | </p><p> Mutation survey and statistics- JS</p> | + | </p><p> Measuring experimental cell cultures- JS, SL |
| − | <h4> Project Wiki </h4> | + | </p><p> Designing "Incorruptable cell" - JS |
| − | <p> Designing wiki layout- O2, AH, JS, SL | + | </p><p> Cloning exogenous repair endonucleases- JS, SR, O2, SL, DS</p> |
| − | </p><p> Drawing wiki layout and logos - AH | + | </div></div> |
| − | </p><p> Formatting wiki pages - AH | + | <div class="row"> |
| − | </p><p> Writing "Team" section- JS, O2, SL | + | <div class="col-md-6"> |
| − | </p><p> Writing "Project" sections-JS, O2, SL | + | <h4> Other Experiments </h4> |
| − | </p><p> Writing "Practices" section-JS | + | <p> Nanopore experiments - SL, JS |
| − | </p><p> Writing "Software" section-DM | + | </p><p> Interlab study- JS |
| − | </p><p> Writing "Modeling" section-WC | + | </p><p> UGA Collaboration - JS |
| − | </p><p> General wiki editing- AH, JS, SR, SL, DM, DS, WC | + | </p><p> Preparing Competent Cells - JS, O2, DS, SL |
| − | <h4> Other Tasks </h4> | + | </p><p> Preparing plates, autoclaving, and other lab tasks - JS, SL, DS, O2, SR |
| − | <p> Fundraising- O2, SL, JS, SR | + | </div> |
| − | </p><p> Making project poster-JS | + | <div class="col-md-6"> |
| − | </p><p> Making project presentation-JS, O2, SL, SR, DM, WC, DS | + | <h4> Policy and Practices </h4> |
| − | </p | + | <p> Bioethics outreach- JS, SL, O2 |
| − | + | </p><p> Industry outreach- O2 | |
| + | </p><p> High-school outreach- O2, SL | ||
| + | </p><p> Undergraduate synthetic biology course- JS,O2 | ||
| + | </p><p> Mutation survey and statistics- JS</p> | ||
| + | </div> | ||
| + | </div> | ||
| + | <div class="row"> | ||
| + | <div class="col-md-6 col"> | ||
| + | <h4> Project Wiki </h4> | ||
| + | <p> Designing wiki layout- O2, AH, JS, SL | ||
| + | </p><p> Drawing wiki layout and logos - AH | ||
| + | </p><p> Formatting wiki pages - AH | ||
| + | </p><p> Writing "Team" section- JS, O2, SL | ||
| + | </p><p> Writing "Project" sections-JS, O2, SL | ||
| + | </p><p> Writing "Practices" section-JS | ||
| + | </p><p> Writing "Software" section-DM | ||
| + | </p><p> Writing "Modeling" section-WC | ||
| + | </p><p> General wiki editing- AH, JS, SR, SL, DM, DS, WC</p> | ||
| + | </div> | ||
| + | <div class="col-md-6"> | ||
| + | <h4> Other Tasks </h4> | ||
| + | <p> Fundraising- O2, SL, JS, SR | ||
| + | </p><p> Making project poster-JS | ||
| + | </p><p> Making project presentation-JS, O2, SL, SR, DM, WC, DS</p> | ||
| + | </div> | ||
</div> | </div> | ||
| + | </div> | ||
| + | </div> | ||
</div> | </div> | ||
Latest revision as of 06:00, 21 November 2015
Attributions
While Vanderbilt University's iGEM team is driven by its undergraduates, our work is indebted to the generosity of our mentors and gracious sponsors. Vanderbilt iGEM prides itself in being a team run by undergraduates, for undergraduates. All project design and data analysis, lab work and experimentation, fundraising and outreach, and all the other work done by the team was all preformed by undergraduate student volunteers. However outside companies, faculty and staff, institutions, and individuals all have made contributions that have been essential in our team's growth and success. We would like to take the time to specially thank each one of them in the space below.
Faculty Support
Dr. Kathy Friedman for serving as our team's primary faculty adviser, and always being available to discuss project ideas and to help troubleshoot our protocols.
Dr. Chrissy Morasco for assisting with the administrative responsibilities of the team and giving us opportunities to brainstorm ideas and collaborate with other students during our research.
Dr. Ian Macara for providing both laboratory spaces that our lab used over the year, along with allowing us access to equipment
Dr. Ethan Lee for hosting our research space next to his lab and providing equipment
Support From Other Researchers
Sam Budoff for teaching our lab how to use the Nanopore next-generation DNA sequencer and providing us with the equipment necessary to run samples on the Nanopore
Anthony Tharp for giving our team access to the equipment core
Macara Lab Members for welcoming the team and sharing their equipment with us
Project Attributions
We are proud to be able to say that all of our lab work was conducted by undergraduate team members, and that virtually all of our ideas originated from students on our team. The specific contributions of each member is broken down below:
AH= Anna Hwang, DM= Danny McClanahan, DS= Daniel Shaykevich, JS=Jarrod Shilts, KF= Kathy Friedman, O2= Ophir Ospovat, SL= Stephen Lee, SR= Sikandar Raza, WC= Will Cox
Software and Modeling
Designing mutation hotspot minimization and compiling parameters- JS
Writing sequence-optimization software- JS
Writing the GUI for the bioinformatic software- DM
Optimizing and improving the efficiency of the software- DM
Collecting data from the Registry of Parts and compiling statistics- DM
Designing mathematical modeling projects- WC, JS, O2
Writing code for mathematical models- WC
Generating graphs for mathematical models- WC
Sequence Optimization Experiments
Designing DNA damage quantification assays- JS
Cloning sequence-optimized RFP genes- JS, SR, O2
Running alkaline gel electrophoresis assays- JS, O2
Running oxidative damage supercoiling assays- JS, SR
Generating graphs and compiling statistics- JS
Circuit Optimization Experiments
Designing parts for improving gene circuit stability- JS, O2
Writing software for minimizing sequence homology- JS
Cloning circuit part genes- JS, SR, SL, O2, DS
Designing yeast homologous recombination experiment- KF, JS, O2, SL
Cloning yeast homologous recombination genes- SL, JS
Assembling vectors for VERT system -JS
Organism Optimization Experiments
Designing cell culture assays- JS, O2
Measuring experimental cell cultures- JS, SL
Designing "Incorruptable cell" - JS
Cloning exogenous repair endonucleases- JS, SR, O2, SL, DS
Other Experiments
Nanopore experiments - SL, JS
Interlab study- JS
UGA Collaboration - JS
Preparing Competent Cells - JS, O2, DS, SL
Preparing plates, autoclaving, and other lab tasks - JS, SL, DS, O2, SR
Policy and Practices
Bioethics outreach- JS, SL, O2
Industry outreach- O2
High-school outreach- O2, SL
Undergraduate synthetic biology course- JS,O2
Mutation survey and statistics- JS
Project Wiki
Designing wiki layout- O2, AH, JS, SL
Drawing wiki layout and logos - AH
Formatting wiki pages - AH
Writing "Team" section- JS, O2, SL
Writing "Project" sections-JS, O2, SL
Writing "Practices" section-JS
Writing "Software" section-DM
Writing "Modeling" section-WC
General wiki editing- AH, JS, SR, SL, DM, DS, WC
Other Tasks
Fundraising- O2, SL, JS, SR
Making project poster-JS
Making project presentation-JS, O2, SL, SR, DM, WC, DS