|
|
(28 intermediate revisions by 3 users not shown) |
Line 16: |
Line 16: |
| <a>Project</a> | | <a>Project</a> |
| <ul class="sub-nav"> | | <ul class="sub-nav"> |
− | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/projectoverview">Overview</a></li> | + | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/Description">Overview</a></li> |
| <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/projectBP">Benzo[A]Pyrene</a></li> | | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/projectBP">Benzo[A]Pyrene</a></li> |
− | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/projectcopper">Copper</a></li>
| |
| <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/projectcadmium">Cadmium</a></li> | | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/projectcadmium">Cadmium</a></li> |
− | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/projectmercury">Mercury</a></li>
| |
| <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/projectlead">Lead</a></li> | | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/projectlead">Lead</a></li> |
| <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/projectafla">Aflatoxin</a></li> | | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/projectafla">Aflatoxin</a></li> |
| </ul> | | </ul> |
| </li> | | </li> |
| + | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/Design">Product</a></li> |
| + | <li class="list-item has-sub-nav"> |
| + | <a>Parts</a> |
| + | <ul class="sub-nav"> |
| + | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/Parts">Parts</a></li> |
| + | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/Basic_Part">Basic Part</a></li> |
| + | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/Composite_Part">Composite Part</a></li> |
| + | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/Part_Collection">Part Collection</a></li> |
| + | </ul> |
| + | </li> |
| + | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/labnotes">Notebook</a></li> |
| <li class="list-item has-sub-nav"> | | <li class="list-item has-sub-nav"> |
| <a>Human Practice</a> | | <a>Human Practice</a> |
| <ul class="sub-nav"> | | <ul class="sub-nav"> |
− | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/hp/overview">Overview</a></li> | + | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/Practices">Overview</a></li> |
| <li class="list-item has-sub-nav"> | | <li class="list-item has-sub-nav"> |
| <a>Organization</a> | | <a>Organization</a> |
Line 39: |
Line 48: |
| <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/hp/education/elementary">Elementary</a></li> | | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/hp/education/elementary">Elementary</a></li> |
| <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/hp/education/kindergarten">Kindergarten</a></li> | | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/hp/education/kindergarten">Kindergarten</a></li> |
| + | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/hp/education/teacher">Teacher</a></li> |
| </ul> | | </ul> |
| </li> | | </li> |
Line 49: |
Line 59: |
| </li> | | </li> |
| <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/hp/ngo">NGO</a></li> | | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/hp/ngo">NGO</a></li> |
− | <li class="list-item has-sub-nav"> | + | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/hp/industry/vendors">Industry</a></li> |
− | <a>Industry</a>
| + | |
− | <ul class="sub-nav small-nav">
| + | |
− | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/hp/industry/fc">Food Companies</a></li>
| + | |
− | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/hp/industry/bc">Biotech Companies</a></li>
| + | |
− | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/hp/industry/vendors">Vendors</a></li>
| + | |
− | </ul>
| + | |
− | </li>
| + | |
| </ul> | | </ul> |
| </li> | | </li> |
Line 76: |
Line 79: |
| </ul> | | </ul> |
| </li> | | </li> |
| + | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/hp/community">Community</a></li> |
| + | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/hp/lawyer">Lawyer</a></li> |
| </ul> | | </ul> |
| </li> | | </li> |
− | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/labnotes">Notebook</a></li>
| |
− | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/parts">Parts</a></li>
| |
| <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/achievement">Achievement</a></li> | | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/achievement">Achievement</a></li> |
− | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/product">Product</a></li>
| |
| <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/Team/members">Team</a></li> | | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/Team/members">Team</a></li> |
| + | <li class="list-item"><a href="https://2015.igem.org/Team:HSNU-TAIPEI/Attributions">Attributions</a></li> |
| </ul> | | </ul> |
| </nav> | | </nav> |
Line 127: |
Line 130: |
| <p class="article-p">We mainly divide the whole experiment into 2 major parts.</p> | | <p class="article-p">We mainly divide the whole experiment into 2 major parts.</p> |
| <div class="article-img"><img src="https://static.igem.org/mediawiki/2015/5/5c/2015hsnu-Lead_1.png"></div> | | <div class="article-img"><img src="https://static.igem.org/mediawiki/2015/5/5c/2015hsnu-Lead_1.png"></div> |
− | <p class="article-p">The former fragment can consistently produce PbRr.[4]</p>
| + | <p class="article-p">▲Fig1-1:Circuit design of detecting Lead ion.</p> |
− | <div class="article-img"><img src="https://static.igem.org/mediawiki/2015/6/69/2015hsnu-Lead_2.png"></div>
| + | <p class="article-p">The former fragment can consistently produce PbRr.[4]</p> |
− | <p class="article-p">If the oil contains lead ions, they can integrate with proteins PbRr to further activate proteins.</p> | + | <div class="article-img"><img src="https://static.igem.org/mediawiki/2015/6/69/2015hsnu-Lead_2.png"></div> |
− | <div class="article-img"><img src="https://static.igem.org/mediawiki/2015/8/8b/2015hsnu-Lead_3.png"></div>
| + | <p class="article-p">▲Fig1-2:Circuit design of detecting Lead ion.</p> |
− | <p class="article-p">As for the later fragment, the lead promoter can be controlled by activated protein PbRr to further trigger the GFP.</p>
| + | <p class="article-p">If the oil contains lead ions, they can integrate with proteins PbRr to further activate proteins.</p> |
| + | <div class="article-img"><img src="https://static.igem.org/mediawiki/2015/8/8b/2015hsnu-Lead_3.png"></div> |
| + | <p class="article-p">▲Fig1-3:Circuit design of detecting Lead ion.</p> |
| + | <p class="article-p">As for the later fragment, the lead promoter can be controlled by activated protein PbRr to further trigger the GFP.</p> |
| </article> | | </article> |
| <article class="article"> | | <article class="article"> |
| <h3 class="article-title">Result</h3> | | <h3 class="article-title">Result</h3> |
− | <ol class="article-ol"> | + | <ul class="article-ul"> |
| <li> | | <li> |
| <span>Whether lead can enter e.coli or not</span> | | <span>Whether lead can enter e.coli or not</span> |
| <ol class="article-ol" type="A"> | | <ol class="article-ol" type="A"> |
− | <li><span>Method</span></li> | + | <li><span>Method</span> |
| + | <h4 class="article-h4">Detection of the amount of toxins in the e.coli.</h4> |
| + | <ol class="article-ol" type="I"> |
| + | <li>Add 100μl of DH5α and 900μl of LB broth into the tube and incubate for 1hr.</li> |
| + | <li>Centrifuge at 4000rpm for 3min and clicard 800μl of the supernatant</li> |
| + | <li> |
| + | <p class="article-p">Plate each 100μl of the bacteria onto the dishes and spread.</p> |
| + | <p class="article-p">Incubate the plates at 37℃ overnight</p> |
| + | </li> |
| + | <li> |
| + | <p class="article-p">Prepare each concentration of the toxin.</p> |
| + | <p class="article-p">Statutory standards *100 / *10 / *1 / *0.1 / *0.01</p> |
| + | </li> |
| + | </ol> |
| + | <h4 class="article-h4">Next day</h4> |
| + | <ol class="article-ol" type="I"> |
| + | <li> |
| + | <p class="article-p">Prepare 16 microcentrifuge tubes.(5 kinds of concentration *3 timings+control)</p> |
| + | <p class="article-p">Add 500μl of DH5α to each tube.</p> |
| + | <p class="article-p">Centrifuge all tubes at 4000rpm for 3min.</p> |
| + | <p class="article-p">Remove the supernatent.</p> |
| + | </li> |
| + | <li> |
| + | <p class="article-p">Add 1000μl of the toxic solution each time.</p> |
| + | <p class="article-p">Follow the concentration and 3 timings(0.5hr / 1hr / 1.5hr).</p> |
| + | </li> |
| + | <li> |
| + | <ol class="article-ol" type="i"> |
| + | <li>Add 0.5cc of ddH<sub>2</sub>O and mix with the bacterias</li> |
| + | <li>Centrifuge at 13000rpm for 30 sec</li> |
| + | <li>Remove the water</li> |
| + | <li>Repeat step1~step3 for three times</li> |
| + | </ol> |
| + | </li> |
| + | <li> |
| + | <p class="article-p">Add 1cc of ddH<sub>2</sub>O and mix with the bacterias</p> |
| + | <p class="article-p">Centrifuge at 13000rpm for 30sec.</p> |
| + | <p class="article-p">Remove 700μl of the supernatant</p> |
| + | </li> |
| + | <li> |
| + | <p class="article-p">Kill the bacteria:</p> |
| + | <ol class="article-ol" type="i"> |
| + | <li>Put all the tubes in the Liquid nitrogen</li> |
| + | <li>When they freeze,heat them at 100℃</li> |
| + | <li>Repeat step1~step2 for 3 times</li> |
| + | </ol> |
| + | </li> |
| + | </ol> |
| + | |
| + | </li> |
| <li><span>Result</span></li> | | <li><span>Result</span></li> |
− | <li><span>Discussion</span></li>
| + | |
| + | <div class="section-note"> |
| + | <p class="note-caption">We put all the result into fluorescent reader.</p> |
| + | <p class="note-caption">By using gold nanoparticles(AU-NPs), we measured the lead absorption of e.coli. The higher fluorescence intensity it shows, the less lead enters e.coli.</p> |
| + | <img src="https://static.igem.org/mediawiki/2015/5/59/HSNU-TAIPEI-LEAD-result1.jpg"> |
| + | <p class="article-p">▲Fig.2:The Pb absorption of E.coli in 1 ppm Pb<sup>2+</sup> in different timings.</p> |
| + | <p class="note-caption">With this figure, we can know that the longer e.coli put in 1 ppm Pb<sup>2+</sup> , the more lead entered the e.coli.</p> |
| + | <img src="https://static.igem.org/mediawiki/2015/4/4a/HSNU-TAIPEI-LEAD-result2.jpg"> |
| + | <p class="article-p">▲Fig.3:The Pb absorption of E.coli in 0.1 ppm Pb<sup>2+</sup> in different timings.</p> |
| + | <p class="note-caption">With this figure, we can know that the longer e.coli put in 0.1 ppm Pb<sup>2+</sup> , the more lead entered the e.coli.</p> |
| + | <img src="https://static.igem.org/mediawiki/2015/4/40/HSNU-TAIPEI-LEAD-result3.jpg"> |
| + | <p class="article-p">▲Fig.4: The Pb absorption of E.coli in 0.01 ppm Pb<sup>2+</sup> in different timings.</p> |
| + | <p class="note-caption">With this figure, we can know that the longer e.coli put in 0.01 ppm Pb<sup>2+</sup> , the more lead entered the e.coli.</p> |
| + | <img src="https://static.igem.org/mediawiki/2015/f/f2/HSNU-TAIPEI-LEAD-result4.jpg"> |
| + | <p class="article-p">▲Fig.5: The Pb absorption of E.coli in 0.001 ppm Pb<sup>2+</sup> in different timings.</p> |
| + | <p class="note-caption">With this figure, we can know that the longer e.coli put in 0.001 ppm Pb<sup>2+</sup> , the more lead entered the e.coli.</p> |
| + | <img src="https://static.igem.org/mediawiki/2015/f/fc/HSNU-TAIPEI-LEAD-result5.jpg"> |
| + | <p class="article-p">▲Fig:6: The Pb absorption of E.coli in 0.0001 ppm Pb<sup>2+</sup> in different timings.</p> |
| + | <p class="note-caption">With this figure, we can know that the longer e.coli put in 0.0001 ppm Pb<sup>2+</sup> , the more lead entered the e.coli</p> |
| + | <img src="https://static.igem.org/mediawiki/2015/0/0c/HSNU-TAIPEI-LEAD-result6.jpg"> |
| + | <p class="article-p">▲Fig.7: The Pb absorption of E.coli in 0.5hr in different Pb<sup>2+</sup> concentration.</p> |
| + | <p class="note-caption">With this figure, we can know that the higher Pb<sup>2+</sup> concentration in 0.5 hr, the more lead entered the e.coli.</p> |
| + | <img src="https://static.igem.org/mediawiki/2015/d/de/HSNU-TAIPEI-LEAD-result7.jpg"> |
| + | <p class="article-p">▲Fig.8: The Pb absorption of E.coli in 1hr in different Pb<sup>2+</sup> concentration.</p> |
| + | <p class="note-caption">With this figure, we can know that the higher Pb<sup>2+</sup> concentration in 1 hr, the more lead entered the e.coli.</p> |
| + | <img src="https://static.igem.org/mediawiki/2015/2/2e/HSNU-TAIPEI-LEAD-result8.jpg"> |
| + | <p class="article-p">▲Fig.9: The Pb absorption of E.coli in 1.5hr in different Pb<sup>2</sup> concentration.</p> |
| + | <p class="note-caption">With this figure, we can know that the higher Pb<sup>2+</sup> concentration in 1.5 hr, the more lead entered the e.coli.</p> |
| + | <img src="https://static.igem.org/mediawiki/2015/c/c6/HSNU-TAIPEI-LEAD-result-9.jpg" width="60%"> |
| + | <p class="article-p">▲Fig.10: Checking-measuring curve of Pb.</p> |
| + | <p class="note-caption">With this figure,we can know Pb concentration is in the solution.</p> |
| + | </div> |
| + | </li> |
| </ol> | | </ol> |
| </li> | | </li> |
− | <li>
| + | |
− | <span>Whether e.coli is alive in the poisons, condition or not</span>
| + | <ul> |
− | <ol class="article-ol" type="A">
| + | |
− | <li><span>Method</span></li>
| + | |
− | <li><span>Results</span></li>
| + | |
− | <li><span>Discussion</span></li>
| + | |
− | </ol>
| + | |
− | </li>
| + | |
− | <li>
| + | |
− | <span>The relation between the concentration of lead and illumination of RFP</span>
| + | |
− | <ol class="article-ol" type="A">
| + | |
− | <li><span>Method</span></li>
| + | |
− | <li><span>Results</span></li>
| + | |
− | <li><span>Discussion</span></li>
| + | |
− | </ol>
| + | |
− | </li>
| + | |
− | <ol> | + | |
| </article> | | </article> |
| <article class="article"> | | <article class="article"> |
Line 167: |
Line 239: |
| <li>[1] Rancidity of Used Cooking Oil and Heavy Metal Analyses on Selected Street-Vended Foods (Annabelle A. Callano, 2012)</li> | | <li>[1] Rancidity of Used Cooking Oil and Heavy Metal Analyses on Selected Street-Vended Foods (Annabelle A. Callano, 2012)</li> |
| <li><a href="http://www.lenntech.com/periodic/elements/pb.htm">[2] Health effects of lead</a></li> | | <li><a href="http://www.lenntech.com/periodic/elements/pb.htm">[2] Health effects of lead</a></li> |
− | <li>[3] 食用油脂類衛生標準,食品衛生管理法第十七條</li> | + | <li>[3] Edible Fat and Oil Sanitary Standards Article 17</li> |
| <li>[4] An Exceptionally Selective Lead(ii)-Regulatory Protein from Ralstonia Metallidurans: Development of a Fluorescent Lead(ii) Probe (Peng Chen, Bill Greenberg, Safiyh Taghavi, Christine Romano, Daniel van der Lelie, and Chuan He)</li> | | <li>[4] An Exceptionally Selective Lead(ii)-Regulatory Protein from Ralstonia Metallidurans: Development of a Fluorescent Lead(ii) Probe (Peng Chen, Bill Greenberg, Safiyh Taghavi, Christine Romano, Daniel van der Lelie, and Chuan He)</li> |
| </ul> | | </ul> |
| </article> | | </article> |
| </div> | | </div> |
| + | <div class="link-figure"><img src="https://static.igem.org/mediawiki/2015/0/05/HSNUTAIPEIPROJECT.png"> |
| + | <ul> |
| + | <li><a href="https://2015.igem.org/Team:HSNU-TAIPEI/projectBP">Benzo[A]Pyrene</a></li> |
| + | <li><a href="https://2015.igem.org/Team:HSNU-TAIPEI/projectcopper">Copper</a></li> |
| + | <li><a href="https://2015.igem.org/Team:HSNU-TAIPEI/projectcadmium">Cadmium</a></li> |
| + | <li><a href="https://2015.igem.org/Team:HSNU-TAIPEI/projectmercury">Mercury</a></li> |
| + | <li><a href="https://2015.igem.org/Team:HSNU-TAIPEI/projectlead">Lead</a></li> |
| + | <li><a href="https://2015.igem.org/Team:HSNU-TAIPEI/projectafla">Aflatoxin</a></li> |
| + | </ul> |
| + | </div> |
| + | <div class="side-nav"> |
| + | <h4>Project</h4> |
| + | <ul> |
| + | <li><a href="https://2015.igem.org/Team:HSNU-TAIPEI/Description">Overview</a></li> |
| + | <li><a href="https://2015.igem.org/Team:HSNU-TAIPEI/projectBP">Benzo[A]Pyrene</a></li> |
| + | <li><a href="https://2015.igem.org/Team:HSNU-TAIPEI/projectcopper">Copper</a></li> |
| + | <li><a href="https://2015.igem.org/Team:HSNU-TAIPEI/projectcadmium">Cadmium</a></li> |
| + | <li><a href="https://2015.igem.org/Team:HSNU-TAIPEI/projectmercury">Mercury</a></li> |
| + | <li><a href="https://2015.igem.org/Team:HSNU-TAIPEI/projectlead">Lead</a></li> |
| + | <li><a href="https://2015.igem.org/Team:HSNU-TAIPEI/projectafla">Aflatoxin</a></li> |
| + | </ul> |
| + | </div> |
| | | |
| </div> | | </div> |
Line 178: |
Line 272: |
| <footer> | | <footer> |
| <div class="footer-cell"> | | <div class="footer-cell"> |
| + | <div class="six-img"> |
| + | <img src="https://static.igem.org/mediawiki/2015/f/f8/HSNU-TAIPEI_cooperation_1.gif"> |
| + | <img src="https://static.igem.org/mediawiki/2015/3/37/HSNU-TAIPEI_cooperation_2.png"> |
| + | <img src="https://static.igem.org/mediawiki/2015/0/02/HSNU-TAIPEI_cooperation_3.png"> |
| + | <img src="https://static.igem.org/mediawiki/2015/9/92/HSNU-TAIPEI_cooperation_4.png"> |
| + | <img src="https://static.igem.org/mediawiki/2015/e/e8/HSNU-TAIPEI_cooperation_5.png"> |
| + | <img src="https://static.igem.org/mediawiki/2015/6/60/HSNU-TAIPEI_cooperation_6.png"> |
| + | <img src="https://static.igem.org/mediawiki/2015/9/9a/HSNU-TAIPEI_attributions_1.gif"> |
| + | </div> |
| <p><a href="http://www.hs.ntnu.edu.tw">HSNU | Taipei</a></p> | | <p><a href="http://www.hs.ntnu.edu.tw">HSNU | Taipei</a></p> |
| </div> | | </div> |