Difference between revisions of "Team:CHINA CD UESTC/Collaborations"

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In 2015 iGEM，we UESTC teams helped SCU_China to finish the prediction and experimental demonstration about RBS in their project.</p>
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2015年，我们与SCU_China, UESTC-software等队伍深入交流，实现了资源共享，团结协作，形成了很好的合作互助氛围。并且成功的帮助SCU_China完成其项目中关于核糖体结合位点（RBS）的预测及实验论证的工作。
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<h4>First about the prediction</h4>
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<strong>CHINA_CD_UESTC offered technology and method.</strong> The software team UESTC_Software program and finish the software. The two teams from UESTC helped SCU_China to create a software named <a href="http://cefg.cn/Igem2015/mccap-server/app/tools/sdFinder.php">SD Finder</a> in helping user predict the ORF and SD sequence of DNA sequence. <br><br><br>
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<p>在这过程中我们队伍进行了两方面的工作:</p>
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</p><h4>After finishing the prediction</h4>
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<p>We CHINA_CD_UESTC helped SCU_China to <strong>design the experiment and finish the demonstration. </strong>In order to find the unknown RBS position and standard it , we designed this experiment.</p>
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<h5>（1）帮助SCD_China设计实验，完成RBS预测结果的实验论证。</h5>
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<h5>（2）给UESTC-software 开发SD Finder软件提供了核糖体结合位点（RBS）预测的理论支持。</h5>
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<h2>帮助SCU_China设计实验</h2>
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我们为四川大学iGEM队伍设计了实验，完成RBS预测结果的实验论证。为实现找到未知的RBS位点、并将其标准化的目标。我们为四川大学设计了以下实验：
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<p id="pic_title">1、nifD基因前RBS的验证</p>
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<p id="pic_title">2、nifD基因前RBS的突变验证</p>
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<p id="pic_title">3、nifK基因前RBS的验证</p>
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<p id="pic_title">4、nifK基因前RBS的突变验证</p>
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<p>CHINA_CD_UESTC最终设计并完成了这些实验，很好的帮助SCU_China实现了RBS预测及标准化的工作。</p>
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<h2>SD Finder理论支持</h2>
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UESTC-software为四川大学开发的核糖体结合位点（RBS）的预测软件，SD Finder，是在我们的理论知识支持下开发的。我们两支队伍的成员很好的弥补了双方在理论和软件技术的不足，协作完成了SD Finder，用于in helping user predict the ORF and SD sequence of DNA sequence.软件链接如下：
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<a href="http://cefg.cn/Igem2015/mccap-server/app/tools/sdFinder.php">
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<p>http://cefg.cn/Igem2015/mccap-server/app/tools/sdFinder.php</p>
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<h2>1. Demonstration of RBS located in nifD up stream</h2>
 
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<h2>2. Mutant demonstration of RBS located in nifD up stream</h2>
 
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Revision as of 11:48, 8 September 2015

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COLLABORATIONS

  This year the collaboration of our team with SCU_China team and UESTC-software team was very smoothly as expected. We helped each other from the aspects of experimental design, experiment results verification and software to reach the iGEM spirit as resource sharing. The following is a detailed description.

2015年，我们与SCU_China, UESTC-software等队伍深入交流，实现了资源共享，团结协作，形成了很好的合作互助氛围。并且成功的帮助SCU_China完成其项目中关于核糖体结合位点（RBS）的预测及实验论证的工作。

在这过程中我们队伍进行了两方面的工作:

  • （1）帮助SCD_China设计实验，完成RBS预测结果的实验论证。
  • （2）给UESTC-software 开发SD Finder软件提供了核糖体结合位点（RBS）预测的理论支持。

帮助SCU_China设计实验

我们为四川大学iGEM队伍设计了实验，完成RBS预测结果的实验论证。为实现找到未知的RBS位点、并将其标准化的目标。我们为四川大学设计了以下实验：

1、nifD基因前RBS的验证

2、nifD基因前RBS的突变验证

3、nifK基因前RBS的验证

4、nifK基因前RBS的突变验证

CHINA_CD_UESTC最终设计并完成了这些实验，很好的帮助SCU_China实现了RBS预测及标准化的工作。

SD Finder理论支持

UESTC-software为四川大学开发的核糖体结合位点（RBS）的预测软件，SD Finder，是在我们的理论知识支持下开发的。我们两支队伍的成员很好的弥补了双方在理论和软件技术的不足，协作完成了SD Finder，用于in helping user predict the ORF and SD sequence of DNA sequence.软件链接如下：

http://cefg.cn/Igem2015/mccap-server/app/tools/sdFinder.php