Difference between revisions of "Team:Kent/Experiments"

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solution becomes clear. <i>Do not allow the lysis reaction to proceed for
 
solution becomes clear. <i>Do not allow the lysis reaction to proceed for
 
more than 5 min. If using LyseBlue reagent, the solution will turn blue. </i></li>
 
more than 5 min. If using LyseBlue reagent, the solution will turn blue. </i></li>
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       <li> </li>
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       <li>Add 350 μl Buffer N3 and mix immediately and thoroughly by inverting the tube 4–6
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       <li> </li>
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times. </li>
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       <li> </li>
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       <li>Centrifuge for 10 min at 13,000 rpm (~17,900 x g) in a table-top microcentrifuge.  </li>
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       <li> </li>
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       <li>Apply 800 μl supernatant from step 5 to the QIAprep 2.0 spin column by pipetting.  Centrifuge for
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       <li> </li>
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30–60 s and discard the flow-through. </li>
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       <li> </li>
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       <li>Wash the QIAprep 2.0 spin column by adding 0.5 ml Buffer PB. Centrifuge for 30–60 s and discard the flow-through. </li>
−
       <li> </li>
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       <li>Wash the QIAprep 2.0 spin column by adding 0.75 ml Buffer PE. Centrifuge for
 +
30–60 s and discard the flow-through </li>
 +
       <li>Centrifuge for 1 min to remove residual wash buffer.  </li>
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       <li>Place the QIAprep 2.0 column in a clean 1.5 ml microcentrifuge tube. To elute DNA,
 +
add 50 μl Buffer EB (10 mM TrisCl, pH 8.5) to the center of the QIAprep 2.0
 +
spin column, let stand for 1 min, and centrifuge for 1 min.  </li>
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      <li>Add 1 volume of Loading Dye to 5
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volumes of purified DNA. Mix the solution by pipetting up and down before loading the
 +
gel. </li>
 +
 
 
  </ol>
 
  </ol>
 
</p>
 
</p>

Revision as of 11:42, 30 June 2015


iGEM Kent 2015

Experiments & Protocols

Contents

Competent Cells
Transformation Protocol
Miniprep

Competent Cells
Overview
Materials
Procedure
References
Transformation Protocol
Overview
Materials
Procedure
References
Miniprep
Overview

  • The Miniprep is for purification of molecular biology grade plasmid DNA
  • This provides a rapid method to purify plasmid DNA using silica membrane column

    • Materials
    Procedure

  • Add the provided RNase A solution to Buffer P1.
  • Mix the solution and store at 2–8°C
  • Add ethanol (96–100%) to Buffer PE before use
    1. Pellet 1–5 ml bacterial overnight culture by centrifugation at >8000 rpm (6800 x g) for 3 min at room temperature (15–25°C).
    2. Resuspend pelleted bacterial cells in 250 μl Buffer P1 and transfer it to a microcentrifuge tube.
    3. Add 250 μl Buffer P2 and mix thoroughly by inverting the tube 4–6 times until the solution becomes clear. Do not allow the lysis reaction to proceed for more than 5 min. If using LyseBlue reagent, the solution will turn blue.
    4. Add 350 μl Buffer N3 and mix immediately and thoroughly by inverting the tube 4–6 times.
    5. Centrifuge for 10 min at 13,000 rpm (~17,900 x g) in a table-top microcentrifuge.
    6. Apply 800 μl supernatant from step 5 to the QIAprep 2.0 spin column by pipetting. Centrifuge for 30–60 s and discard the flow-through.
    7. Wash the QIAprep 2.0 spin column by adding 0.5 ml Buffer PB. Centrifuge for 30–60 s and discard the flow-through.
    8. Wash the QIAprep 2.0 spin column by adding 0.75 ml Buffer PE. Centrifuge for 30–60 s and discard the flow-through
    9. Centrifuge for 1 min to remove residual wash buffer.
    10. Place the QIAprep 2.0 column in a clean 1.5 ml microcentrifuge tube. To elute DNA, add 50 μl Buffer EB (10 mM TrisCl, pH 8.5) to the center of the QIAprep 2.0 spin column, let stand for 1 min, and centrifuge for 1 min.
    11. Add 1 volume of Loading Dye to 5 volumes of purified DNA. Mix the solution by pipetting up and down before loading the gel.

    References