Difference between revisions of "Team:Valencia UPV/Achievements"
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+ | <p style="font-weight:bold>A biological circuit design that acts as an eukaryotic decoder able to produce 2N outputs. | ||
− | + | Results: Circuit</p> | |
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− | <p>An in silico approach of the biological decoder that has allowed a wide understanding of the key control elements for a proper functioning. Results: Modeling</p> | + | <ul><li>Genetically controlled by applying only two different light wavelengths inputs</li> |
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− | + | <li>Capable to process the information remotely according to people specific needs.</li> | |
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+ | <li>Able to ‘remember’ the sequential light inputs given in order to obtain the desired product.</li> | ||
+ | |||
+ | </ul> | ||
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+ | <p style="font-weight:bold>An in silico approach of the biological decoder that has allowed a wide understanding of the | ||
+ | |||
+ | key control elements for a proper functioning. Results: Modeling</p> | ||
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+ | <ul><li>Identifying principal or key components which may be critical in order to get the desired response of our device: | ||
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+ | fast enough recombinases, good light sensing of optogenetically controlled switches, </li> | ||
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+ | <li>Exploring conditions to improve the performance of our circuit, reducing the time needed to majorly produce the | ||
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+ | desired output: different number of gene copies or sequences of light inputs.</li> | ||
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+ | <li>Obtaining optimal conditions that ensure the highest production of the chosen output as fast as possible with the | ||
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+ | minimum waste of resources, obtaining the best light inputs.</li> | ||
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+ | </ul> | ||
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+ | <p style="font-weight:bold>A Red/Far Red light-inducible switch implementation in <i>N. benthamiana</i> plants to induce | ||
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+ | the expression of the firefly luciferase gene. Results: Red/Far red light switch</p> | ||
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+ | <ul><li>Successful assembly by adapting the main control element genes (PIF6 and PhyB) to different DNA-binding domains: | ||
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+ | LexABD, LacIBD and Gal4BD</li> | ||
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+ | <li>Testing the functionality of this system by transforming plant leaves prior to measure expression levels of the | ||
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+ | firefly luciferase gene.</li> | ||
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+ | <li>Showing promising results in leaf tissues for future gene stable expression.</li> | ||
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+ | </ul> | ||
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+ | <p style="font-weight:bold>A blue light dependant gene expression system, which has been transiently implemented in <i>N. | ||
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+ | benthamiana</i> leaf tissues for the production of a gene of interest. Results: Blue light switch</p> | ||
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+ | <ul><li>Successful assembly of the complete switch device with three different DNA binding domains. </li> | ||
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+ | <li>Exploring its functionality in plant leaves by measure the expression of the luciferase protein</li> | ||
+ | |||
+ | </ul> | ||
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+ | <p style="font-weight:bold>A de novo design of a violet/cyan light-dependent toggle switch for expression of a target gene | ||
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+ | in plants.</p> | ||
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+ | <ul><li>Designing and successfully assembling all the components for the correct interaction of the key elements upon | ||
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+ | light stimuli.</li> | ||
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+ | <li>Checking its expression in plant protoplasts by reversing its photoswitchable property.</li> | ||
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+ | <li>Transforming the toggle switch into plant leaves to test the functionality for luciferase transgene expression.</li> | ||
+ | |||
+ | </ul> | ||
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+ | <p style="font-weight:bold>A plant codon usage optimization for BxbI and PhiC31 recombinases and its expression in plants | ||
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+ | for GFP visualization</p> | ||
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+ | <ul><li>Designing reporter elements for each recombinase that contain a terminator T35S flanked by the recognition | ||
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+ | sites</li> | ||
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+ | <li>Assembling the reporter element with a GFP gene as a reporter</li> | ||
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+ | <li>Successfully expression and functionality of the device for each recombinase in plant leaves.</li> | ||
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+ | </ul> | ||
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+ | <p style="font-weight:bold>A plant capable to express three different medicaments. Results: Drugs</p> | ||
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+ | <ul><li>Succesful assembly of each drug with a constitutive plant promoter (P35S). </li> | ||
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+ | <li>Proof of our produced medicaments in plant leaves.</li> | ||
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+ | </ul> | ||
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+ | <p style="font-weight:bold>Seedlings assays to prove the capacity of certain plant species to be transformed for gene | ||
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+ | expression.</p> | ||
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+ | <p style="font-weight:bold>Designed and implemented a portable bioreactor that contains the necessary elements and where | ||
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+ | all the process of transformation and product selection happens. Magic lamp</p> | ||
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+ | <p style="font-weight:bold>Created a virtual laboratory called Synbiocraft , where anyone just with a computer game can | ||
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+ | feel the real experience of working in a lab without expending huge amounts of money. There you will be able to recreate | ||
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+ | any project ever performed.</p> | ||
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</section> | </section> | ||
</div> | </div> |
Revision as of 18:27, 18 September 2015
An in silico approach of the biological decoder that has allowed a wide understanding of the
key control elements for a proper functioning. Results: Modeling A blue light dependant gene expression system, which has been transiently implemented in N.
benthamiana leaf tissues for the production of a gene of interest. Results: Blue light switch A plant codon usage optimization for BxbI and PhiC31 recombinases and its expression in plants
for GFP visualization Seedlings assays to prove the capacity of certain plant species to be transformed for gene
expression. Created a virtual laboratory called Synbiocraft , where anyone just with a computer game can
feel the real experience of working in a lab without expending huge amounts of money. There you will be able to recreate
any project ever performed.Medals
Achievements
Future perspectives