Difference between revisions of "Team:Bordeaux/Practices"
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<p align="justify"> During the first meeting on the 17th of December, we created the group ImagineLife composed by iGEM team members and other people interested by sciences. We taklked about how we can explain synthetic biology to non-scientific people. After a long discussion, we were agreed to do a survey about synthetic biology to find out: </p> | <p align="justify"> During the first meeting on the 17th of December, we created the group ImagineLife composed by iGEM team members and other people interested by sciences. We taklked about how we can explain synthetic biology to non-scientific people. After a long discussion, we were agreed to do a survey about synthetic biology to find out: </p> | ||
− | <p> | + | <p> ✵ What people already know / don't know about this field </p> |
− | <p> | + | <p> ✵ What what scares them </p> |
− | <p> | + | <p> ✵ What they believe synthetic biology can do for them </p> |
<p align="justify"> <b>With the results of this survey, we hoped to have a better overview of the situation and be able to explain synthetic biology in simple terms to the general public.</b> </p> | <p align="justify"> <b>With the results of this survey, we hoped to have a better overview of the situation and be able to explain synthetic biology in simple terms to the general public.</b> </p> | ||
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<p align="justify" style="text-indent: 3vw;"> Synthetic biology is a new field of research in biology which <b>mixes science and engineering</b>. It focuses on the conception and the construction of new reliable functions through the creation of biological systems or the re-engineering of organisms which already exist. The singularity of synthetic biology compared to traditional biology is about engineering live beings to have a <b>predictable behavior</b>. In order to do so, scientists focus on optimizing existing biosynthetic pathways or creating new ones while bypassing or suppressing inefficient pathways in order to increase productivity. | <p align="justify" style="text-indent: 3vw;"> Synthetic biology is a new field of research in biology which <b>mixes science and engineering</b>. It focuses on the conception and the construction of new reliable functions through the creation of biological systems or the re-engineering of organisms which already exist. The singularity of synthetic biology compared to traditional biology is about engineering live beings to have a <b>predictable behavior</b>. In order to do so, scientists focus on optimizing existing biosynthetic pathways or creating new ones while bypassing or suppressing inefficient pathways in order to increase productivity. | ||
<br>Three different approaches exist in synthetic biology: | <br>Three different approaches exist in synthetic biology: | ||
− | <p align="justify" style="line-height: 105%"> | + | <p align="justify" style="line-height: 105%"> ✵ The metabolic engineering of the living beings by using <b>biobricks</b> (DNA sequences whose functions and assembly conditions are known). The biobricks are free of access on the WEB and can be synthesized on request. </p> |
− | <p align="justify" style="line-height: 105%"> | + | <p align="justify" style="line-height: 105%"> ✵ The production of <b>minimal genomes</b> and <b>simplified organisms</b> where new functions can be added to realize a task. This approach is often used for the optimization of existing processes. </p> |
− | <p align="justify" style="line-height: 105%"> | + | <p align="justify" style="line-height: 105%"> ✵ The synthesis of a <b>whole synthetic genome</b> that will be inserted in existing cell hosts or in synthetic cells. This field of synthetic biology may help scientists to understand how living organisms are created. </p> |
<p align="justify" style="text-indent: 3vw;"> The organisms which come from these approaches can be used in both <b>industrial applications</b> (for example to produce drugs, biofuels, biomass or biopesticides) and in <b>basic research</b> as tools like biosensors (<a href"https://2009.igem.org/Team:Cambridge"target="_blank"><b>E. chromi</b></a> - Team Cambridge, 2009) or against pollution (<a href"https://2013.igem.org/Team:TU-Munic"target="_blank"><b>Physco Filter</b></a> - Team TU-Munich, 2013). With these new tools emerging from synthetic biology, many possible fields conducting to different experiments in science permit the intellectual and technical expansion. <b>Bioethics</b> is necessary to prevent researcher about its <b>ethical limits</b>.</p> | <p align="justify" style="text-indent: 3vw;"> The organisms which come from these approaches can be used in both <b>industrial applications</b> (for example to produce drugs, biofuels, biomass or biopesticides) and in <b>basic research</b> as tools like biosensors (<a href"https://2009.igem.org/Team:Cambridge"target="_blank"><b>E. chromi</b></a> - Team Cambridge, 2009) or against pollution (<a href"https://2013.igem.org/Team:TU-Munic"target="_blank"><b>Physco Filter</b></a> - Team TU-Munich, 2013). With these new tools emerging from synthetic biology, many possible fields conducting to different experiments in science permit the intellectual and technical expansion. <b>Bioethics</b> is necessary to prevent researcher about its <b>ethical limits</b>.</p> | ||
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<p align="justify"> To avoid confusion about the terms "biosecurity", "biosafety" and "biohazard", some people gave a definition of each of these terms. </p> | <p align="justify"> To avoid confusion about the terms "biosecurity", "biosafety" and "biohazard", some people gave a definition of each of these terms. </p> | ||
− | <p align="justify" style="line-height: 105%"> | + | <p align="justify" style="line-height: 105%"> ✵ Biosafety describes principles, technologies and containment practices put in place to avoid accidents and unintentional exposure to pathogens and toxins. |
− | <p align="justify" style="line-height: 105%"> | + | <p align="justify" style="line-height: 105%"> ✵ Biosecurity describes the protection measures put in place and management of important biological materials in laboratories, in order to prevent them from being accessed without authorization. |
− | <p align="justify" style="line-height: 105%"> | + | <p align="justify" style="line-height: 105%"> ✵ Biohazard includes, in this case, both biosafety and biosecurity. |
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− | <p align="justify" style="line-height: 105%"> | + | <p align="justify" style="line-height: 105%"> ✵ We learned about acting in case of an accident, where to find emergency showers, fire extinguishers and emergency doors. |
− | <p align="justify" style="line-height: 105%"> | + | <p align="justify" style="line-height: 105%"> ✵ Some requirements were discussed as wearing gloves and lab coat for most procedures. In some cases, during the use of ethidium bromide, nitrile gloves are mandatory. Other experiments must be conducted with safety glasses. It is also recommended to wear clothes offering a minimum of protection. |
− | <p align="justify" style="line-height: 105%"> | + | <p align="justify" style="line-height: 105%"> ✵ We also learned about working with chemicals products and how to dispose of them. Most products used are classified as non-hazardous (even for the sulfation protocol). Chemical products are just irritants and so handle it with gloves. In the lab, there is a specific solvent cabinet for liquid wastes. |
− | <p align="justify" style="line-height: 105%"> | + | <p align="justify" style="line-height: 105%"> ✵ Moreover, all biological waste will be autoclaved before disposal. All work is done on benches or under open-front hoods. |
− | <p align="justify" style="line-height: 105%"> | + | <p align="justify" style="line-height: 105%"> ✵ We worked with non-toxic organisms as <i> Escherichia coli </i>(BL21) and <i> Saccharomyces cerevisiae </i>(Invsc1) but, all waste that has been in contact with bacteria was put to bacterial waste in aseptic conditions. |
Revision as of 23:03, 4 September 2015