Difference between revisions of "Team:SDU-Denmark/Tour31"
| Line 6: | Line 6: | ||
<p>We are using a Two-Hybrid system to screen for aptameres as an alternate to antibodies. It can be used for detecting protein-protein interactions, by measuring levels of cAMP. The way a two-hybrid system functions is: | <p>We are using a Two-Hybrid system to screen for aptameres as an alternate to antibodies. It can be used for detecting protein-protein interactions, by measuring levels of cAMP. The way a two-hybrid system functions is: | ||
| − | <a class="popupImg alignRight" style="width:150px" target="_blank" href="https://static.igem.org/mediawiki/2015/1/16/SDU2015_2-hybrid_screening.png" title=" | + | <a class="popupImg alignRight" style="width:150px" target="_blank" href="https://static.igem.org/mediawiki/2015/1/16/SDU2015_2-hybrid_screening.png" title="T18 and T25 contain coding sequences for the two catalytic subunits of adenylate cyclase"> |
<img src="https://static.igem.org/mediawiki/2015/1/16/SDU2015_2-hybrid_screening.png" style="width:200px"/> | <img src="https://static.igem.org/mediawiki/2015/1/16/SDU2015_2-hybrid_screening.png" style="width:200px"/> | ||
| − | + | The peptide aptamer binds to the target resulting in a position of the two subunits of adenylate cyclase, close enough for its catalytic activity to function. The result is a conversion of ATP into cAMP. | |
</a> | </a> | ||
Revision as of 21:51, 9 September 2015
Two-Hybrid Screening
We are using a Two-Hybrid system to screen for aptameres as an alternate to antibodies. It can be used for detecting protein-protein interactions, by measuring levels of cAMP. The way a two-hybrid system functions is:
The peptide aptamer binds to the target resulting in a position of the two subunits of adenylate cyclase, close enough for its catalytic activity to function. The result is a conversion of ATP into cAMP.
The subunits of the adenylate cyclase T18 and T25 functions only when close together. The linker ensures this. The cyclase is then able to convert ATP to cAMP.
Our system
In our Two-Hybrid screening system, the linker between T18 and T25 is; A scaffold protein, coupled to T18, with the aptamer in its active site and on T25 a small linker domain followed by the target protein. To detect an increase in cAMP levels, a MG1655:delta-CyA is used. Detection is insured by a PstA a cAMP-activated promotor. The product of transcription is RFP (red fluorescent protein) visible by the eye and with fluoresces. The stronger the interaction between aptamer and target, the stronger the fluorescent. Selection of high affinity aptameres is thereby enabled. (billed- screening system) After selection, the specific sequence for an aptamer + linker and scaffold is cut out and transferred, to a another plasmid containing intein, used for production. This colony has the …. system promoting secretion of our product. As part of the construct is the intein, which is self cleaving used for purification of product in an EBA.