Difference between revisions of "Team:HKUST-Rice/DIY gel imaging system"
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<div class= "project_superrow"> | <div class= "project_superrow"> | ||
| − | <div id= "page_title"><h1>DIY Gel Imaging | + | <div id= "page_title"><h1>DIY Gel Imaging Station</i></h1></div> |
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<h1>Why Gel imaging is important to synthetic biology? </h1> | <h1>Why Gel imaging is important to synthetic biology? </h1> | ||
| − | <p>Gel electrophoresis one of the most essential tool in biology, it is an essential part for restriction diagnostic test for nucleic acid, resolving PCR products, etc. Having a gel imaging tool in proximity can increase the productivity of the lab. In our case, since the closest gel imaging tools is far away from HKUST iGEM lab, we decided to build a | + | <p>Gel electrophoresis one of the most essential tool in biology, it is an essential part for restriction diagnostic test for nucleic acid, resolving PCR products, etc. Having a gel imaging tool in proximity can increase the productivity of the lab. In our case, since the closest gel imaging tools is far away from HKUST iGEM lab, we decided to build a gel imaging station for our own use, using simple and easy to get material. </p> |
<div class="project_image"> | <div class="project_image"> | ||
| − | <img src="https://static.igem.org/mediawiki/2015/b/be/HKUST-Rice15_Resultsbutton.png" alt="DIY Gel imaging | + | <img src="https://static.igem.org/mediawiki/2015/b/be/HKUST-Rice15_Resultsbutton.png" alt="DIY Gel imaging station"> |
</div> | </div> | ||
</div> | </div> | ||
<div class="project_row"> | <div class="project_row"> | ||
| − | <h1>Material for DIY Gel imaging | + | <h1>Material for DIY Gel imaging Station</h1> |
| − | <p>The DIY Gel imaging | + | <p>The DIY Gel imaging station mainly consist of five parts:</p> |
<ol> | <ol> | ||
<li>UV trans-illuminator </li> | <li>UV trans-illuminator </li> | ||
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<div class="project_image"> | <div class="project_image"> | ||
| − | <img src="https://static.igem.org/mediawiki/2015/b/be/HKUST-Rice15_Resultsbutton.png" alt="Parts of DIY Gel Imaging | + | <img src="https://static.igem.org/mediawiki/2015/b/be/HKUST-Rice15_Resultsbutton.png" alt="Parts of DIY Gel Imaging station "> |
</div> | </div> | ||
| − | <p>We got our <b>UV trans-illuminator</b> as a donation from the life science department in HKUST. We ordered the set of <b>color filters</b> for <b>XXX dollars</b> from Taobao, an online shopping website. We purchased <b>camera</b> from local hardware store for <b>XXX dollars</b>. We built the <b>case</b> using XXX material, with the help of XXX, for <b>XXX dollars</b>. We connect the camera to our lab computer through a XXX cable for live viewing of the gel using <b>digiCamControl software</b>, which is an open source software. The total cost of the DIY gel imaging | + | <p>We got our <b>UV trans-illuminator</b> as a donation from the life science department in HKUST. We ordered the set of <b>color filters</b> for <b>XXX dollars</b> from Taobao, an online shopping website. We purchased <b>camera</b> from local hardware store for <b>XXX dollars</b>. We built the <b>case</b> using XXX material, with the help of XXX, for <b>XXX dollars</b>. We connect the camera to our lab computer through a XXX cable for live viewing of the gel using <b>digiCamControl software</b>, which is an open source software. The total cost of the DIY gel imaging station is <b>XXX dollars.</b> </p> |
</div> | </div> | ||
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<h2>Prototype</h2> | <h2>Prototype</h2> | ||
| − | <p>Before we build the DIY Gel imaging | + | <p>Before we build the DIY Gel imaging station , we build a prototype to prove the feasibility of a DIY gel imaging station . Here is how we build this prototype:</p> |
<div class="project_image"> | <div class="project_image"> | ||
| − | <img src="https://static.igem.org/mediawiki/2015/b/be/HKUST-Rice15_Resultsbutton.png" alt="Parts of DIY Gel Imaging | + | <img src="https://static.igem.org/mediawiki/2015/b/be/HKUST-Rice15_Resultsbutton.png" alt="Parts of DIY Gel Imaging station "> |
</div> | </div> | ||
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</ol> | </ol> | ||
<div class="project_image"> | <div class="project_image"> | ||
| − | <img src="https://static.igem.org/mediawiki/2015/b/be/HKUST-Rice15_Resultsbutton.png" alt="Parts of DIY Gel Imaging | + | <img src="https://static.igem.org/mediawiki/2015/b/be/HKUST-Rice15_Resultsbutton.png" alt="Parts of DIY Gel Imaging Station "> |
</div> | </div> | ||
<h2>Working Model</h2> | <h2>Working Model</h2> | ||
| − | <p>After we confirm that we could take Gel photo using easy to get material, we proceed to build a case especially for this purpose. With the case, the imaging | + | <p>After we confirm that we could take Gel photo using easy to get material, we proceed to build a case especially for this purpose. With the case, the imaging station will be more durable.</p> |
<div class="project_image"> | <div class="project_image"> | ||
Revision as of 16:49, 15 September 2015
DIY Gel Imaging Station
Why Gel imaging is important to synthetic biology?
Gel electrophoresis one of the most essential tool in biology, it is an essential part for restriction diagnostic test for nucleic acid, resolving PCR products, etc. Having a gel imaging tool in proximity can increase the productivity of the lab. In our case, since the closest gel imaging tools is far away from HKUST iGEM lab, we decided to build a gel imaging station for our own use, using simple and easy to get material.
Material for DIY Gel imaging Station
The DIY Gel imaging station mainly consist of five parts:
- UV trans-illuminator
- Color filter
- Camera
- Case
- Computer with monitor for live viewing of Gel
We got our UV trans-illuminator as a donation from the life science department in HKUST. We ordered the set of color filters for XXX dollars from Taobao, an online shopping website. We purchased camera from local hardware store for XXX dollars. We built the case using XXX material, with the help of XXX, for XXX dollars. We connect the camera to our lab computer through a XXX cable for live viewing of the gel using digiCamControl software, which is an open source software. The total cost of the DIY gel imaging station is XXX dollars.
From Prototype to a Working Model
Prototype
Before we build the DIY Gel imaging station , we build a prototype to prove the feasibility of a DIY gel imaging station . Here is how we build this prototype:
- We obtained a plastic bucket and drilled a XXX inches hole on the bottom of it.
- We place a filter on top of the hole and put a camera on top of the filter.
- A electrophoresed agarose gel stained with Midori Green is placed on top of the UV trans-illuminator
- The entire bucket, with the filter and camera are placed on top of the UV trans-illuminator, and a photo was taken
Working Model
After we confirm that we could take Gel photo using easy to get material, we proceed to build a case especially for this purpose. With the case, the imaging station will be more durable.
