Difference between revisions of "Team:Northeastern Boston/Description"

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      the deadly pathogen and an estimated 11 thousand died. Meanwhile, a
 
      the deadly pathogen and an estimated 11 thousand died. Meanwhile, a
 
      potent anti-Ebola antibody cocktail, ZMapp, was going through preclinical
 
      potent anti-Ebola antibody cocktail, ZMapp, was going through preclinical
      studies. In a study where 18 heavily Ebola infected monkeys treated with
+
      studies. In a study where 18 heavily Ebola infected monkeys were treated with
 
      ZMapp, all 18 survived, including several in the hemorrhaging stage of
 
      ZMapp, all 18 survived, including several in the hemorrhaging stage of
 
      the disease. Given the timing and urgent need, ZMapp was approved for use
 
      the disease. Given the timing and urgent need, ZMapp was approved for use
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      to neutralize the virus (as illustrated by the Rhesus model). Only 7
 
      to neutralize the virus (as illustrated by the Rhesus model). Only 7
 
      doses were available throughout the Ebola Outbreak despite infection
 
      doses were available throughout the Ebola Outbreak despite infection
      rates in the thousands. Ultimately, it represents an absence in rapid antibody production capabilities.</p>
+
      rates in the thousands. Ultimately, it represents an absence of rapid antibody production capabilities.</p>
  
 
      <p>A proposed solution was the tobacco plant. A relatively
 
      <p>A proposed solution was the tobacco plant. A relatively
 
      well-understood and engineered organism, it was the method for making
 
      well-understood and engineered organism, it was the method for making
      ZMapp. Producers inject plant leaves with agrobacterium containing the
+
      ZMapp. Producers agrobacterium containing the
      DNA for the therapeutic antibody. The plants grow and the antibody is
+
      DNA for the therapeutic antibody into the plant leaves by vacuum infiltration. The plants grow and the antibody is
 
      purified from the plant cell lysate. In theory, this is a quick and
 
      purified from the plant cell lysate. In theory, this is a quick and
 
      inexpensive method for rapidly producing lots of antibody, dependent upon
 
      inexpensive method for rapidly producing lots of antibody, dependent upon
      arable land rather than high-sterility CHO vats. In practice, it is
+
      arable land rather than high-sterility CHO vats. [<a href="http://www.sciencedirect.com/science/article/pii/S0006291X03013354" target="_blank">2</a>] In practice, it is
 
      not.</p>
 
      not.</p>
 
    </div>
 
    </div>
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      of living organisms. [<a href=
 
      of living organisms. [<a href=
 
      "http://www.nature.com/nmat/journal/v8/n5/pdf/nmat2419.pdf" target=
 
      "http://www.nature.com/nmat/journal/v8/n5/pdf/nmat2419.pdf" target=
      "_blank">2,</a> <a href=
+
      "_blank">3,</a> <a href=
 
      "http://www.sciencedirect.com/science/article/pii/S1389172314001509"
 
      "http://www.sciencedirect.com/science/article/pii/S1389172314001509"
      target="_blank">3</a>]</p>
+
      target="_blank">4</a>]</p>
  
 
      <p>It might, alternatively, be possible to inject the mRNA of a desired
 
      <p>It might, alternatively, be possible to inject the mRNA of a desired
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      to the patient, has been extensively researched in the context of AIDS.
 
      to the patient, has been extensively researched in the context of AIDS.
 
      [<a href="http://www.ncbi.nlm.nih.gov/pubmed/8864752" target=
 
      [<a href="http://www.ncbi.nlm.nih.gov/pubmed/8864752" target=
      "_blank">4</a>, <a href="http://www.mdpi.com/1999-4915/6/2/428/html"
+
      "_blank">5</a>, <a href="http://www.mdpi.com/1999-4915/6/2/428/html"
      target="_blank">5</a>, <a href=
+
      target="_blank">6</a>, <a href=
 
      "http://www.nature.com/ni/journal/v14/n1/full/ni.2480.html" target=
 
      "http://www.nature.com/ni/journal/v14/n1/full/ni.2480.html" target=
      "_blank">6</a>]</p>
+
      "_blank">7</a>]</p>
  
 
      <p>In might be possible to design synthetic bacteria (like Synlogic) for
 
      <p>In might be possible to design synthetic bacteria (like Synlogic) for
 
      the gut that produce Nanobodies (small enough to be produced in bacteria
 
      the gut that produce Nanobodies (small enough to be produced in bacteria
      and lacking complex do-sulfide bonds). These pathogen targeting
+
      and lacking complex di-sulfide bonds). These pathogen targeting
 
      nanobodies might prove capable of reaching the circulatory system after
 
      nanobodies might prove capable of reaching the circulatory system after
 
      being turned on by an exogenous transcription factor, however, these
 
      being turned on by an exogenous transcription factor, however, these
 
      nanobodies might still face the complication of improper glycosylation
 
      nanobodies might still face the complication of improper glycosylation
 
      and immune clearance. [<a href=
 
      and immune clearance. [<a href=
      "http://europepmc.org/abstract/med/19876789" target="_blank">7</a>]</p>
+
      "http://europepmc.org/abstract/med/19876789" target="_blank">8</a>]</p>
  
 
<img src="https://static.igem.org/mediawiki/2015/b/b6/SelfreliantDelectableKouprey.gif" style="width:100%">
 
<img src="https://static.igem.org/mediawiki/2015/b/b6/SelfreliantDelectableKouprey.gif" style="width:100%">
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      Ebola Outbreak. So the question becomes: can microalgae produce properly
 
      Ebola Outbreak. So the question becomes: can microalgae produce properly
 
      folded antibodies at a high enough concentration and at a cheap enough
 
      folded antibodies at a high enough concentration and at a cheap enough
      cost to warrant their use as a widescale antibody production platform? We
+
      cost to warrant their use as a widescale antibody production platform? Given the need and potential benefits, we believe it warrants additional research.</p>
      believe it’s worth further investigation and will present the possible
+
      long-term implementation of microalgae production facilities.</p>
+
  
 
      </div>
 
      </div>
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      <div class="minimal-dropdown__content hidden">
 
      <div class="minimal-dropdown__content hidden">
 
      <p>Within each of us (health and medication depending) is an adaptive
 
      <p>Within each of us (health and medication depending) is an adaptive
      immune system. A major cell in this system is the B Cell. Immunocompetent
+
      immune system. A major cell in this system is the B Cell. An immunocompetent
      B cells are covered in B cell receptors (BCRs). These BCRs respond to
+
      B cell is covered in B cell receptors (BCRs). These BCRs respond to
 
      non-self antigens. When a foreign antigen binds to a BCR, it activates
 
      non-self antigens. When a foreign antigen binds to a BCR, it activates
      the B cell to turn into plasma B cells, dedicated producers of specific
+
      the B cell to turn into a plasma B cell, dedicated to producing specific
      antibodies against a portion of the antigen that triggered the
+
      antibodies against the antigen that triggered its
 
      response.</p>
 
      response.</p>
  
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      to pump out high levels of antibody into the bloodstream. [<a href=
 
      to pump out high levels of antibody into the bloodstream. [<a href=
 
      "https://www.rndsystems.com/research-area/b-cells" target=
 
      "https://www.rndsystems.com/research-area/b-cells" target=
      "_blank">7]</a></p>
+
      "_blank">9]</a></p>
  
 
<img src="https://static.igem.org/mediawiki/2015/e/e4/DecisiveMenacingEel.gif" style="width:100%">
 
<img src="https://static.igem.org/mediawiki/2015/e/e4/DecisiveMenacingEel.gif" style="width:100%">
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      emergence of a contagion to quarantine the sick and provide nourishment.
 
      emergence of a contagion to quarantine the sick and provide nourishment.
 
      They are not designed with the capability to rapidly adapt and attack the
 
      They are not designed with the capability to rapidly adapt and attack the
      pathogen. For good reason, drugs for human treatment undergo rigorous FDA
+
      pathogen. Drugs for human treatment undergo rigorous FDA
      review before approval. The average inception to market timeline for an
+
      review before approval; the average inception to market timeline for an
 
      FDA approved drug is 12 years (note: this is after the drug has been
 
      FDA approved drug is 12 years (note: this is after the drug has been
 
      developed). This is too long for rapid drug turnaround and represents a
 
      developed). This is too long for rapid drug turnaround and represents a
Line 247: Line 245:
  
 
      <p id="outbreakgifdesc"></p>A hypothetical map of distributed
 
      <p id="outbreakgifdesc"></p>A hypothetical map of distributed
      algae-antibody production facilities. Orange dots are locations of
+
      algae-antibody production facilities. Orange dots are
 
      existing facilities that could be repurposed. Yellow dots are
 
      existing facilities that could be repurposed. Yellow dots are
 
      hypothetical potential power plant algae hybrid facilities. They are
 
      hypothetical potential power plant algae hybrid facilities. They are
 
      smaller in scale but repurposable in a time of need. Green dots are
 
      smaller in scale but repurposable in a time of need. Green dots are
 
      potential large sized facilities. These too could produce commodity
 
      potential large sized facilities. These too could produce commodity
      goods, like food for livestock or subsidized biofuel, until needed
+
      goods, like food for livestock or subsidized biofuel, until needed for
      antibody.<br>
+
      antibody production.<br>
  
 
      <p></p>
 
      <p></p>

Revision as of 23:00, 18 September 2015

Overview

The Need

Some Solutions

A Green Safety Net

Cost/Benefit