Difference between revisions of "Team:Evry/Software/Pipeline"
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| − | < | + | <p class='lead'>A detailed report on the genomics pipeline we created (quality-control, differential expression analysis, data visualisation, variant discovery) can be found <a href="https://static.igem.org/mediawiki/2015/c/c4/Igem_pipeline_description.pdf" _target="_blank">here</a>. After the pipeline, we predict if the genes overexpressed in tumors and mutated can be good candidate antigen by predicting if the ywill be cleaved by the proteasome and what is their affinity with the CMH-I. </p> |
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Revision as of 03:55, 19 September 2015
Pipeline
A detailed report on the genomics pipeline we created (quality-control, differential expression analysis, data visualisation, variant discovery) can be found here. After the pipeline, we predict if the genes overexpressed in tumors and mutated can be good candidate antigen by predicting if the ywill be cleaved by the proteasome and what is their affinity with the CMH-I.
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