Difference between revisions of "Team:Aalto-Helsinki/Kinetics"

m (started to work with constant table)
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<h3>AtoB</h3>
 
<h3>AtoB</h3>
−
<h3>FadB2</h3>
 
−
<h3>Hdb</h3>
 
−
<h3>Crt</h3>
 
−
<h3>Ter</h3>
 
−
<h3>YciA</h3>
 
−
<h3>Car</h3>
 
−
<h3>Sfp</h3>
 
−
<h3>Ado</h3>
 
−
 
−
 
−
<h2>Constants</h2>
 
  
 
<table class="table table-bordered">
 
<table class="table table-bordered">
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       <td><p>Is there something special about this?</p></td>
 
       <td><p>Is there something special about this?</p></td>
 
     </tr>
 
     </tr>
 +
  </tbody>
 +
</table>
 +
 +
<h3>FadB2</h3>
 +
 +
<table class="table table-bordered">
 +
  <thead>
 +
    <tr>
 +
      <td><h3 style="margin-top:0;">Constant</h3></td>
 +
      <td><h3 style="margin-top:0;">Value</h3></td>
 +
      <td><h3 style="margin-top:0;">Source</h3></td>
 +
      <td><h3 style="margin-top:0;">To note</h3></td>
 +
    </tr>
 +
  </thead>
 +
  <tbody>
 
     <tr>
 
     <tr>
 
       <td><p>\( K_{cat}^{FadB2} \)</p></td>
 
       <td><p>\( K_{cat}^{FadB2} \)</p></td>
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       <td><p>Reverse reaction</p></td>
 
       <td><p>Reverse reaction</p></td>
 
     </tr>
 
     </tr>
 +
  </tbody>
 +
</table>
  
 +
<h3>Hdb</h3>
 +
<h3>Crt</h3>
 +
<h3>Ter</h3>
 +
<h3>YciA</h3>
 +
<h3>Car</h3>
 +
<h3>Sfp</h3>
 +
<h3>Ado</h3>
 +
 +
 +
<h2>Constants</h2>
 +
 +
<table class="table table-bordered">
 +
  <thead>
 +
    <tr>
 +
      <td><h3 style="margin-top:0;">Constant</h3></td>
 +
      <td><h3 style="margin-top:0;">Value</h3></td>
 +
      <td><h3 style="margin-top:0;">Source</h3></td>
 +
      <td><h3 style="margin-top:0;">To note</h3></td>
 +
    </tr>
 +
  </thead>
 +
  <tbody>
 +
    <tr>
 +
      <td><p>[Acetyl-CoA]</p></td>
 +
      <td><p>0.00061 mol/l</p></td>
 +
      <td><a><p>link</p></a></td>
 +
      <td><p>Is there something special about this?</p></td>
 +
    </tr>
 +
    <tr>
 +
      <td><p>[Acetoacetyl-CoA]</p></td>
 +
      <td><p>2.2e-05 mol/l</p></td>
 +
      <td><a><p>link</p></a></td>
 +
      <td><p>Is there something special about this?</p></td>
 +
    </tr>
 +
    <tr>
 +
      <td><p>[CoA]</p></td>
 +
      <td><p>0.00014 mol/l</p></td>
 +
      <td><a><p>link</p></a></td>
 +
      <td><p>Is there something special about this?</p></td>
 +
    </tr>
 +
    <tr>
 +
      <td><p>[NADPH]</p></td>
 +
      <td><p>00012 mol/l</p></td>
 +
      <td><a><p>link</p></a></td>
 +
      <td><p>Is there something special about this?</p></td>
 +
    </tr>
 +
    <tr>
 +
      <td><p>[NADP\( ^+\)]</p></td>
 +
      <td><p>2.1e-06 mol/l</p></td>
 +
      <td><a><p>link</p></a></td>
 +
      <td><p>Is there something special about this?</p></td>
 +
    </tr>
 +
    <tr>
 +
      <td><p>[NADH]</p></td>
 +
      <td><p>8.3e-05 mol/l</p></td>
 +
      <td><a><p>link</p></a></td>
 +
      <td><p>Is there something special about this?</p></td>
 +
    </tr>
 +
    <tr>
 +
      <td><p>[NAD\( ^+\)]</p></td>
 +
      <td><p>0.0026 mol/l</p></td>
 +
      <td><a><p>link</p></a></td>
 +
      <td><p>Is there something special about this?</p></td>
 +
    </tr>
 +
    <tr>
 +
      <td><p>[ATP]</p></td>
 +
      <td><p>0.0096 mol/l</p></td>
 +
      <td><a><p>link</p></a></td>
 +
      <td><p>Is there something special about this?</p></td>
 +
    </tr>
 +
    <tr>
 +
      <td><p>[AMP]</p></td>
 +
      <td><p>0.00028 mol/l</p></td>
 +
      <td><a><p>link</p></a></td>
 +
      <td><p>Is there something special about this?</p></td>
 +
    </tr>
 +
    <tr>
 +
      <td><p>[H\( _2\)O]</p></td>
 +
      <td><p>38.85 mol/l</p></td>
 +
      <td><a><p>link</p></a></td>
 +
      <td><p>Is there something special about this?</p></td>
 +
    </tr>
 
   </tbody>
 
   </tbody>
−
</table
+
</table>
  
  

Revision as of 13:37, 4 August 2015

Kinetics

General

AtoB

Constant

Value

Source

To note

\( K_{cat}^{AtoB} \)

0.001 jtn

link

Forward reaction

\( K_{M}^{AtoB:Acetyl\text{-}CoA} \)

0.001 jtn

link

Is there something special about this?

FadB2

Constant

Value

Source

To note

\( K_{cat}^{FadB2} \)

0.001 jtn

link

Forward reaction

\( K_{cat}^{FadB2} \)

0.001 jtn

link

Reverse reaction

\( K_{M}^{FadB2:Acetoacetyl\text{-}CoA} \)

0.001 jtn

link

Forward reaction

\( K_{cat}^{FadB2:NADPH} \)

0.001 jtn

link

Forward reaction

\( K_{cat}^{FadB2:3\text{-}Hydroxybutyryl\text{-}CoA} \)

0.001 jtn

link

Reverse reaction

\( K_{cat}^{FadB2:NADP^+} \)

0.001 jtn

link

Reverse reaction

Hdb

Crt

Ter

YciA

Car

Sfp

Ado

Constants

Constant

Value

Source

To note

[Acetyl-CoA]

0.00061 mol/l

link

Is there something special about this?

[Acetoacetyl-CoA]

2.2e-05 mol/l

link

Is there something special about this?

[CoA]

0.00014 mol/l

link

Is there something special about this?

[NADPH]

00012 mol/l

link

Is there something special about this?

[NADP\( ^+\)]

2.1e-06 mol/l

link

Is there something special about this?

[NADH]

8.3e-05 mol/l

link

Is there something special about this?

[NAD\( ^+\)]

0.0026 mol/l

link

Is there something special about this?

[ATP]

0.0096 mol/l

link

Is there something special about this?

[AMP]

0.00028 mol/l

link

Is there something special about this?

[H\( _2\)O]

38.85 mol/l

link

Is there something special about this?