Team:CityU HK/Notebook/Interlab study

Notebook - City University of Hong Kong 2015


Keys to the table:

-[?/?]: Names of restriction enzyme used for digestion:; E, EcoRI; X, XbaI; S, SpeI; P, PstI

-The host cells used for transformation were competent JM109 E. coli cells


Week 8 : July 6 – 10
Monday 6
  • Transformation of pSB1C3-BBa_J23101, pSB1C3-BBa_J23106 and pSB1C3-BBa_J23117, and pSB1A2-BBa_I13504 into competent E. coli cells
  • Tuesday 7
    Wednesday 8
  • Extraction of the plasmids pSB1C3-BBa_J23101, pSB1C3-BBa_J23106, pSB1C3-BBa_J23117 and pSB1A2-BBa_I13504 by mini-prep
  • Thursday 9
    Friday 10
    Week 9 : July 13 – 18
    Monday 13
  • Transformation of plasmid pSB1C3-BBa_I13504 into competent E. coli cells
  • Tuesday 14
  • Restriction digestion with [S/P] of the plasmid pSB1C3-BBa_J23101
  • Restriction digestion with [S/P] of the plasmid pSB1C3-BBa_J23106
  • Restriction digestion with [S/P] of the plasmid pSB1C3-BBa_J23117
  • Redo the transformation of plasmids pSB1C3-BBa_I20270 and pSB1C3-BBa_R0040
  • Wednesday 15
  • Extraction of plasmid pSB1C3-BBa_I13504
  • Restriction digestion with [X/P] of the plasmid pSB1C3-BBa_I13504
  • Thursday 16
  • Extraction of plasmids pSB1C3-BBa_I20270 and pSB1C3-BBa_R0040
  • Gel purification of the [X/P] digested I13504
  • Gel purification of July 14 [S/P] digested vectors pSB1C3-BBa_J23101, pSB1C3-BBa_J23106 and pSB1C3-BBa_J23117
  • Friday 17
  • Ligation of the [X/P] digested BBa_I13504 insert into [S/P] digested vector pSB1C3-BBa_J23101
  • Ligation of the [X/P] digested BBa_I13504 insert into [S/P] digested vector pSB1C3-BBa_J23106
  • Ligation of the [X/P] digested BBa_I13504 insert into [S/P] digested vector pSB1C3-BBa_J23117
  • Transformation of the 3 ligation product
  • Saturday 18
    Week 10 : July 20 – 25
    Monday 20
  • Redo the transformation of all July 17 ligation product
  • Tuesday 21
  • Redo the transformation of July 17 pSB1C3-BBa_J23101-I13504 and pSB1C3-BBa_J23117-BBa_I13504 ligation product
  • Wednesday 22
  • Extraction of plasmid pSB1C3-BBa_J23106-I13504
  • Restriction analysis with [E/P] of the plasmid pSB1C3-BBa_J23106-BBa_I13504
  • Thursday 23
  • Restriction analysis with [E/P] of the plasmids pSB1C3-BBa_J23101-I13504 and pSB1C3-BBa_J23117-I13504
  • Friday 24
    Saturday 25
    Week 11 : July 27 – August 1
    Monday 27
    Tuesday 28
  • Checking of O.D A600, A511 - Positive control (I20270), negative control (R0040) and the J23101, J23106 and J23117
  • Redo the transformation of pSB1C3-BBa_J23117
  • Wednesday 29
    Thursday 30
  • Extraction of the plasmid pSB1C3-BBa_J23117
  • Restriction digestion [S/P] of pSB1C3-BBa_J23117
  • Restriction digestion [X/P] of pSB1A2-BBa_I13504
  • Gel purification
  • Friday 31
  • Ligation of the [X/P] digested BBa_I13504 insert into the [S/P] digested pSB1C3-J23117
  • Transformation
  • Saturday 1
  • Extraction of the plasmids pSB1C3-BBa_J23117 and pSB1A2_BBa_I13504
  • Extraction of the plasmids pSB1C3-BBa_J23117 and pSB1A2_BBa_I13504
  • Week 12 : August 3 – 8
    Monday 3
  • Redo the extraction of the plasmids pSB1C3-BBa_J23117 and pSB1A2_BBa_I13504
  • Restriction analysis [E/P]
  • Tuesday 4
  • Redo the ligation of the [X/P] digested BBa_I13504 into the [S/P] digested pSB1C3-BBa_J23117