Team:Aix-Marseille/Sequencing/data
TITTLE
Alignment of Sequence_1: [19-17-VF2.seq] with Sequence_2: [pSB1C3-J23101-I13504.xdna]
Similarity : 1037/2988 (34,71 %)
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 1 gtccggcaaaaaagggcaaggtgtcaccaccctgccctttttctttaaaaccgaaaagat 60
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 61 tacttcgcgttatgcaggcttcctcgctcactgactcgctgcgctcggtcgttcggctgc 120
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 121 ggcgagcggtatcagctcactcaaaggcggtaatacggttatccacagaatcaggggata 180
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 181 acgcaggaaagaacatgtgagcaaaaggccagcaaaaggccaggaaccgtaaaaaggccg 240
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 241 cgttgctggcgtttttccacaggctccgcccccctgacgagcatcacaaaaatcgacgct 300
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 301 caagtcagaggtggcgaaacccgacaggactataaagataccaggcgtttccccctggaa 360
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 361 gctccctcgtgcgctctcctgttccgaccctgccgcttaccggatacctgtccgcctttc 420
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 421 tcccttcgggaagcgtggcgctttctcatagctcacgctgtaggtatctcagttcggtgt 480
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 481 aggtcgttcgctccaagctgggctgtgtgcacgaaccccccgttcagcccgaccgctgcg 540
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 541 ccttatccggtaactatcgtcttgagtccaacccggtaagacacgacttatcgccactgg 600
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 601 cagcagccactggtaacaggattagcagagcgaggtatgtaggcggtgctacagagttct 660
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 661 tgaagtggtggcctaactacggctacactagaagaacagtatttggtatctgcgctctgc 720
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 721 tgaagccagttaccttcggaaaaagagttggtagctcttgatccggcaaacaaaccaccg 780
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 781 ctggtagcggtggtttttttgtttgcaagcagcagattacgcgcagaaaaaaaggatctc 840
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 841 aagaagatcctttgatcttttctacggggtctgacgctcagtggaacgaaaactcacgtt 900
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 901 aagggattttggtcatgagattatcaaaaaggatcttcacctagatccttttaaattaaa 960
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 961 aatgaagttttaaatcaatctaaagtatatatgagtaaacttggtctgacagctcgaggc 1020
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 1021 ttggattctcaccaataaaaaacgcccggcggcaaccgagcgttctgaacaaatccagat 1080
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 1081 ggagttctgaggtcattactggatctatcaacaggagtccaagcgagctcgatatcaaat 1140
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 1141 tacgccccgccctgccactcatcgcagtactgttgtaattcattaagcattctgccgaca 1200
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 1201 tggaagccatcacaaacggcatgatgaacctgaatcgccagcggcatcagcaccttgtcg 1260
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 1261 ccttgcgtataatatttgcccatggtgaaaacgggggcgaagaagttgtccatattggcc 1320
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 1321 acgtttaaatcaaaactggtgaaactcacccagggattggctgagacgaaaaacatattc 1380
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 1381 tcaataaaccctttagggaaataggccaggttttcaccgtaacacgccacatcttgcgaa 1440
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 1441 tatatgtgtagaaactgccggaaatcgtcgtggtattcactccagagcgatgaaaacgtt 1500
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 1501 tcagtttgctcatggaaaacggtgtaacaagggtgaacactatcccatatcaccagctca 1560
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 1561 ccgtctttcattgccatacgaaattccggatgagcattcatcaggcgggcaagaatgtga 1620
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 1621 ataaaggccggataaaacttgtgcttatttttctttacggtctttaaaaaggccgtaata 1680
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 1681 tccagctgaacggtctggttataggtacattgagcaactgactgaaatgcctcaaaatgt 1740
Seq_1 1 ------------------------------------------------------------ 0
Seq_2 1741 tctttacgatgccattgggatatatcaacggtggtatatccagtgatttttttctccatt 1800
Seq_1 1 ---------------------------gattacTatAAaan------------------- 14
||| ||| ||||:
Seq_2 1801 ttagcttccttagctcctgaaaatctcgataactcaaaaaatacgcccggtagtgatctt 1860
Seq_1 15 ------------------------------------------------------------ 14
Seq_2 1861 atttcattatggtgaaagttggaacctcttacgtgcccgatcaactcgagtgccacctga 1920
Seq_1 15 ------------------------------------------TaGGCGTaTcAcGaggCA 32
||||||||||||||||||
Seq_2 1921 cgtctaagaaaccattattatcatgacattaacctataaaaataggcgtatcacgaggca 1980
Seq_1 33 GAATTTCAGATAAAAAAAaTCCTTAGCTTTCGCTAAGGATGATTTCTGGAATTCGCGGCC 92
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Seq_2 1981 gaatttcagataaaaaaaatccttagctttcgctaaggatgatttctggaattCGCGGCC 2040
Seq_1 93 GCTTCTAGAGTTTACAGCTAGCTCAGTCCTAGGTATTATGCTAGCTACTAGAGAAAGAGG 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Seq_2 2041 GCTTCTAGAGtttacagctagctcagtcctaggtattatgctagcTActagAGaaagagg 2100
Seq_1 153 AGAAATACTAGATGCGTAAAGGAGAAGAACTTTTCACTGGAGTTGTCCCAATTCTTGTTG 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Seq_2 2101 agaaatactagatgcgtaaaggagaagaacttttcactggagttgtcccaattcttgttg 2160
Seq_1 213 AATTAGATGGTGATGTTAATGGGCACAAATTTTCTGTCAGTGGAGAGGGTGAAGGTGATG 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Seq_2 2161 aattagatggtgatgttaatgggcacaaattttctgtcagtggagagggtgaaggtgatg 2220
Seq_1 273 CAACATACGGAAAACTTACCCTTAAATTTATTTGCACTACTGGAAAACTACCTGTTCCAT 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Seq_2 2221 caacatacggaaaacttacccttaaatttatttgcactactggaaaactacctgttccat 2280
Seq_1 333 GGCCAACACTTGTCACTACTTTCGGTTATGGTGTTCAATGCTTTGCGAGATACCCAGATC 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Seq_2 2281 ggccaacacttgtcactactttcggttatggtgttcaatgctttgcgagatacccagatc 2340
Seq_1 393 ATATGAAACAGCATGACTTTTTCAAGAGTGCCATGCCCGAAGGTTATGTACAGGAAAGAA 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Seq_2 2341 atatgaaacagcatgactttttcaagagtgccatgcccgaaggttatgtacaggaaagaa 2400
Seq_1 453 CTATATTTTTCAAAGATGACGGGAACTACAAGACACGTGCTGAAGTCAAGTTTGAAGGTG 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Seq_2 2401 ctatatttttcaaagatgacgggaactacaagacacgtgctgaagtcaagtttgaaggtg 2460
Seq_1 513 ATACCCTTGTTAATAGAATCGAGTTAAAAGGTATTGATTTTAAAGAAGATGGAAACATTC 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Seq_2 2461 atacccttgttaatagaatcgagttaaaaggtattgattttaaagaagatggaaacattc 2520
Seq_1 573 TTGGACACAAATTGGAATACAACTATAACTCACACAATGTATACATCATGGCAGACAAAC 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Seq_2 2521 ttggacacaaattggaatacaactataactcacacaatgtatacatcatggcagacaaac 2580
Seq_1 633 AAAAGAATGGAATCAAAGTTAACTTCAAAATTAGACACAACATTGAAGATGGAAGCGTTC 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Seq_2 2581 aaaagaatggaatcaaagttaacttcaaaattagacacaacattgaagatggaagcgttc 2640
Seq_1 693 AACTAGCAGACCATTATCAACAAAATACTCCAATTGGCGATGGCCCTGTCCTTTTACCAG 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Seq_2 2641 aactagcagaccattatcaacaaaatactccaattggcgatggccctgtccttttaccag 2700
Seq_1 753 ACAACCATTACCTGTCCACACAATCTGCCCTTTCGAAAGATCCCAACGAAAnGAGAGACC 812
|||||||||||||||||||||||||||||||||||||||||||||||||||:||||||||
Seq_2 2701 acaaccattacctgtccacacaatctgccctttcgaaagatcccaacgaaaagagagacc 2760
Seq_1 813 ACATGGTCCTTCTTGAGTTTGTAACAGCTGCTGGGATTACACATGGCATGGATGAACTAT 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Seq_2 2761 acatggtccttcttgagtttgtaacagctgctgggattacacatggcatggatgaactat 2820
Seq_1 873 ACAAATAATAATACTAGAGCCAGGCATCAAnTAAAACGAAAGGCTCAGTCGAAAGACTGG 932
||||||||||||||||||||||||||||||:|||||||||||||||||||||||||||||
Seq_2 2821 acaaataataatactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgg 2880
Seq_1 933 GCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCtACTAGaGTCACACTGGCTCA 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Seq_2 2881 gcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctca 2940
Seq_1 993 CCTTCGGGTGGGCCTTTCTGCGTTTATATACTAGTAGCGGCCGCTGCAGTCCGGCAaAAn 1052
||||||||||||||||||||||||||||||||||||||||||||||||
Seq_2 2941 ccttcgggtgggcctttctgcgtttataTACTAGTAGCGGCCGCtgca------------ 2988
Seq_1 1053 nGGgCAAGgtgTCACCaCCcTGCCcTTTTtCTTtAAaaCCGAAangaTTACTTCGCgttA 1112
Seq_2 2989 ------------------------------------------------------------ 2988
Seq_1 1113 TGCAGgCTTCCtcgcTCAcTGACTCGCTGCGCtCGgTCGTTCGGCTGcGgCGaacGGtaT 1172
Seq_2 2989 ------------------------------------------------------------ 2988
Seq_1 1173 CAGctc 1178
Seq_2 2989 ------ 2988
Features [Seq_2]:
SpeI : [2970 : 2975 - CW]
EcoRI : [2029 : 2034 - CW]
XbaI : [2044 : 2049 - CW]
PstI : [2984 : 1 - CW]
Suffix : [1 : 1 - CW]
Suffix : [2969 : 2988 - CW]
Suffix : [2969 : 1 - CW]
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