Difference between revisions of "Team:METU Turkey/Design"

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By talking about your design work on this page, there is one medal criterion that you can attempt to meet, and one award that you can apply for. If your team is going for a gold medal by building a functional prototype, you should tell us what you did on this page. If you are going for the <a href="https://2015.igem.org/Judging/Awards#SpecialPrizes">Applied Design award</a>, you should also complete this page and tell us what you did.
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<h4>Note</h4>
 
<p>In order to be considered for the <a href="https://2015.igem.org/Judging/Awards#SpecialPrizes">Best Applied Design award</a> and/or the <a href="https://2015.igem.org/Judging/Awards#Medals">functional prototype gold medal criterion</a>, you must fill out this page.</p>
 
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<p>This is a prize for the team that has developed a synthetic biology product to solve a real world problem in the most elegant way. The students will have considered how well the product addresses the problem versus other potential solutions, how the product integrates or disrupts other products and processes, and how its lifecycle can more broadly impact our lives and environments in positive and negative ways.</p>
 
  
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If you are working on art and design as your main project, please join the art and design track. If you are integrating art and design into the core of your main project, please apply for the award by completing this page.
 
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<td id="rcorners1" align=center > <a class="one" href="https://2015.igem.org/Team:METU_Turkey">HOME</a></td>
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<td id="rcorners1" align=center> <a class="one" href="https://2015.igem.org/Team:METU_Turkey/Team">TEAM</a> </td>
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<td id="rcorners1" align=center><a class="one" href="https://2015.igem.org/Team:METU_Turkey/Project">PROJECT</a></td>
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<td id="rcorners1" align=center><a class="one" href="https://2015.igem.org/Team:METU_Turkey/Parts">PARTS</a></td>
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<td id="rcorners1" align=center><a class="one" href="https://2015.igem.org/Team:METU_Turkey/Notebook">NOTEBOOK</a></td>
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<td id="rcorners1" align=center><a class="one" href="https://2015.igem.org/Team:METU_Turkey/Attributions">ATTRIBUTIONS</a></td>
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<td id="rcorners1" align=center><a class="one" href="https://2015.igem.org/Team:METU_Turkey/interlab">INTERLAB</a></td>
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<td id="rcorners1" align=center><a class="one" href="https://2015.igem.org/Team:METU_Turkey/Collaborations">COLLABORATIONS</a></td>
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<td id="rcorners1" align=center><a class="one" href="https://2015.igem.org/Team:METU_Turkey/Practices">HUMAN PRACTICES</a></td>
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<td id="rcorners1" align=center><a class="one" href="https://2015.igem.org/Team:METU_Turkey/Safety">SAFETY</a></td>
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<td id="rcorners1" align=center><a class="one" href="https://2015.igem.org/Team:METU_Turkey/Modeling">MODELING</a></td>
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<td id="rcorners1" align=center><a class="one" href="https://2015.igem.org/Team:METU_Turkey/Measurement">MEASUREMENT</a></td>
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<td id="rcorners1" align=center><a class="one" href="https://2015.igem.org/Team:METU_Turkey/Galery">GALERY</a></td>
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<td id="rcorners1" align=center><a class="one" href="https://2015.igem.org/Team:METU_Turkey/Sponsors">SPONSORS</a></td>
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<img align=center src="https://static.igem.org/mediawiki/2015/f/f9/LO_ODTU_METU_ACIK_RENKLI_ZEMIN.png" width=100%></br>
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<img hspace="375px" align=center src="https://static.igem.org/mediawiki/2015/0/00/Celiac_stockphoto_1.jpg" width="600px">
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<h2 align=center>Project Description</h2>
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<p align=center>As an autoimmune disorder, celiac disorder depends on sensitivity to wheat ingredients such that gliadin which is a glycoprotein complex rich in proline and glutamine, especially alpha-2-gliadin. Alfa-2-glaidin basically bind to of specific receptor called HLA-DQ2 or HLA-DQ8 (because tTG alter the alfa-2-gliadin’s charge density which results in highly negative charges. This negative charge density create significant binding effect of alfa-2-gliadin to HLA-DQ2 OR HLA-DQ8 ). That receptor is an important key component of immune system, which have loci at chromosome 6. Epitopes of that receptor create cellular signaling pathway which results in arise of T and B-cells. These important immune cells eventually kill the specific antigens presented cells. Thus, in order to interfere this autoimmune disorder, protein’s (gluten) specific subunits, which have key roles at celiac disorder are going to be destroyed before the intake of protein in our project. Fundamentally, adding specific enzymes’ genes to E.coli’s genome. Then, E.coli will be added into dough while it is in fermentation process. So during the process of fermentation, specific enzymes’ genes will be transcribed and break down the gluten. To sum up, with the specific enzyme, which is expressed by E.coli, alters and break down the specific protein subunit which is key component of celiac disorder. In addition, we would like to improve the stiffness of gluten-free bread by letting bacteria to secrete additives. For the efficiency of the gluten destruction process, the homogenization of dough will be also improved by the bacteria secretion of additives. Last but not least, receptor complex within E.coli is going to be designed and enable bacteria to express receptor which is like HLA-DQ; in order to detect whether there is a gluten or not.</p>
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Revision as of 07:13, 4 September 2015

HOME TEAM PROJECT PARTS NOTEBOOK ATTRIBUTIONS INTERLAB
COLLABORATIONS HUMAN PRACTICES SAFETY MODELING MEASUREMENT GALERY SPONSORS

Project Description

As an autoimmune disorder, celiac disorder depends on sensitivity to wheat ingredients such that gliadin which is a glycoprotein complex rich in proline and glutamine, especially alpha-2-gliadin. Alfa-2-glaidin basically bind to of specific receptor called HLA-DQ2 or HLA-DQ8 (because tTG alter the alfa-2-gliadin’s charge density which results in highly negative charges. This negative charge density create significant binding effect of alfa-2-gliadin to HLA-DQ2 OR HLA-DQ8 ). That receptor is an important key component of immune system, which have loci at chromosome 6. Epitopes of that receptor create cellular signaling pathway which results in arise of T and B-cells. These important immune cells eventually kill the specific antigens presented cells. Thus, in order to interfere this autoimmune disorder, protein’s (gluten) specific subunits, which have key roles at celiac disorder are going to be destroyed before the intake of protein in our project. Fundamentally, adding specific enzymes’ genes to E.coli’s genome. Then, E.coli will be added into dough while it is in fermentation process. So during the process of fermentation, specific enzymes’ genes will be transcribed and break down the gluten. To sum up, with the specific enzyme, which is expressed by E.coli, alters and break down the specific protein subunit which is key component of celiac disorder. In addition, we would like to improve the stiffness of gluten-free bread by letting bacteria to secrete additives. For the efficiency of the gluten destruction process, the homogenization of dough will be also improved by the bacteria secretion of additives. Last but not least, receptor complex within E.coli is going to be designed and enable bacteria to express receptor which is like HLA-DQ; in order to detect whether there is a gluten or not.