Team:Brasil-USP/Modeling/Optimizations

BioInformatics

Modeling

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Table of contents

  • <a href="#mainidea">Main idea</a>
  • <a href="#dynamics">Enzymatic reaction</a>

We have developed several libraries in Python and a comprehensive guide through our material and code. Our main idea is to spread further several techniques on modeling and simulations for synthetic biology. Everything is hosted on GitHub and publicly available for anyone in the world. We really tried to close the gap between modeling and experimentation as much as possible. For instance, the software we developed was used to analyze our <a href="/Team:Brasil-USP/interlabstudy">Interlab Study</a> and all results from the wet lab.

This material will be continuously be available and in the following we will go through some of what we have developed.

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Numerical techniques


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Data fitting and analysis


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96-well Plate Analyzer


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Statistical tests



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