Difference between revisions of "Team:UChicago/References"

(Created page with "{{UChicago/Header}} <html> </html> {{UChicago/Footer}}")
 
 
Line 1: Line 1:
 
{{UChicago/Header}}
 
{{UChicago/Header}}
 
 
<html>
 
<html>
 +
 +
<head>
 +
<meta http-equiv=Content-Type content="text/html; charset=windows-1252">
 +
<meta name=Generator content="Microsoft Word 15 (filtered)">
 +
<style>
 +
<!--
 +
/* Font Definitions */
 +
@font-face
 +
{font-family:"Cambria Math";
 +
panose-1:2 4 5 3 5 4 6 3 2 4;}
 +
@font-face
 +
{font-family:Calibri;
 +
panose-1:2 15 5 2 2 2 4 3 2 4;}
 +
@font-face
 +
{font-family:Garamond;
 +
panose-1:2 2 4 4 3 3 1 1 8 3;}
 +
/* Style Definitions */
 +
p.MsoNormal, li.MsoNormal, div.MsoNormal
 +
{margin-top:0in;
 +
margin-right:0in;
 +
margin-bottom:8.0pt;
 +
margin-left:0in;
 +
line-height:107%;
 +
font-size:12.0pt;
 +
font-family:"Times New Roman",serif;}
 +
p
 +
{margin-right:0in;
 +
margin-left:0in;
 +
font-size:12.0pt;
 +
font-family:"Times New Roman",serif;}
 +
.MsoChpDefault
 +
{font-size:12.0pt;}
 +
.MsoPapDefault
 +
{margin-bottom:8.0pt;
 +
line-height:107%;}
 +
@page WordSection1
 +
{size:8.5in 11.0in;
 +
margin:1.0in 1.0in 1.0in 1.0in;}
 +
div.WordSection1
 +
{page:WordSection1;}
 +
-->
 +
</style>
 +
 +
</head>
 +
 +
<body lang=EN-US>
 +
 +
<div class=WordSection1>
 +
 +
<p align=center style='margin-left:24.0pt;text-align:center;text-indent:-24.0pt'><b><span
 +
style='font-size:32.0pt;font-family:"Calibri",sans-serif;color:#C00000'>References</span></b></p>
 +
 +
<p align=center style='margin-left:24.0pt;text-align:center;text-indent:-24.0pt'><img
 +
width=364 height=372 id="Picture 1" src="..//wiki/images/f/fd/UChicago2015References_filesimage001.jpg"
 +
alt="http://i0.kym-cdn.com/entries/icons/facebook/000/017/204/CaptainAmerica1_zps8c295f96.JPG"></p>
 +
 +
<p style='margin-left:24.0pt;text-indent:-24.0pt'><b><span style='font-size:
 +
16.0pt;font-family:"Garamond",serif'>The following cited works have been
 +
referenced throughout our wiki and presentation. They directly helped us in
 +
thinking about construct and experimental design. </span></b></p>
 +
 +
<p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;line-height:
 +
normal'><span style='font-size:16.0pt;font-family:"Garamond",serif'>Chen, A.
 +
H., Lubkowicz, D., Yeong, V., Chang, R. L., &amp; Silver, P. a. (2015a). Transplantability
 +
of a circadian clock to a noncircadian organism. Science Advance, 1(5), 1–6. </span><a
 +
href="http://doi.org/10.1126/sciadv.1500358"><span style='font-size:16.0pt;
 +
font-family:"Garamond",serif;color:#1155CC'>http://doi.org/10.1126/sciadv.1500358</span></a></p>
 +
 +
<p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;line-height:
 +
normal'><span style='font-size:16.0pt;font-family:"Garamond",serif'>&nbsp;</span></p>
 +
 +
<p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;line-height:
 +
normal'><span style='font-size:16.0pt;font-family:"Garamond",serif'>Gutu, A.,
 +
&amp; O’Shea, E. K. (2013). Two Antagonistic Clock-Regulated Histidine Kinases
 +
Time the Activation of Circadian Gene Expression. Molecular Cell, 50(2),
 +
288–294. </span><a href="http://doi.org/10.1016/j.molcel.2013.02.022"><span
 +
style='font-size:16.0pt;font-family:"Garamond",serif;color:#1155CC'>http://doi.org/10.1016/j.molcel.2013.02.022</span></a></p>
 +
 +
<p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;line-height:
 +
normal'><span style='font-size:16.0pt;font-family:"Garamond",serif'>&nbsp;</span></p>
 +
 +
<p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;line-height:
 +
normal'><span style='font-size:16.0pt;font-family:"Garamond",serif'>Kutsuna,
 +
S., Nakahira, Y., Katayama, M., Ishiura, M., &amp; Kondo, T. (2005).
 +
Transcriptional regulation of the circadian clock operon kaiBC by upstream
 +
regions in cyanobacteria. Molecular Microbiology, 57(5), 1474–1484. </span><a
 +
href="http://doi.org/10.1111/j.1365-2958.2005.04781.x"><span style='font-size:
 +
16.0pt;font-family:"Garamond",serif;color:#1155CC'>http://doi.org/10.1111/j.1365-2958.2005.04781.x</span></a></p>
 +
 +
<p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;line-height:
 +
normal'><span style='font-size:16.0pt;font-family:"Garamond",serif'>&nbsp;</span></p>
 +
 +
<p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;line-height:
 +
normal'><span style='font-size:16.0pt;font-family:"Garamond",serif'>Markson, J.
 +
S., Piechura, J. R., Puszynska, A. M., &amp; O’Shea, E. K. (2013). Circadian
 +
control of global gene expression by the cyanobacterial master regulator RpaA.
 +
Cell, 155(6), 1396–1408. </span><a
 +
href="http://doi.org/10.1016/j.cell.2013.11.005"><span style='font-size:16.0pt;
 +
font-family:"Garamond",serif;color:#1155CC'>http://doi.org/10.1016/j.cell.2013.11.005</span></a></p>
 +
 +
<p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;line-height:
 +
normal'><span style='font-size:16.0pt;font-family:"Garamond",serif'>&nbsp;</span></p>
 +
 +
<p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;line-height:
 +
normal'><span style='font-size:16.0pt;font-family:"Garamond",serif'>Nakajima,
 +
M., Imai, K., Ito, H., Nishiwaki, T., Murayama, Y., Iwasaki, H., … Kondo, T.
 +
(2005). Reconstitution of circadian oscillation of cyanobacterial KaiC
 +
phosphorylation in vitro. Science (New York, N.Y.), 308(5720), 414–415. </span><a
 +
href="http://doi.org/10.1126/science.1108451"><span style='font-size:16.0pt;
 +
font-family:"Garamond",serif;color:#1155CC'>http://doi.org/10.1126/science.1108451</span></a></p>
 +
 +
<p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;line-height:
 +
normal'><span style='font-size:16.0pt;font-family:"Garamond",serif'>&nbsp;</span></p>
 +
 +
<p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;line-height:
 +
normal'><span style='font-size:16.0pt;font-family:"Garamond",serif'>Nakajima,
 +
M., Ito, H., &amp; Kondo, T. (2010). In vitro regulation of circadian
 +
phosphorylation rhythm of cyanobacterial clock protein KaiC by KaiA and KaiB.
 +
FEBS Letters, 584(5), 898–902. </span><a
 +
href="http://doi.org/10.1016/j.febslet.2010.01.016"><span style='font-size:
 +
16.0pt;font-family:"Garamond",serif;color:#1155CC'>http://doi.org/10.1016/j.febslet.2010.01.016</span></a></p>
 +
 +
<p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;line-height:
 +
normal'><span style='font-size:16.0pt;font-family:"Garamond",serif'>&nbsp;</span></p>
 +
 +
<p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;line-height:
 +
normal'><span style='font-size:16.0pt;font-family:"Garamond",serif'>Pattanayak,
 +
G., &amp; Rust, M. J. (2014). The cyanobacterial clock and metabolism. Current
 +
Opinion in Microbiology, 18(1), 90–95. </span><a
 +
href="http://doi.org/10.1016/j.mib.2014.02.010"><span style='font-size:16.0pt;
 +
font-family:"Garamond",serif;color:#1155CC'>http://doi.org/10.1016/j.mib.2014.02.010</span></a></p>
 +
 +
<p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;line-height:
 +
normal'><span style='font-size:16.0pt;font-family:"Garamond",serif'>&nbsp;</span></p>
 +
 +
<p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;line-height:
 +
normal'><span style='font-size:16.0pt;font-family:"Garamond",serif'>Rust, M.
 +
J., Markson, J. S., Lane, W. S., Fisher, D. S., &amp; O’Shea, E. K. (2007).
 +
Ordered phosphorylation governs oscillation of a three-protein circadian clock.
 +
Science (New York, N.Y.), 318(5851), 809–812. </span><a
 +
href="http://doi.org/10.1126/science.1148596"><span style='font-size:16.0pt;
 +
font-family:"Garamond",serif;color:#1155CC'>http://doi.org/10.1126/science.1148596</span></a></p>
 +
 +
<p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;line-height:
 +
normal'><span style='font-size:16.0pt;font-family:"Garamond",serif'>&nbsp;</span></p>
 +
 +
<p class=MsoNormal style='margin-bottom:0in;margin-bottom:.0001pt;line-height:
 +
normal'><span style='font-size:16.0pt;font-family:"Garamond",serif'>Taniguchi,
 +
Y., Takai, N., Katayama, M., Kondo, T., &amp; Oyama, T. (2010). Three major
 +
output pathways from the KaiABC-based oscillator cooperate to generate robust
 +
circadian kaiBC expression in cyanobacteria. Proceedings of the National
 +
Academy of Sciences of the United States of America, 107(7), 3263–3268. </span><a
 +
href="http://doi.org/10.1073/pnas.0909924107"><span style='font-size:16.0pt;
 +
font-family:"Garamond",serif;color:#1155CC'>http://doi.org/10.1073/pnas.0909924107</span></a></p>
 +
 +
<p class=MsoNormal><span style='font-size:11.0pt;line-height:107%'>&nbsp;</span></p>
 +
 +
</div>
 +
 +
</body>
  
 
</html>
 
</html>
 +
  
 
{{UChicago/Footer}}
 
{{UChicago/Footer}}

Latest revision as of 04:53, 9 October 2015

Team UChicago banner.jpg

References

http://i0.kym-cdn.com/entries/icons/facebook/000/017/204/CaptainAmerica1_zps8c295f96.JPG

The following cited works have been referenced throughout our wiki and presentation. They directly helped us in thinking about construct and experimental design.

Chen, A. H., Lubkowicz, D., Yeong, V., Chang, R. L., & Silver, P. a. (2015a). Transplantability of a circadian clock to a noncircadian organism. Science Advance, 1(5), 1–6. http://doi.org/10.1126/sciadv.1500358

 

Gutu, A., & O’Shea, E. K. (2013). Two Antagonistic Clock-Regulated Histidine Kinases Time the Activation of Circadian Gene Expression. Molecular Cell, 50(2), 288–294. http://doi.org/10.1016/j.molcel.2013.02.022

 

Kutsuna, S., Nakahira, Y., Katayama, M., Ishiura, M., & Kondo, T. (2005). Transcriptional regulation of the circadian clock operon kaiBC by upstream regions in cyanobacteria. Molecular Microbiology, 57(5), 1474–1484. http://doi.org/10.1111/j.1365-2958.2005.04781.x

 

Markson, J. S., Piechura, J. R., Puszynska, A. M., & O’Shea, E. K. (2013). Circadian control of global gene expression by the cyanobacterial master regulator RpaA. Cell, 155(6), 1396–1408. http://doi.org/10.1016/j.cell.2013.11.005

 

Nakajima, M., Imai, K., Ito, H., Nishiwaki, T., Murayama, Y., Iwasaki, H., … Kondo, T. (2005). Reconstitution of circadian oscillation of cyanobacterial KaiC phosphorylation in vitro. Science (New York, N.Y.), 308(5720), 414–415. http://doi.org/10.1126/science.1108451

 

Nakajima, M., Ito, H., & Kondo, T. (2010). In vitro regulation of circadian phosphorylation rhythm of cyanobacterial clock protein KaiC by KaiA and KaiB. FEBS Letters, 584(5), 898–902. http://doi.org/10.1016/j.febslet.2010.01.016

 

Pattanayak, G., & Rust, M. J. (2014). The cyanobacterial clock and metabolism. Current Opinion in Microbiology, 18(1), 90–95. http://doi.org/10.1016/j.mib.2014.02.010

 

Rust, M. J., Markson, J. S., Lane, W. S., Fisher, D. S., & O’Shea, E. K. (2007). Ordered phosphorylation governs oscillation of a three-protein circadian clock. Science (New York, N.Y.), 318(5851), 809–812. http://doi.org/10.1126/science.1148596

 

Taniguchi, Y., Takai, N., Katayama, M., Kondo, T., & Oyama, T. (2010). Three major output pathways from the KaiABC-based oscillator cooperate to generate robust circadian kaiBC expression in cyanobacteria. Proceedings of the National Academy of Sciences of the United States of America, 107(7), 3263–3268. http://doi.org/10.1073/pnas.0909924107

 


Your Website Title

Like our team Facebook page, Genehackers@UChicago!

Questions? Comments? Send us an email!