Difference between revisions of "Team:ETH Zurich/Modeling/Parameters"
m |
|||
| Line 7: | Line 7: | ||
<table> | <table> | ||
<tr> <th>Name </th> <th>Description </th><th>Value </th><th>References/Estimation </th> </tr> | <tr> <th>Name </th> <th>Description </th><th>Value </th><th>References/Estimation </th> </tr> | ||
| + | <tr><td>\(K_{d,\text{LuxRAHL}}\)</td><td>100nM</td><td>Dissociation constant between luxR and AHL</td><td><a href="https://2015.igem.org/Team:ETH_Zurich/References#Weber2013">Weber, 2013</a></td></tr> | ||
<tr><td>\(K_{d,\text{LuxRAHL}}\)</td><td>100nM</td><td>Dissociation constant between luxR and AHL</td><td><a href="https://2015.igem.org/Team:ETH_Zurich/References#Weber2013">Weber, 2013</a></td></tr> | <tr><td>\(K_{d,\text{LuxRAHL}}\)</td><td>100nM</td><td>Dissociation constant between luxR and AHL</td><td><a href="https://2015.igem.org/Team:ETH_Zurich/References#Weber2013">Weber, 2013</a></td></tr> | ||
</table> | </table> | ||
| Line 14: | Line 15: | ||
<table> | <table> | ||
<tr> <th>Name </th> <th>Description </th><th>Value </th><th>References/Estimation </th> </tr> | <tr> <th>Name </th> <th>Description </th><th>Value </th><th>References/Estimation </th> </tr> | ||
| − | <tr> <td>Lac | + | <tr> <td>\(\text{Lac}_{\text{ini}}\)</td> <td> Initial concentration of lactate in the medium </td><td> 1 μM</td> <td>Low concentration of lactate in the medium</td> </tr> |
<tr> <td>Kdll<SUB>ini</SUB></td> <td> Initial concentration of lactate in the medium </td> <td></td> <td> </td> </tr> | <tr> <td>Kdll<SUB>ini</SUB></td> <td> Initial concentration of lactate in the medium </td> <td></td> <td> </td> </tr> | ||
</table> | </table> | ||
Revision as of 14:57, 20 August 2015
- Project
- Modeling
- Lab
- Human
Practices - Parts
- About Us
Parameters
AHL module
Single cell model
| Name | Description | Value | References/Estimation |
|---|---|---|---|
| \(K_{d,\text{LuxRAHL}}\) | 100nM | Dissociation constant between luxR and AHL | Weber, 2013 |
| \(K_{d,\text{LuxRAHL}}\) | 100nM | Dissociation constant between luxR and AHL | Weber, 2013 |
Lactate module
Single cell model
Assumptions
| Name | Description | Value | References/Estimation |
|---|---|---|---|
| \(\text{Lac}_{\text{ini}}\) | Initial concentration of lactate in the medium | 1 μM | Low concentration of lactate in the medium |
| Kdllini | Initial concentration of lactate in the medium |