Difference between revisions of "Team:ETH Zurich/Modeling/Parameters"
| Line 7: | Line 7: | ||
<table> | <table> | ||
<tr> <th>Name </th> <th>Description </th><th>Value </th><th>References/Estimation </th> </tr> | <tr> <th>Name </th> <th>Description </th><th>Value </th><th>References/Estimation </th> </tr> | ||
| − | <tr><td>\(K_{d,\text{LuxRAHL}}\)</td><td> | + | <tr><td>\(K_{d,\text{LuxRAHL}}\)</td><td>100 nM</td><td>Dissociation constant between luxR and AHL</td><td><a href="https://2015.igem.org/Team:ETH_Zurich/References#Weber2013">Weber, 2013</a></td></tr> |
| − | <tr><td>\( | + | <tr><td>\(\text{LuxR}_\text{tot}\)</td><td>0.0025 μM</td><td>Total concentration of LuxR </td><td>assumed</td></tr> |
| + | <tr><td>\(a_\mathrm{LuxI}\)</td><td>1 μM.min<SUP>-1</SUP></td><td>Maximal production rate of LuxI</td><td>assumed</td></tr> | ||
</table> | </table> | ||
| + | |||
<h2>Lactate module</h2> | <h2>Lactate module</h2> | ||
<h3>Single cell model</h3> | <h3>Single cell model</h3> | ||
Revision as of 15:05, 20 August 2015
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Parameters
AHL module
Single cell model
| Name | Description | Value | References/Estimation |
|---|---|---|---|
| \(K_{d,\text{LuxRAHL}}\) | 100 nM | Dissociation constant between luxR and AHL | Weber, 2013 |
| \(\text{LuxR}_\text{tot}\) | 0.0025 μM | Total concentration of LuxR | assumed |
| \(a_\mathrm{LuxI}\) | 1 μM.min-1 | Maximal production rate of LuxI | assumed |
Lactate module
Single cell model
Assumptions
| Name | Description | Value | References/Estimation |
|---|---|---|---|
| \(\text{Lac}_{\text{ini}}\) | Initial concentration of lactate in the medium | 1 μM | Low concentration of lactate in the medium |
| Kdllini | Initial concentration of lactate in the medium |