Difference between revisions of "Team:Dundee/Sequences"

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        <tr>
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            <td width="312" valign="top">
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                <p align="center">
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<table border="1" cellspacing="0" cellpadding="0">
                    <strong>Registry - ID</strong> <!-- e.g. BBa_K1590000-->
+
                </p>
+
            </td>
+
            <td width="312" valign="top">
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                <p align="center">
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                    <strong>Name</strong> <!--e.g. Haemoglobin A-->
+
                </p>
+
            </td>
+
            <td width="312" valign="top">
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                <p align="center">
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                    <strong>Short Description</strong> <!-- -->
+
                </p>
+
            </td>
+
            <td width="312" valign="top">
+
                <p align="center">
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                    <strong>Part of which tool</strong> <!--e.g. BioSpray - Blood detection-->
+
                </p>
+
            </td>
+
            <td width="312" valign="top">
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                <p align="center">
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                    <strong>Sequences</strong> <!--popup-modal with fasta sequence-->
+
                </p>
+
            </td>           
+
        </tr>
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        <tr>
+
<tbody color="black">
            <td width="312" valign="top">
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<tr>
                <p align="center">
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<td width="312" valign="top">
                    <strong><a href="http://parts.igem.org/Part:BBa_K1590000" target="_blank">BBa_K1590000</a></strong>
+
<p align="center">
                </p>
+
<strong>Registry - ID</strong> <!-- e.g. BBa_K1590000-->
            </td>
+
</p>
            <td width="312" valign="top">
+
</td>
                <p align="center">
+
<td width="312" valign="top">
                    <strong>Haemoglobin A (Homo sapiens)</strong>
+
<p align="center">
                </p>
+
<strong>Name</strong> <!--e.g. Haemoglobin A-->
            </td>
+
</p>
            <td width="312" valign="top">
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</td>
                <p align="center">
+
<td width="312" valign="top">
                    <strong>Coding sequence for Human Haemoglobin A in silico optimised for increased expression level in E.coli K12.</strong>
+
<p align="center">
                </p>
+
<strong>Short Description</strong> <!-- -->
            </td>
+
</p>
            <td width="312" valign="top">
+
</td>
                <p align="center">
+
<td width="312" valign="top">
                    <strong>BioSpray - Blood Detection</strong>
+
<p align="center">
                </p>
+
<strong>Part of which tool</strong> <!--e.g. BioSpray - Blood detection-->
            </td>
+
</p>
            <td width="312" valign="top">
+
</td>
                <p align="center">
+
<td width="312" valign="top">
                    <strong><a data-toggle="modal" data-target="#sequence_haemoglobina_modal" class="journal-protocol"> Fasta Sequence </a></strong>
+
<p align="center">
                </p>
+
<strong>Sequences</strong> <!--popup-modal with fasta sequence-->
                <p align="center">
+
</p>
                    <strong><a data-toggle="modal" data-target="#sequence_haemoglobina_primer_modal" class="journal-protocol"> Primers </a></strong>
+
</td>            
                </p>              
+
</tr>
            </td>
+
        </tr>
+
  
        <tr>
+
<tr>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong><a href="http://parts.igem.org/Part:BBa_K1590001" target="_blank">BBa_K1590001</a></strong>
+
<strong><a href="http://parts.igem.org/Part:BBa_K1590000" target="_blank">BBa_K1590000</a></strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
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<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>Haemoglobin B (Homo sapiens)</strong>
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<strong>Haemoglobin A (Homo sapiens)</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>Coding sequence for Human Haemoglobin A in silico optimised for increased expression level in E.coli K12.</strong>
+
<strong>Coding sequence for Human Haemoglobin A in silico optimised for increased expression level in E.coli K12.</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>BioSpray - Blood Detection</strong>
+
<strong>BioSpray - Blood Detection</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong><a data-toggle="modal" data-target="#sequence_haemoglobinb_modal" class="journal-protocol"> Fasta Sequence </a></strong>
+
<strong><a data-toggle="modal" data-target="#sequence_haemoglobina_modal" class="journal-protocol"> Fasta Sequence </a></strong>
                </p>
+
</p>
                <p align="center">
+
<p align="center">
                    <strong><a data-toggle="modal" data-target="#sequence_haemoglobinb_primer_modal" class="journal-protocol"> Primers </a></strong>
+
<strong><a data-toggle="modal" data-target="#sequence_haemoglobina_primer_modal" class="journal-protocol"> Primers </a></strong>
                </p>                 
+
</p>                 
            </td>
+
</td>
        </tr>
+
</tr>
  
        <tr>
+
<tr>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong><a href="http://parts.igem.org/Part:BBa_K1590002" target="_blank">BBa_K1590002</a></strong>
+
<strong><a href="http://parts.igem.org/Part:BBa_K1590001" target="_blank">BBa_K1590001</a></strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>Haptoglobin (Homo sapiens)</strong>
+
<strong>Haemoglobin B (Homo sapiens)</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>Coding sequence for Human Haemoglobin A in silico optimised for increased expression level in E.coli K12.</strong>
+
<strong>Coding sequence for Human Haemoglobin A in silico optimised for increased expression level in E.coli K12.</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>BioSpray - Blood Detection</strong>
+
<strong>BioSpray - Blood Detection</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong><a data-toggle="modal" data-target="#sequence_haptoglobin_modal" class="journal-protocol"> Fasta Sequence </a></strong>
+
<strong><a data-toggle="modal" data-target="#sequence_haemoglobinb_modal" class="journal-protocol"> Fasta Sequence </a></strong>
                </p>
+
</p>
                <p align="center">
+
<p align="center">
                    <strong><a data-toggle="modal" data-target="#sequence_haptoglobin_primer_modal" class="journal-protocol"> Primers </a></strong>
+
<strong><a data-toggle="modal" data-target="#sequence_haemoglobinb_primer_modal" class="journal-protocol"> Primers </a></strong>
                </p>
+
</p>              
            </td>
+
</td>
        </tr>
+
</tr>
  
        <!--Chromate Detection-->
+
<tr>
        <tr>
+
<td width="312" valign="top">
            <td width="312" valign="top">
+
<p align="center">
                <p align="center">
+
<strong><a href="http://parts.igem.org/Part:BBa_K1590002" target="_blank">BBa_K1590002</a></strong>
                    <strong><a href="http://parts.igem.org/Part:BBa_K1058008" target="_blank">BBa_K1058008 (BIT-2013)</a></strong>
+
</p>
                </p>
+
</td>
            </td>
+
<td width="312" valign="top">
            <td width="312" valign="top">
+
<p align="center">
                <p align="center">
+
<strong>Haptoglobin (Homo sapiens)</strong>
                    <strong>pChr-ChrB-GFP</strong>
+
</p>
                </p>
+
</td>
            </td>
+
<td width="312" valign="top">
            <td width="312" valign="top">
+
<p align="center">
                <p align="center">
+
<strong>Coding sequence for Human Haemoglobin A in silico optimised for increased expression level in E.coli K12.</strong>
                    <strong>Partial sequence of chromate resistance operon of Ochrobactrum tritici 5bvl1, containing a chromate-inducible promoter, pChr, a repressor, ChrB, and a fluorescen reporter, GFP.</strong>
+
</p>
                </p>
+
</td>
            </td>
+
<td width="312" valign="top">
            <td width="312" valign="top">
+
<p align="center">
                <p align="center">
+
<strong>BioSpray - Blood Detection</strong>
                    <strong>Chromate Detection</strong>
+
</p>
                </p>
+
</td>
            </td>
+
<td width="312" valign="top">
            <td width="312" valign="top">
+
<p align="center">
                <p align="center">
+
<strong><a data-toggle="modal" data-target="#sequence_haptoglobin_modal" class="journal-protocol"> Fasta Sequence </a></strong>
                    <strong><a data-toggle="modal" data-target="#sequence_pchrbgfp_modal" class="journal-protocol"> Fasta Sequence </a></strong>
+
</p>
                </p>
+
<p align="center">
                <p align="center">
+
<strong><a data-toggle="modal" data-target="#sequence_haptoglobin_primer_modal" class="journal-protocol"> Primers </a></strong>
                    <strong><a data-toggle="modal" data-target="#sequence_pchrbgfp_primer_modal" class="journal-protocol"> Primers </a></strong>
+
</p>
                </p>
+
</td>
            </td>
+
</tr>
        </tr>
+
  
        <tr>
+
<!--Chromate Detection-->
            <td width="312" valign="top">
+
<tr>
                <p align="center">
+
<td width="312" valign="top">
                    <strong><a href="http://parts.igem.org/Part:BBa_K1590003" target="_blank">BBa_K1590003</a></strong>
+
<p align="center">
                </p>
+
<strong><a href="http://parts.igem.org/Part:BBa_K1058008" target="_blank">BBa_K1058008 (BIT-2013)</a></strong>
            </td>
+
</p>
            <td width="312" valign="top">
+
</td>
                <p align="center">
+
<td width="312" valign="top">
                    <strong>pChr</strong>
+
<p align="center">
                </p>
+
<strong>pChr-ChrB-GFP</strong>
            </td>
+
</p>
            <td width="312" valign="top">
+
</td>
                <p align="center">
+
<td width="312" valign="top">
                    <strong>Promoter sequence of chromate resistance operon of Ochrobactrum tritici 5bvl1.</strong>
+
<p align="center">
                </p>
+
<strong>Partial sequence of chromate resistance operon of Ochrobactrum tritici 5bvl1, containing a chromate-inducible promoter, pChr, a repressor, ChrB, and a fluorescen reporter, GFP.</strong>
            </td>
+
</p>
            <td width="312" valign="top">
+
</td>
                <p align="center">
+
<td width="312" valign="top">
                    <strong>Chromate Detection</strong>
+
<p align="center">
                </p>
+
<strong>Chromate Detection</strong>
            </td>
+
</p>
            <td width="312" valign="top">
+
</td>
                <p align="center">
+
<td width="312" valign="top">
                    <strong><a data-toggle="modal" data-target="#sequence_pchr_modal" class="journal-protocol"> Fasta Sequence </a></strong>
+
<p align="center">
                </p>
+
<strong><a data-toggle="modal" data-target="#sequence_pchrbgfp_modal" class="journal-protocol"> Fasta Sequence </a></strong>
                <p align="center">
+
</p>
                    <strong><a data-toggle="modal" data-target="#sequence_pchr_primer_modal" class="journal-protocol"> Primers </a></strong>
+
<p align="center">
                </p>
+
<strong><a data-toggle="modal" data-target="#sequence_pchrbgfp_primer_modal" class="journal-protocol"> Primers </a></strong>
            </td>
+
</p>
        </tr>
+
</td>
 +
</tr>
  
        <tr>
+
<tr>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>-</strong>
+
<strong><a href="http://parts.igem.org/Part:BBa_K1590003" target="_blank">BBa_K1590003</a></strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>ChrB</strong>
+
<strong>pChr</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>Coding sequence for unmodified chromate sensitive repressor of pChr.</strong>
+
<strong>Promoter sequence of chromate resistance operon of Ochrobactrum tritici 5bvl1.</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>Chromate Detection</strong>
+
<strong>Chromate Detection</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong><a data-toggle="modal" data-target="#sequence_chrbunmodified_modal" class="journal-protocol"> Fasta Sequence </a></strong>
+
<strong><a data-toggle="modal" data-target="#sequence_pchr_modal" class="journal-protocol"> Fasta Sequence </a></strong>
                </p>
+
</p>
                <p align="center">
+
<p align="center">
                    <strong><a data-toggle="modal" data-target="#sequence_chrbunmodified_primer_modal" class="journal-protocol"> Primers </a></strong>
+
<strong><a data-toggle="modal" data-target="#sequence_pchr_primer_modal" class="journal-protocol"> Primers </a></strong>
                </p>
+
</p>
            </td>
+
</td>
        </tr>
+
</tr>
  
        <tr>
+
<tr>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong><a href="http://parts.igem.org/Part:BBa_K1590004" target="_blank">BBa_K1590004</a></strong>
+
<strong>-</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>ChrBopt</strong>
+
<strong>ChrB</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>Coding sequence for partially optimised chromate sensitive repressor of pChr.</strong>
+
<strong>Coding sequence for unmodified chromate sensitive repressor of pChr.</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>Chromate Detection</strong>
+
<strong>Chromate Detection</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong><a data-toggle="modal" data-target="#sequence_chrbopt_modal" class="journal-protocol"> Fasta Sequence </a></strong>
+
<strong><a data-toggle="modal" data-target="#sequence_chrbunmodified_modal" class="journal-protocol"> Fasta Sequence </a></strong>
                </p>
+
</p>
                <p align="center">
+
<p align="center">
                    <strong><a data-toggle="modal" data-target="#sequence_chrbopt_primer_modal" class="journal-protocol"> Primers </a></strong>
+
<strong><a data-toggle="modal" data-target="#sequence_chrbunmodified_primer_modal" class="journal-protocol"> Primers </a></strong>
                </p>
+
</p>
            </td>
+
</td>
        </tr>
+
</tr>
  
        <tr>
+
<tr>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong><a href="http://parts.igem.org/Part:BBa_K1590005" target="_blank">BBa_K1590005</a></strong>
+
<strong><a href="http://parts.igem.org/Part:BBa_K1590004" target="_blank">BBa_K1590004</a></strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>pChrGFP</strong>
+
<strong>ChrBopt</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>Sequence of fluorescent reporter-fusion, chromate sensitive promoter + GFP.</strong>
+
<strong>Coding sequence for partially optimised chromate sensitive repressor of pChr.</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>Chromate Detection</strong>
+
<strong>Chromate Detection</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong><a data-toggle="modal" data-target="#sequence_pchrgfp_modal" class="journal-protocol"> Fasta Sequence </a></strong>
+
<strong><a data-toggle="modal" data-target="#sequence_chrbopt_modal" class="journal-protocol"> Fasta Sequence </a></strong>
                </p>
+
</p>
                <p align="center">
+
<p align="center">
                    <strong><a data-toggle="modal" data-target="#sequence_pchrgfp_primer_modal" class="journal-protocol"> Primers </a></strong>
+
<strong><a data-toggle="modal" data-target="#sequence_chrbopt_primer_modal" class="journal-protocol"> Primers </a></strong>
                </p>
+
</p>
            </td>
+
</td>
        </tr>
+
</tr>
  
        <!--Fingerprint Ageing-->
+
<tr>
        <tr>
+
<td width="312" valign="top">
            <td width="312" valign="top">
+
<p align="center">
                <p align="center">
+
<strong><a href="http://parts.igem.org/Part:BBa_K1590005" target="_blank">BBa_K1590005</a></strong>
                    <strong><a href="http://parts.igem.org/Part:BBa_K1590006" target="_blank">BBa_K1590006</a></strong>
+
</p>
                </p>
+
</td>
            </td>
+
<td width="312" valign="top">
            <td width="312" valign="top">
+
<p align="center">
                <p align="center">
+
<strong>pChrGFP</strong>
                    <strong>Lanosterol Synthase (Homo Sapiens)</strong>
+
</p>
                </p>
+
</td>
            </td>
+
<td width="312" valign="top">
            <td width="312" valign="top">
+
<p align="center">
                <p align="center">
+
<strong>Sequence of fluorescent reporter-fusion, chromate sensitive promoter + GFP.</strong>
                    <strong>Coding sequence for Human lanosterol synthase in silico optimised for increased expression level in E. coli K12.</strong>
+
</p>
                </p>
+
</td>
            </td>
+
<td width="312" valign="top">
            <td width="312" valign="top">
+
<p align="center">
                <p align="center">
+
<strong>Chromate Detection</strong>
                    <strong>Fingerprint Ageing</strong>
+
</p>
                </p>
+
</td>
            </td>
+
<td width="312" valign="top">
            <td width="312" valign="top">
+
<p align="center">
                <p align="center">
+
<strong><a data-toggle="modal" data-target="#sequence_pchrgfp_modal" class="journal-protocol"> Fasta Sequence </a></strong>
                    <strong><a data-toggle="modal" data-target="#sequence_lanosterolsynthase_modal" class="journal-protocol"> Fasta Sequence </a></strong>
+
</p>
                </p>
+
<p align="center">
                <p align="center">
+
<strong><a data-toggle="modal" data-target="#sequence_pchrgfp_primer_modal" class="journal-protocol"> Primers </a></strong>
                    <strong><a data-toggle="modal" data-target="#sequence_lanosterolsynthase_primer_modal" class="journal-protocol"> Primers </a></strong>
+
</p>
                </p>
+
</td>
            </td>
+
</tr>
        </tr>
+
  
        <!--Nasal Mucus Detection-->
+
<!--Fingerprint Ageing-->
        <tr>
+
<tr>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong><a href="http://parts.igem.org/Part:BBa_K1590007" target="_blank">BBa_K1590007</a></strong>
+
<strong><a href="http://parts.igem.org/Part:BBa_K1590006" target="_blank">BBa_K1590006</a></strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>Odorant Binding Protein 2A (Homo sapiens)</strong>
+
<strong>Lanosterol Synthase (Homo Sapiens)</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>Coding sequence for human odorant binding 2A protein in silico optimised for increased expression level in E. coli K12.</strong>
+
<strong>Coding sequence for Human lanosterol synthase in silico optimised for increased expression level in E. coli K12.</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>BioSpray - Nasal Mucus Detection</strong>
+
<strong>Fingerprint Ageing</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong><a data-toggle="modal" data-target="#sequence_odorantbindingprotein_modal" class="journal-protocol"> Fasta Sequence </a></strong>
+
<strong><a data-toggle="modal" data-target="#sequence_lanosterolsynthase_modal" class="journal-protocol"> Fasta Sequence </a></strong>
                </p>
+
</p>
                <p align="center">
+
<p align="center">
                    <strong><a data-toggle="modal" data-target="#sequence_odorantbindingprotein_primer_modal" class="journal-protocol"> Primers </a></strong>
+
<strong><a data-toggle="modal" data-target="#sequence_lanosterolsynthase_primer_modal" class="journal-protocol"> Primers </a></strong>
                </p>
+
</p>
            </td>            
+
</td>
        </tr>
+
</tr>
  
        <tr>
+
<!--Nasal Mucus Detection-->
            <td width="312" valign="top">
+
<tr>
                <p align="center">
+
<td width="312" valign="top">
                    <strong>-</strong>
+
<p align="center">
                </p>
+
<strong><a href="http://parts.igem.org/Part:BBa_K1590007" target="_blank">BBa_K1590007</a></strong>
            </td>
+
</p>
            <td width="312" valign="top">
+
</td>
                <p align="center">
+
<td width="312" valign="top">
                    <strong>Odorant Binding Protein (Homo sapiens) - Helix</strong>
+
<p align="center">
                </p>
+
<strong>Odorant Binding Protein 2A (Homo sapiens)</strong>
            </td>
+
</p>
            <td width="312" valign="top">
+
</td>
                <p align="center">
+
<td width="312" valign="top">
                    <strong>Coding sequence for C-terminal helix of human odorant binding protein.</strong>
+
<p align="center">
                </p>
+
<strong>Coding sequence for human odorant binding 2A protein in silico optimised for increased expression level in E. coli K12.</strong>
            </td>
+
</p>
            <td width="312" valign="top">
+
</td>
                <p align="center">
+
<td width="312" valign="top">
                    <strong>BioSpray - Nasal Mucus Detection</strong>
+
<p align="center">
                </p>
+
<strong>BioSpray - Nasal Mucus Detection</strong>
            </td>
+
</p>
            <td width="312" valign="top">
+
</td>
                <p align="center">
+
<td width="312" valign="top">
                    <strong><a data-toggle="modal" data-target="#sequence_obphelix_modal" class="journal-protocol"> Fasta Sequence </a></strong>
+
<p align="center">
                </p>
+
<strong><a data-toggle="modal" data-target="#sequence_odorantbindingprotein_modal" class="journal-protocol"> Fasta Sequence </a></strong>
                <p align="center">
+
</p>
                    <strong><a data-toggle="modal" data-target="#sequence_obphelix_primer_modal" class="journal-protocol"> Primers </a></strong>
+
<p align="center">
                </p>
+
<strong><a data-toggle="modal" data-target="#sequence_odorantbindingprotein_primer_modal" class="journal-protocol"> Primers </a></strong>
            </td>             
+
</p>
        </tr>
+
</td>             
 +
</tr>
  
        <tr>
+
<tr>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>-</strong>
+
<strong>-</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>Odorant Binding Protein (Homo sapiens) - Barrel</strong>
+
<strong>Odorant Binding Protein (Homo sapiens) - Helix</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>Coding sequence for N-terminal barrel of human odorant binding protein.</strong>
+
<strong>Coding sequence for C-terminal helix of human odorant binding protein.</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>BioSpray - Nasal Mucus Detection</strong>
+
<strong>BioSpray - Nasal Mucus Detection</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong><a data-toggle="modal" data-target="#sequence_obpbarrel_modal" class="journal-protocol"> Fasta Sequence </a></strong>
+
<strong><a data-toggle="modal" data-target="#sequence_obphelix_modal" class="journal-protocol"> Fasta Sequence </a></strong>
                </p>
+
</p>
                <p align="center">
+
<p align="center">
                    <strong><a data-toggle="modal" data-target="#sequence_obpbarrel_primer_modal" class="journal-protocol"> Primers </a></strong>
+
<strong><a data-toggle="modal" data-target="#sequence_obphelix_primer_modal" class="journal-protocol"> Primers </a></strong>
                </p>
+
</p>
            </td>             
+
</td>             
        </tr>
+
</tr>
  
        <!--Lactoferrin Binding Protein-->
+
<tr>
        <tr>
+
<td width="312" valign="top">
            <td width="312" valign="top">
+
<p align="center">
                <p align="center">
+
<strong>-</strong>
                    <strong><a href="http://parts.igem.org/Part:BBa_K1590008" target="_blank">BBa_K1590008</a></strong>
+
</p>
                </p>
+
</td>
            </td>
+
<td width="312" valign="top">
            <td width="312" valign="top">
+
<p align="center">
                <p align="center">
+
<strong>Odorant Binding Protein (Homo sapiens) - Barrel</strong>
                    <strong>Lactoferrin Binding Protein (Neisseria Meningitidis)</strong>
+
</p>
                </p>
+
</td>
            </td>
+
<td width="312" valign="top">
            <td width="312" valign="top">
+
<p align="center">
                <p align="center">
+
<strong>Coding sequence for N-terminal barrel of human odorant binding protein.</strong>
                    <strong>Coding sequence lactoferrin binding protein.</strong>
+
</p>
                </p>
+
</td>
            </td>
+
<td width="312" valign="top">
            <td width="312" valign="top">
+
<p align="center">
                <p align="center">
+
<strong>BioSpray - Nasal Mucus Detection</strong>
                    <strong>BioSpray - Saliva Detection</strong>
+
</p>
                </p>
+
</td>
            </td>
+
<td width="312" valign="top">
            <td width="312" valign="top">
+
<p align="center">
                <p align="center">
+
<strong><a data-toggle="modal" data-target="#sequence_obpbarrel_modal" class="journal-protocol"> Fasta Sequence </a></strong>
                    <strong><a data-toggle="modal" data-target="#sequence_lactoferrinbindingprotein_modal" class="journal-protocol"> Fasta Sequence </a></strong>
+
</p>
                </p>
+
<p align="center">
                <p align="center">
+
<strong><a data-toggle="modal" data-target="#sequence_obpbarrel_primer_modal" class="journal-protocol"> Primers </a></strong>
                    <strong><a data-toggle="modal" data-target="#sequence_lactoferrinbindingprotein_primer_modal" class="journal-protocol"> Primers </a></strong>
+
</p>
                </p>
+
</td>             
            </td>             
+
</tr>
        </tr>        
+
  
        <!--PotD-->
+
<!--Lactoferrin Binding Protein-->
        <tr>
+
<tr>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong><a href="http://parts.igem.org/Part:BBa_K1590009" target="_blank">BBa_K1590009</a></strong>
+
<strong><a href="http://parts.igem.org/Part:BBa_K1590008" target="_blank">BBa_K1590008</a></strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>PotD (Escherichia Coli)</strong>
+
<strong>Lactoferrin Binding Protein (Neisseria Meningitidis)</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>Unmodified coding sequence for E.coli Spermidine Binding Protein PotD.</strong>
+
<strong>Coding sequence lactoferrin binding protein.</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>BioSpray - Semen Detection</strong>
+
<strong>BioSpray - Saliva Detection</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong><a data-toggle="modal" data-target="#sequence_potd_modal" class="journal-protocol"> Fasta Sequence </a></strong>
+
<strong><a data-toggle="modal" data-target="#sequence_lactoferrinbindingprotein_modal" class="journal-protocol"> Fasta Sequence </a></strong>
                </p>
+
</p>
                <p align="center">
+
<p align="center">
                    <strong><a data-toggle="modal" data-target="#sequence_potd_primer_modal" class="journal-protocol"> Primers </a></strong>
+
<strong><a data-toggle="modal" data-target="#sequence_lactoferrinbindingprotein_primer_modal" class="journal-protocol"> Primers </a></strong>
                </p>
+
</p>
            </td>             
+
</td>             
        </tr>
+
</tr>        
  
        <!--Spermine Binding Protein-->
+
<!--PotD-->
        <tr>
+
<tr>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong><a href="http://parts.igem.org/Part:BBa_K1590010" target="_blank">BBa_K1590010</a></strong>
+
<strong><a href="http://parts.igem.org/Part:BBa_K1590009" target="_blank">BBa_K1590009</a></strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>Spermine Binding Protein (Mus Musculus)</strong>
+
<strong>PotD (Escherichia Coli)</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>Coding sequence for murine Spermine Binding Protein in silico optimised for increased expression level in E. coli K12.</strong>
+
<strong>Unmodified coding sequence for E.coli Spermidine Binding Protein PotD.</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong>BioSpray - Semen Detection</strong>
+
<strong>BioSpray - Semen Detection</strong>
                </p>
+
</p>
            </td>
+
</td>
            <td width="312" valign="top">
+
<td width="312" valign="top">
                <p align="center">
+
<p align="center">
                    <strong><a data-toggle="modal" data-target="#sequence_sperminebindingprotein_modal" class="journal-protocol"> Fasta Sequence </a></strong>
+
<strong><a data-toggle="modal" data-target="#sequence_potd_modal" class="journal-protocol"> Fasta Sequence </a></strong>
                </p>
+
</p>
                <p align="center">
+
<p align="center">
                    <strong><a data-toggle="modal" data-target="#sequence_sperminebindingprotein_primer_modal" class="journal-protocol"> Primers </a></strong>
+
<strong><a data-toggle="modal" data-target="#sequence_potd_primer_modal" class="journal-protocol"> Primers </a></strong>
                </p>
+
</p>
            </td>             
+
</td>             
        </tr>        
+
</tr>
  
 +
<!--Spermine Binding Protein-->
 +
<tr>
 +
<td width="312" valign="top">
 +
<p align="center">
 +
<strong><a href="http://parts.igem.org/Part:BBa_K1590010" target="_blank">BBa_K1590010</a></strong>
 +
</p>
 +
</td>
 +
<td width="312" valign="top">
 +
<p align="center">
 +
<strong>Spermine Binding Protein (Mus Musculus)</strong>
 +
</p>
 +
</td>
 +
<td width="312" valign="top">
 +
<p align="center">
 +
<strong>Coding sequence for murine Spermine Binding Protein in silico optimised for increased expression level in E. coli K12.</strong>
 +
</p>
 +
</td>
 +
<td width="312" valign="top">
 +
<p align="center">
 +
<strong>BioSpray - Semen Detection</strong>
 +
</p>
 +
</td>
 +
<td width="312" valign="top">
 +
<p align="center">
 +
<strong><a data-toggle="modal" data-target="#sequence_sperminebindingprotein_modal" class="journal-protocol"> Fasta Sequence </a></strong>
 +
</p>
 +
<p align="center">
 +
<strong><a data-toggle="modal" data-target="#sequence_sperminebindingprotein_primer_modal" class="journal-protocol"> Primers </a></strong>
 +
</p>
 +
</td>           
 +
</tr>       
 +
</body>
  
 
         </tbody></table></div>
 
         </tbody></table></div>

Revision as of 16:37, 7 September 2015

Dundee iGEM 2015

Sequences and Parts

Registry - ID

Name

Short Description

Part of which tool

Sequences

BBa_K1590000

Haemoglobin A (Homo sapiens)

Coding sequence for Human Haemoglobin A in silico optimised for increased expression level in E.coli K12.

BioSpray - Blood Detection

Fasta Sequence

Primers

BBa_K1590001

Haemoglobin B (Homo sapiens)

Coding sequence for Human Haemoglobin A in silico optimised for increased expression level in E.coli K12.

BioSpray - Blood Detection

Fasta Sequence

Primers

BBa_K1590002

Haptoglobin (Homo sapiens)

Coding sequence for Human Haemoglobin A in silico optimised for increased expression level in E.coli K12.

BioSpray - Blood Detection

Fasta Sequence

Primers

BBa_K1058008 (BIT-2013)

pChr-ChrB-GFP

Partial sequence of chromate resistance operon of Ochrobactrum tritici 5bvl1, containing a chromate-inducible promoter, pChr, a repressor, ChrB, and a fluorescen reporter, GFP.

Chromate Detection

Fasta Sequence

Primers

BBa_K1590003

pChr

Promoter sequence of chromate resistance operon of Ochrobactrum tritici 5bvl1.

Chromate Detection

Fasta Sequence

Primers

-

ChrB

Coding sequence for unmodified chromate sensitive repressor of pChr.

Chromate Detection

Fasta Sequence

Primers

BBa_K1590004

ChrBopt

Coding sequence for partially optimised chromate sensitive repressor of pChr.

Chromate Detection

Fasta Sequence

Primers

BBa_K1590005

pChrGFP

Sequence of fluorescent reporter-fusion, chromate sensitive promoter + GFP.

Chromate Detection

Fasta Sequence

Primers

BBa_K1590006

Lanosterol Synthase (Homo Sapiens)

Coding sequence for Human lanosterol synthase in silico optimised for increased expression level in E. coli K12.

Fingerprint Ageing

Fasta Sequence

Primers

BBa_K1590007

Odorant Binding Protein 2A (Homo sapiens)

Coding sequence for human odorant binding 2A protein in silico optimised for increased expression level in E. coli K12.

BioSpray - Nasal Mucus Detection

Fasta Sequence

Primers

-

Odorant Binding Protein (Homo sapiens) - Helix

Coding sequence for C-terminal helix of human odorant binding protein.

BioSpray - Nasal Mucus Detection

Fasta Sequence

Primers

-

Odorant Binding Protein (Homo sapiens) - Barrel

Coding sequence for N-terminal barrel of human odorant binding protein.

BioSpray - Nasal Mucus Detection

Fasta Sequence

Primers

BBa_K1590008

Lactoferrin Binding Protein (Neisseria Meningitidis)

Coding sequence lactoferrin binding protein.

BioSpray - Saliva Detection

Fasta Sequence

Primers

BBa_K1590009

PotD (Escherichia Coli)

Unmodified coding sequence for E.coli Spermidine Binding Protein PotD.

BioSpray - Semen Detection

Fasta Sequence

Primers

BBa_K1590010

Spermine Binding Protein (Mus Musculus)

Coding sequence for murine Spermine Binding Protein in silico optimised for increased expression level in E. coli K12.

BioSpray - Semen Detection

Fasta Sequence

Primers