Difference between revisions of "Team:Dundee/Sequences"

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<!-- Vectors -->
 
  <div class="row">
 
    <div class="border-week">
 
      <div class="box">
 
        <div class="labtitle">Vectors used throughout the project</div>
 
          <span type="button" class="chevron_toggleable box-btn glyphicon glyphicon-chevron-down" data-toggle="collapse" data-target="#collapsiblew7"></span>
 
          <div class="box-content">
 
                     
 
        </div>
 
        <div id="collapsiblew7" class="collapse week-content">
 
 
        <!-- when copying for next week, make sure to change labtitle, span, collapsible in last line. In each separate day change span and following div-->
 
 
 
 
 
      <div class="row">
 
        <div class="border-day">
 
          <div class="box">
 
            <span class="box-title"><a href="http://parts.igem.org/Part:pSB1C3" target="_blank">pSB1C3</a></span>
 
              <span type="button" class="chevron_toggleable box-btn glyphicon glyphicon-chevron-down" data-toggle="collapse" data-target="#collapsiblew7-1"></span>
 
                <div id="collapsiblew7-1" class="collapse box-content sequences">
 
 
                  <p></p>
 
 
                </div>
 
          </div>
 
        </div>
 
      </div>
 
 
 
      <div class="row">
 
        <div class="border-day">
 
          <div class="box">
 
            <span class="box-title">pQE-80L</span> <!--Title of collapsible box-->
 
              <span type="button" class="chevron_toggleable box-btn glyphicon glyphicon-chevron-down" data-toggle="collapse" data-target="#collapsiblew7-2"></span>
 
                <div id="collapsiblew7-2" class="collapse box-content sequences">
 
 
                  <p></p>
 
 
                </div>
 
          </div>
 
        </div>
 
      </div>
 
 
 
      <div class="row">
 
        <div class="border-day">
 
          <div class="box">
 
            <span class="box-title">pUT18</span> <!--Title of collapsible box-->
 
              <span type="button" class="chevron_toggleable box-btn glyphicon glyphicon-chevron-down" data-toggle="collapse" data-target="#collapsiblew7-3"></span>
 
                <div id="collapsiblew7-3" class="collapse box-content sequences">
 
 
                  <p></p>
 
 
                </div>
 
          </div>
 
        </div>
 
      </div>
 
 
 
      <div class="row">
 
        <div class="border-day">
 
          <div class="box">
 
            <span class="box-title">pT25</span> <!--Title of collapsible box-->
 
              <span type="button" class="chevron_toggleable box-btn glyphicon glyphicon-chevron-down" data-toggle="collapse" data-target="#collapsiblew7-4"></span>
 
                <div id="collapsiblew7-4" class="collapse box-content sequences">
 
 
                  <p></p>
 
 
                </div>
 
          </div>
 
        </div>
 
      </div>       
 
 
 
      <div class="row">
 
        <div class="border-day">
 
          <div class="box">
 
            <span class="box-title">pUniprom</span> <!--Title of collapsible box-->
 
              <span type="button" class="chevron_toggleable box-btn glyphicon glyphicon-chevron-down" data-toggle="collapse" data-target="#collapsiblew7-5"></span>
 
                <div id="collapsiblew7-5" class="collapse box-content sequences">
 
 
                  <p></p>
 
 
                </div>
 
          </div>
 
        </div>
 
      </div>
 
 
 
        </div>
 
      </div>
 
    </div>
 
  </div>
 
 
  
  

Revision as of 17:27, 7 September 2015

Dundee iGEM 2015

Sequences and Parts

Registry - ID

Name

Short Description

Part of which tool

Sequences

BBa_K1590000

Haemoglobin A (Homo sapiens)

Coding sequence for Human Haemoglobin A in silico optimised for increased expression level in E.coli K12.

BioSpray - Blood Detection

Fasta Sequence

Primers

BBa_K1590001

Haemoglobin B (Homo sapiens)

Coding sequence for Human Haemoglobin A in silico optimised for increased expression level in E.coli K12.

BioSpray - Blood Detection

Fasta Sequence

Primers

BBa_K1590002

Haptoglobin (Homo sapiens)

Coding sequence for Human Haemoglobin A in silico optimised for increased expression level in E.coli K12.

BioSpray - Blood Detection

Fasta Sequence

Primers

BBa_K1058008 (BIT-2013)

pChr-ChrB-GFP

Partial sequence of chromate resistance operon of Ochrobactrum tritici 5bvl1, containing a chromate-inducible promoter, pChr, a repressor, ChrB, and a fluorescen reporter, GFP.

Chromate Detection

Fasta Sequence

Primers

BBa_K1590003

pChr

Promoter sequence of chromate resistance operon of Ochrobactrum tritici 5bvl1.

Chromate Detection

Fasta Sequence

Primers

-

ChrB

Coding sequence for unmodified chromate sensitive repressor of pChr.

Chromate Detection

Fasta Sequence

Primers

BBa_K1590004

ChrBopt

Coding sequence for partially optimised chromate sensitive repressor of pChr.

Chromate Detection

Fasta Sequence

Primers

BBa_K1590005

pChrGFP

Sequence of fluorescent reporter-fusion, chromate sensitive promoter + GFP.

Chromate Detection

Fasta Sequence

Primers

BBa_K1590006

Lanosterol Synthase (Homo Sapiens)

Coding sequence for Human lanosterol synthase in silico optimised for increased expression level in E. coli K12.

Fingerprint Ageing

Fasta Sequence

Primers

BBa_K1590007

Odorant Binding Protein 2A (Homo sapiens)

Coding sequence for human odorant binding 2A protein in silico optimised for increased expression level in E. coli K12.

BioSpray - Nasal Mucus Detection

Fasta Sequence

Primers

-

Odorant Binding Protein (Homo sapiens) - Helix

Coding sequence for C-terminal helix of human odorant binding protein.

BioSpray - Nasal Mucus Detection

Fasta Sequence

Primers

-

Odorant Binding Protein (Homo sapiens) - Barrel

Coding sequence for N-terminal barrel of human odorant binding protein.

BioSpray - Nasal Mucus Detection

Fasta Sequence

Primers

BBa_K1590008

Lactoferrin Binding Protein (Neisseria Meningitidis)

Coding sequence lactoferrin binding protein.

BioSpray - Saliva Detection

Fasta Sequence

Primers

BBa_K1590009

PotD (Escherichia Coli)

Unmodified coding sequence for E.coli Spermidine Binding Protein PotD.

BioSpray - Semen Detection

Fasta Sequence

Primers

BBa_K1590010

Spermine Binding Protein (Mus Musculus)

Coding sequence for murine Spermine Binding Protein in silico optimised for increased expression level in E. coli K12.

BioSpray - Semen Detection

Fasta Sequence

Primers