Difference between revisions of "Team:SPSingapore/Notebook-Week-4"

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<center>
 
<center>
 
<table style = "width:750px; border-collapse: collapse;">
 
<table style = "width:750px; border-collapse: collapse;">
 +
 
<tr class = "tablenotebook"><td><p class = "paper">
 
<tr class = "tablenotebook"><td><p class = "paper">
<u>May 25</u>
+
May 25
 
<br><br>
 
<br><br>
<strong>[Yi Han]</strong>
+
<font style = "color:blue;font-weight:bold;font-size:11pt;">&#9728; Yi Han &#9728;</font>
 
<br><br>
 
<br><br>
&bull; Received 2 bacterial stab cultures, EsaR/I plasmid from addgene (CHL) and BBa_K299812 from iGEM HQ.
+
&#10097;&#10097;&#10097; Received 2 bacterial stab cultures, EsaR/I plasmid from addgene (CHL) and BBa_K299812 from iGEM HQ.
 
<br>
 
<br>
&bull; Streaked out on plates with amp.
+
&#10097;&#10097;&#10097; Streaked out on plates with amp.
 
<br><br>
 
<br><br>
 
</p>
 
</p>
 +
<div style = "border-top: 2px solid turquoise;"></div>
 
</td>
 
</td>
 
</tr>
 
</tr>
  
<tr><td><div style = "border-top: 2px solid turquoise;"></div></td></tr>
 
  
 
<tr class = "tablenotebook"><td><p class = "paper">
 
<tr class = "tablenotebook"><td><p class = "paper">
 
May 26
 
May 26
 
<br><br>
 
<br><br>
<strong>Adrian</strong>
+
<font style = "color:blue;font-weight:bold;font-size:11pt;">&#9728; Adrian &#9728;</font>
 
<br><br>
 
<br><br>
&bull; Transformed:<br>
+
&#10097;&#10097;&#10097; Transformed:<br>
 
&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;+Kit plate 1 9N Ba_K763002 chl<br>
 
&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;+Kit plate 1 9N Ba_K763002 chl<br>
 
&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;+Kit plate 4 13L BBa_E0040 amp
 
&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;+Kit plate 4 13L BBa_E0040 amp
 
<br>
 
<br>
&bull; DNa was received in powder form in plates, and resuspended in 10ul ultrapure H2O respectively. Plates were stored in -20/
+
&#10097;&#10097;&#10097; DNa was received in powder form in plates, and resuspended in 10ul ultrapure H2O respectively. Plates were stored in -20/
 
<br><br>
 
<br><br>
<strong>Yi Han</strong>
+
<font style = "color:blue;font-weight:bold;font-size:11pt;">&#9728; Yi Han &#9728;</font>
 
<br><br>
 
<br><br>
&bull; Plates cracked in incubator as they dried from lack of humidity.
+
&#10097;&#10097;&#10097; Plates cracked in incubator as they dried from lack of humidity.
 
<br>
 
<br>
&bull; Transfer to small incubator with beaker of water for humidity no single colonies for inv plasmid -> streak again.
+
&#10097;&#10097;&#10097; Transfer to small incubator with beaker of water for humidity no single colonies for inv plasmid -> streak again.
 
<br>
 
<br>
&bull; Wrong antibiotic for EsaR/I plasmid &rarr; streak out again
+
&#10097;&#10097;&#10097; Wrong antibiotic for EsaR/I plasmid &rarr; streak out again
 +
<br><br>
 
</p>
 
</p>
 +
<div style = "border-top: 2px solid turquoise;"></div>
 
</td>
 
</td>
 
</tr>
 
</tr>
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May 28
 
May 28
 
<br><br>
 
<br><br>
<strong>Yi Han</strong>
+
<font style = "color:blue;font-weight:bold;font-size:11pt;">&#9728; Yi Han &#9728;</font>
 
<br><br>
 
<br><br>
&bull; Inoculate single colony of invasin plasmid carrying bacteria in 3mL LB+amp
+
&#10097;&#10097;&#10097; Inoculate single colony of invasin plasmid carrying bacteria in 3mL LB+amp
 
<br>
 
<br>
&bull; Transformation of 13L repeated with 1ul of DNA.
+
&#10097;&#10097;&#10097; Transformation of 13L repeated with 1ul of DNA.
 
</p>
 
</p>
 +
<br><br>
 +
<div style = "border-top: 2px solid turquoise;"></div>
 
</td>
 
</td>
 
</tr>
 
</tr>
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May 29
 
May 29
 
<br><br>
 
<br><br>
<strong>Xin Yi</strong>
+
<font style = "color:blue;font-weight:bold;font-size:11pt;">&#9728; Xin Yi &#9728;</font>
 
<br><br>
 
<br><br>
&bull; No colonies grew for 13L on all plates &rarr; adjust incubator, make new media
+
&#10097;&#10097;&#10097; No colonies grew for 13L on all plates &rarr; adjust incubator, make new media
 
<br>
 
<br>
&bull; Miniprep of inoculated bacteria for invasin plasmid, incubate sample in 37degC for 1h 20min:
+
&#10097;&#10097;&#10097; Miniprep of inoculated bacteria for invasin plasmid, incubate sample in 37degC for 1h 20min:
 
<br><br>
 
<br><br>
 
<div>
 
<div>
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</div>
 
</div>
 
<br>
 
<br>
<div class = "nbafter">&bull; Repeat transformation of 13L with 1ul</div>
+
<div class = "nbafter">&#10097;&#10097;&#10097; Repeat transformation of 13L with 1ul</div>
 
<br><br>
 
<br><br>
 
</p>
 
</p>
 +
<div style = "border-top: 2px solid turquoise;"></div>
 
</td>
 
</td>
 
</tr>
 
</tr>
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May 30
 
May 30
 
<br><br>
 
<br><br>
<strong>Xin Yi & Yi Han</strong>
+
<font style = "color:blue;font-weight:bold;font-size:11pt;">&#9728; Xin Yi & Yi Han &#9728;</font>
 
<br><br>
 
<br><br>
&bull; Miniprep of EsaR/I plasmid for 4 colonies
+
&#10097;&#10097;&#10097; Miniprep of EsaR/I plasmid for 4 colonies
<br>
+
&bull; Restriction digest for EsaR with XbaI/BamHI:
+
 
<br><br>
 
<br><br>
<div>
+
&#10097;&#10097;&#10097; Restriction digest for EsaR with XbaI/BamHI:
<center>
+
<br><br>
<table class = "nbtable">
+
<span>
<tr><td><b>RE reaction</b></td></tr>
+
<b><u>RE reaction</u></b><br>
<tr><td>5ul plasmid</td></tr>
+
5ul plasmid<br>5ul buffer<br>1ul XbaI<br>1ul BamHI<br>Add H2O to 50ul
<tr><td>5ul buffer</td></tr>
+
</span>
<tr><td>1ul XbaI</td></tr>
+
<tr><td>1ul BamHI</td></tr>
+
<tr><td>Add H2O to 50ul</td></tr>
+
</table></center>
+
</div>
+
 
<br><br>
 
<br><br>
 
</p>
 
</p>

Revision as of 17:12, 13 September 2015


Research Notebook

Week 1 (24/5 - 30/5)

May 25

☀ Yi Han ☀

❱❱❱ Received 2 bacterial stab cultures, EsaR/I plasmid from addgene (CHL) and BBa_K299812 from iGEM HQ.
❱❱❱ Streaked out on plates with amp.

May 26

☀ Adrian ☀

❱❱❱ Transformed:
      +Kit plate 1 9N Ba_K763002 chl
      +Kit plate 4 13L BBa_E0040 amp
❱❱❱ DNa was received in powder form in plates, and resuspended in 10ul ultrapure H2O respectively. Plates were stored in -20/

☀ Yi Han ☀

❱❱❱ Plates cracked in incubator as they dried from lack of humidity.
❱❱❱ Transfer to small incubator with beaker of water for humidity no single colonies for inv plasmid -> streak again.
❱❱❱ Wrong antibiotic for EsaR/I plasmid → streak out again

May 28

☀ Yi Han ☀

❱❱❱ Inoculate single colony of invasin plasmid carrying bacteria in 3mL LB+amp
❱❱❱ Transformation of 13L repeated with 1ul of DNA.



May 29

☀ Xin Yi ☀

❱❱❱ No colonies grew for 13L on all plates → adjust incubator, make new media
❱❱❱ Miniprep of inoculated bacteria for invasin plasmid, incubate sample in 37degC for 1h 20min:

RE of invasin plasmid RE control
Rsal 1ul Rsal 0 ul
EcoRI 1 ul EcoRI 0 ul
INv plasmid 7.5ul Inv plasmid 7.5 ul
H2O 35.5 ul H2O 37.5 ul
NEB buffer 4.5 ul Buffer 4.5 ul

❱❱❱ Repeat transformation of 13L with 1ul


May 30

☀ Xin Yi & Yi Han ☀

❱❱❱ Miniprep of EsaR/I plasmid for 4 colonies

❱❱❱ Restriction digest for EsaR with XbaI/BamHI:

RE reaction
5ul plasmid
5ul buffer
1ul XbaI
1ul BamHI
Add H2O to 50ul