Difference between revisions of "Team:UCSC/Project"

 
(21 intermediate revisions by 2 users not shown)
Line 13: Line 13:
 
.navbar-nav > li{
 
.navbar-nav > li{
 
   padding-top: 5px;
 
   padding-top: 5px;
   padding-left:30px;
+
   padding-left:15px;
   padding-right:30px;
+
   padding-right:20px;
 
}
 
}
  
Line 73: Line 73:
  
 
p {margin-left: 20px;
 
p {margin-left: 20px;
 +
font-family: calibri, helvetica, arial;
 +
font-size: 16px;}
 +
 +
ol
 +
{margin-left: 20px;
 
font-family: calibri, helvetica, arial;
 
font-family: calibri, helvetica, arial;
 
font-size: 16px;}
 
font-size: 16px;}
Line 118: Line 123:
  
 
@media screen and (max-width: 1280px) {
 
@media screen and (max-width: 1280px) {
 +
 +
.gear {width: 10%; height: 10%;}
  
 
#salt {width: 100%}
 
#salt {width: 100%}
Line 152: Line 159:
 
#foot {width: 100%}
 
#foot {width: 100%}
  
 
+
.gear {width: 10%; height: 10%;}
  
 
}
 
}
Line 170: Line 177:
 
#foot {width: 100%}
 
#foot {width: 100%}
  
.gear {width: 25%;}
+
.gear {width: 10%; height: 10%;}
 
}
 
}
  
Line 189: Line 196:
 
#foot {width: 100%}
 
#foot {width: 100%}
  
 +
.gear {width: 10%; height: 10%;}
  
 
}
 
}
Line 215: Line 223:
 
         <li class="dropdown"><a class="dropdown-toggle" data-toggle="dropdown" href="#">Team <span class="caret"></span></a>
 
         <li class="dropdown"><a class="dropdown-toggle" data-toggle="dropdown" href="#">Team <span class="caret"></span></a>
 
           <ul class="dropdown-menu">
 
           <ul class="dropdown-menu">
             <li><a href="https://2015.igem.org/Team:UCSC/Captains">The Captains</a></li>
+
             <li><a href="https://2015.igem.org/Team:UCSC/Team">Meet the Team</a></li>
 
             <li><a href="https://2015.igem.org/Team:UCSC/Breakdown">Breakdown</a></li>
 
             <li><a href="https://2015.igem.org/Team:UCSC/Breakdown">Breakdown</a></li>
 
             <li><a href="https://2015.igem.org/Team:UCSC/Fermentation">Fermentation</a></li>
 
             <li><a href="https://2015.igem.org/Team:UCSC/Fermentation">Fermentation</a></li>
Line 222: Line 230:
 
         </li>
 
         </li>
 
         <li  class="active"><a href="https://2015.igem.org/Team:UCSC/Project">Project</a></li>
 
         <li  class="active"><a href="https://2015.igem.org/Team:UCSC/Project">Project</a></li>
        <li><a href="https://2015.igem.org/Team:UCSC/Outreach">Outreach</a></li>
+
          <li class="dropdown"><a class="dropdown-toggle" data-toggle="dropdown" href="#">Human Practices<span class="caret"></span></a>
         <li class="dropdown"><a class="dropdown-toggle" data-toggle="dropdown" href="#">Notebook<span class="caret"></span></a>
+
          <ul class="dropdown-menu">
 +
            <li><a href="https://2015.igem.org/Team:UCSC/Outreach">Outreach</a></li>
 +
            <li><a href="https://2015.igem.org/Team:UCSC/Bioethics">Bioethics</a></li>
 +
          </ul>
 +
         </li>        <li class="dropdown"><a class="dropdown-toggle" data-toggle="dropdown" href="#">Notebook<span class="caret"></span></a>
 
           <ul class="dropdown-menu">
 
           <ul class="dropdown-menu">
 
             <li><a href="https://2015.igem.org/Team:UCSC/Logs">Logs</a></li>
 
             <li><a href="https://2015.igem.org/Team:UCSC/Logs">Logs</a></li>
Line 230: Line 242:
 
         </li>
 
         </li>
 
         <li><a href="https://2015.igem.org/Team:UCSC/Safety">Safety</a></li>
 
         <li><a href="https://2015.igem.org/Team:UCSC/Safety">Safety</a></li>
        <li><a href="https://2015.igem.org/Team:UCSC/Parts">Parts</a></li>
+
<li class="dropdown"><a class="dropdown-toggle" data-toggle="dropdown" href="#">Achievements<span class="caret"></span></a>
        <li class="dropdown"><a class="dropdown-toggle" data-toggle="dropdown" href="#">F.O.C.U.S<span class="caret"></span></a>
+
 
           <ul class="dropdown-menu">
 
           <ul class="dropdown-menu">
             <li><a href="https://2015.igem.org/Team:UCSC/FOCUS_Works">How it works</a></li>
+
             <li><a href="https://2015.igem.org/Team:UCSC/Parts">Parts</a></li>
             <li><a href="https://2015.igem.org/Team:UCSC/FOCUS_Devs">Developers</a></li>
+
             <li><a href="https://2015.igem.org/Team:UCSC/Medal Fulfillment">Medal Fulfillment</a></li>
 +
            <li><a href="https://2015.igem.org/Team:UCSC/Results">Results</a></li>
 +
</ul>
 +
            <li><a href="https://2015.igem.org/Team:UCSC/Software">Software</a></li>
 
              
 
              
 
       </ul>
 
       </ul>
Line 251: Line 265:
  
  
Continued usage of petroleum-based fuels has resulted in increased amounts of pollution due to their prolonged carbon chain. We hope to solve this problem by engineering a micro-organism to improve biofuel production. Haloferax Volcanii has a high tolerance for extreme salt environments and it would be ideal for a coupled pathway involving fermentation and deconstruction processes. We hope to improve the efficiency of this process and create a more sustainable method of bio-butanol production.
+
Continued usage of petroleum-based fuels has resulted in increased amounts of pollution due to their prolonged carbon chain. We hope to solve this problem by engineering a micro-organism to improve biofuel production. <i>Haloferax volcanii</i> has a high tolerance for extreme salt environments and it would be ideal for a coupled pathway involving fermentation and deconstruction processes. We hope to improve the efficiency of this process and create a more sustainable method of bio-butanol production.
  
+
</p>
  
 
+
<p class="center">
The red and blue arrows represent the current carbon cycles
+
<br />
 
+
<img src="https://static.igem.org/mediawiki/2015/3/33/UCSC_infographics.png" />
The green arrows depicts the shortened carbon cycle by producing butanol from plant waste.
+
<br />
 +
The <span style="color:red;">red</span> and <span style="color: #dfc700;"> yellow</span> arrows represent the current carbon cycles.
 +
<br />
 +
<br />
 +
The <span style="color: #2db900;">green</span> arrows depicts the shortened carbon cycle by producing butanol from plant waste.
 
</p>
 
</p>
 
   
 
   
Line 270: Line 288:
 
<h2>What is the significance of this project?</h2>
 
<h2>What is the significance of this project?</h2>
 
<p style="text-align: left;">
 
<p style="text-align: left;">
In the short term, using H.Volcanii, a robust high-salt organism, is beneficial to the future of biofuel production since it will not die post production like most other organisms, it is easier to work with pre processing, and thus creates a sustainable and carbon neutral process. Most biofuel companies spend tons of money and effort on working with more difficult organisms like
+
In the short term, using <i>H.Volcanii</i>, a robust high-salt organism, is beneficial to the future of biofuel production since it will not die post production like most other organisms, it is easier to work with pre processing, and thus creates a sustainable and carbon neutral process. Most biofuel companies spend tons of money and effort on working with more difficult organisms like
  
 
The long term effect is that our work could have the effect of reducing the cost of biofuel, and stopping carbon pollution. Our project will also have the effect of reducing the world's dependance on fossil fuels.
 
The long term effect is that our work could have the effect of reducing the cost of biofuel, and stopping carbon pollution. Our project will also have the effect of reducing the world's dependance on fossil fuels.
Line 277: Line 295:
 
<h2>What are the goals of the project? </h2>
 
<h2>What are the goals of the project? </h2>
 
<p style="text-align: left;">
 
<p style="text-align: left;">
  We aim to engineer the halophilic archaean, H. volcanii to effectively convert organic waste into an effective biofuel.  
+
  We aim to engineer the halophilic archaean, <i>H. volcanii</i> to effectively convert organic waste into an effective biofuel.  
 
<ol style="text-align: left;">
 
<ol style="text-align: left;">
<li> H. volcanii has the possibility of building butanol using its natural fatty acid synthesis pathway. The team will be finding gene analogs from Clostridium in halophiles and inserting them into H. volcanii. </li>
+
<li> <i>H. volcanii</i> has the possibility of building butanol using its natural fatty acid synthesis pathway. The team will be finding gene analogs from Clostridium in halophiles and inserting them into <i>H. volcanii</i>. </li>
  
<li> We will improve H. volcanii's cellulose breakdown using a modified cellulase and knocking out certain genes. The products will be used in the glucose to butanol pathway. </li>
+
<li> We will improve <i>H. volcanii's</i> cellulose breakdown using a modified cellulase and knocking out certain genes. The products will be used in the glucose to butanol pathway. </li>
  
 
<li> We will be looking for a new bacterial species that is capable of breaking down cellulose very well via field research in the salt flats or to a natural reserve. </li>
 
<li> We will be looking for a new bacterial species that is capable of breaking down cellulose very well via field research in the salt flats or to a natural reserve. </li>
Line 301: Line 319:
 
<br />
 
<br />
 
<br />
 
<br />
<table class="center">
+
 
<tr>
+
    <td><a href="#"><img src="https://static.igem.org/mediawiki/2015/3/3c/Ucsc_sustainability.jpg" width="350" height="200"></a></td>
+
    <td><img src="https://static.igem.org/mediawiki/2015/4/41/Sammythumbsup.png" width="350" height="300"></a></td>
+
    <td><a href="https://2015.igem.org/Team:UCSC/Outreach"><img src="https://static.igem.org/mediawiki/2015/3/32/Ucsc_outreach.jpg" width="350" height="200"></a></td>
+
  </tr>
+
</table>
+
 
</nav>
 
</nav>
  
Line 323: Line 335:
  
 
<div id="foot" class="center foot">
 
<div id="foot" class="center foot">
<img src="https://static.igem.org/mediawiki/2015/8/80/Cellulose_Footer.png" width="25%" /><img class="gear" src="https://static.igem.org/mediawiki/2015/1/11/Ucsc_gear.png" alt="">&nbsp;&nbsp; <a href="https://2015.igem.org/Team:UCSC">Home</a> | <a href="https://2015.igem.org/Team:UCSC/Team">Teams</a> | <a href="https://2015.igem.org/Team:UCSC/Project">Project</a> | <a href="https://2015.igem.org/Team:UCSC/Outreach">Outreach</a> | <a href="https://2015.igem.org/Team:UCSC/Notebook">Notebook</a> | <a href="https://2015.igem.org/Team:UCSC/Safety">Safety</a> | <a href="https://2015.igem.org/Team:UCSC/Parts">Parts</a> | <a href="https://2015.igem.org/Team:UCSC/Software">F.O.C.U.S</a> &nbsp;&nbsp; <img class="gear" src="https://static.igem.org/mediawiki/2015/1/11/Ucsc_gear.png" alt="">
+
<img src="https://static.igem.org/mediawiki/2015/8/80/Cellulose_Footer.png" width="20%" /><img class="gear" src="https://static.igem.org/mediawiki/2015/1/11/Ucsc_gear.png" alt="">&nbsp;&nbsp; <a href="https://2015.igem.org/Team:UCSC">Home</a> | <a href="https://2015.igem.org/Team:UCSC/Team">Teams</a> | <a href="https://2015.igem.org/Team:UCSC/Project">Project</a> | <a href="https://2015.igem.org/Team:UCSC/Outreach">Human Practices</a> | <a href="https://2015.igem.org/Team:UCSC/Logs">Notebook</a> | <a href="https://2015.igem.org/Team:UCSC/Safety">Safety</a> | <a href="https://2015.igem.org/Team:UCSC/Parts">Achievements</a> | <a href="https://2015.igem.org/Team:UCSC/Software">F.O.C.U.S</a> &nbsp;&nbsp; <img class="gear" src="https://static.igem.org/mediawiki/2015/1/11/Ucsc_gear.png" alt="">
<img src="https://static.igem.org/mediawiki/2015/4/4c/Fuel_Footer.png"  width="25%"/>
+
<img src="https://static.igem.org/mediawiki/2015/4/4c/Fuel_Footer.png"  width="20%"/>
  
 
<ul id="menu">
 
<ul id="menu">
<li><img src="https://static.igem.org/mediawiki/2015/a/a9/Fns4kg.png" style="width: 148px; height:148px;" /></li>
+
<li><img src="https://static.igem.org/mediawiki/2015/a/a9/Fns4kg.png" style="width: 88px; height:88px;" /></li>
  
<li><img src="https://static.igem.org/mediawiki/2015/0/03/Vwr.png" /></li>
+
<li><img src="https://static.igem.org/mediawiki/2015/0/03/Vwr.png" style="width: 241px; height: 50px "/></li>
  
<li><img src="https://static.igem.org/mediawiki/2015/6/62/Ucsc.png" style="width: 348px; height: 98px;" /></li>
+
<li><img src="https://static.igem.org/mediawiki/2015/6/62/Ucsc.png" style="width: 288px; height: 68px;" /></li>
  
<li><img src="https://static.igem.org/mediawiki/2015/b/b6/Geneious_logo.png" style="width: 348px; height: 148px; " /></li>
+
<li><img src="https://static.igem.org/mediawiki/2015/b/b6/Geneious_logo.png" style="width: 288px; height: 88px; " /></li>
  
<li><img src="https://static.igem.org/mediawiki/2015/3/34/Idt.jpg" style="width: 148px; height: 148px;" /></li>
+
<li><img src="https://static.igem.org/mediawiki/2015/3/34/Idt.jpg" style="width: 88px; height: 88px;" /></li>
  
 
</ul>
 
</ul>
  
</div>
+
</div></body>
</body>
+
  
 
</html>
 
</html>

Latest revision as of 22:01, 16 September 2015

About This Project

Continued usage of petroleum-based fuels has resulted in increased amounts of pollution due to their prolonged carbon chain. We hope to solve this problem by engineering a micro-organism to improve biofuel production. Haloferax volcanii has a high tolerance for extreme salt environments and it would be ideal for a coupled pathway involving fermentation and deconstruction processes. We hope to improve the efficiency of this process and create a more sustainable method of bio-butanol production.



The red and yellow arrows represent the current carbon cycles.

The green arrows depicts the shortened carbon cycle by producing butanol from plant waste.

What is the context of this research?

Current sources of energy depend on fossil fuels, which contribute excess CO2 to the atmosphere. We can shorten the carbon cycle and stop adding to this accumulation of greenhouse gases. Biofuel will still emit CO2 but won't add new carbon into the climate. Biofuel's carbon comes from plants instead of fossil fuels. Ethanol has low energy content and water absorption compared to butanol. Butanol provides comparable amounts of energy to gasoline, can be used in current infrastructure, burns substantially cleaner, but is difficult to produce conventionally and remains expensive. Using the cellulose from food waste products like almond husks and apple cores would be a good way to cheapen the cost of production.

What is the significance of this project?

In the short term, using H.Volcanii, a robust high-salt organism, is beneficial to the future of biofuel production since it will not die post production like most other organisms, it is easier to work with pre processing, and thus creates a sustainable and carbon neutral process. Most biofuel companies spend tons of money and effort on working with more difficult organisms like The long term effect is that our work could have the effect of reducing the cost of biofuel, and stopping carbon pollution. Our project will also have the effect of reducing the world's dependance on fossil fuels.

What are the goals of the project?

We aim to engineer the halophilic archaean, H. volcanii to effectively convert organic waste into an effective biofuel.

  1. H. volcanii has the possibility of building butanol using its natural fatty acid synthesis pathway. The team will be finding gene analogs from Clostridium in halophiles and inserting them into H. volcanii.
  2. We will improve H. volcanii's cellulose breakdown using a modified cellulase and knocking out certain genes. The products will be used in the glucose to butanol pathway.
  3. We will be looking for a new bacterial species that is capable of breaking down cellulose very well via field research in the salt flats or to a natural reserve.