Difference between revisions of "Team:Berlin/Project"

 
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             <strong>
 
               This year’s iGEM project of the Berlin team is all about plastic -  
 
               This year’s iGEM project of the Berlin team is all about plastic -  
 
             to be specific: microplastic and the clearance of our water with the aid of Synthetic Biology.<br/>
 
             to be specific: microplastic and the clearance of our water with the aid of Synthetic Biology.<br/>
 
               The idea is to build a modular filter system for wastewater treatment plants which is able to degrade plastic.
 
               The idea is to build a modular filter system for wastewater treatment plants which is able to degrade plastic.
 
                 Bacterial flagella, moleculare hair-like structures, are equipped with a combination of enzymes  
 
                 Bacterial flagella, moleculare hair-like structures, are equipped with a combination of enzymes  
               that are able to breakdown plastic molecules.
+
               that are able to breakdown plastic molecules. </strong>
 
               <br/><br/><br><br/>
 
               <br/><br/><br><br/>
 
             </div>
 
             </div>
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        <a href="https://2015.igem.org/Team:Berlin/Project/Implementation" class="sub-link-project">4. Implementation of our Product</a><br/><br/>
 
        <a href="https://2015.igem.org/Team:Berlin/Project/Implementation" class="sub-link-project">4. Implementation of our Product</a><br/><br/>
 
        <a href="https://2015.igem.org/Team:Berlin/Project/property" class="sub-link-project">5. Properties of Enzymatic Flagellulose</a><br/><br/>
 
        <a href="https://2015.igem.org/Team:Berlin/Project/property" class="sub-link-project">5. Properties of Enzymatic Flagellulose</a><br/><br/>
        <a href="https://2015.igem.org/Team:Berlin/Project/results" class="sub-link-project">6.Results</a><br/><br/>
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        <a href="https://2015.igem.org/Team:Berlin/Project/results" class="sub-link-project">6. Results</a><br/><br/>
 +
<a href="https://2015.igem.org/Team:Berlin/Modeling" class="sub-link-project">7. Modeling</a><br/><br/>
 
      <br/>
 
      <br/>
 
      </div>
 
      </div>
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      <div class="project-headline-float">
 
      <div class="project-headline-float">
      <h4 class="blue-text project-headline"><font face="Comic Sans Ms">1. What's the   problem?</h4></font>
+
      <h4 class="blue-text project-headline"><FONT FACE="Arial">1. What's the problem?</h4></FONT>
 
      </div>
 
      </div>
 
 
 
      <p>     
 
      <p>     
 
        <a name="description">&nbsp;</a>
 
        <a name="description">&nbsp;</a>
          <strong>Plastic is an environmentally harmful organic polymer that is present everywhere. The  
+
Plastic is an environmentally harmful organic polymer that is present everywhere. The  
 
+
 
production of plastic material often results in the release of CO2, which exacerbates the  
 
production of plastic material often results in the release of CO2, which exacerbates the  
 
 
Greenhouse effect. Within the last five decades, global plastic consumption rose from 5 to 100  
 
Greenhouse effect. Within the last five decades, global plastic consumption rose from 5 to 100  
 
+
million tons per year.<strong>[1]</strong><br/><br/> Most of this consumption is completely unnecessary and a waste of  
million tons per year.[1] Most of this consumption is completely unnecessary and a waste of  
+
 
+
 
valuable resources, such as the 600 billion plastic bags that are being redundantly produced  
 
valuable resources, such as the 600 billion plastic bags that are being redundantly produced  
 
 
annually. Additionally, there is no integrated solid waste management, meaning that plastic  
 
annually. Additionally, there is no integrated solid waste management, meaning that plastic  
 
 
waste is neither collected properly nor disposed of in an appropriate manner to avoid the  
 
waste is neither collected properly nor disposed of in an appropriate manner to avoid the  
 
 
negative impacts on the environment and public health. A good example of this is that out of the  
 
negative impacts on the environment and public health. A good example of this is that out of the  
 
+
produced 14 million tons of Styrofoam only 1% is recycled every year!<strong>[2] </strong><br/><br/>
produced 14 million tons of Styrofoam only 1% is recycled every year![2]  
+
 
+
 
The massive amount of plastic waste that remains unrecycled partly ends up in the oceans.  
 
The massive amount of plastic waste that remains unrecycled partly ends up in the oceans.  
 
 
There, it accumulates through two underwater vortexes. One of these plastic accumulations is as  
 
There, it accumulates through two underwater vortexes. One of these plastic accumulations is as  
 
 
big as central Europe and is called “Great Pacific Garbage Patch.” The main problem with this is  
 
big as central Europe and is called “Great Pacific Garbage Patch.” The main problem with this is  
 
 
that plastic cannot be degraded like natural resources. It is very durable and its decomposition  
 
that plastic cannot be degraded like natural resources. It is very durable and its decomposition  
 
+
can take up to 1000 years.<strong>[3]</strong> <br/><br/>
can take up to 1000 years.[3]  
+
 
+
 
Plastics can be divided into macro- (> 5 mm in diameter) and microplastics (≤ 5 mm in  
 
Plastics can be divided into macro- (> 5 mm in diameter) and microplastics (≤ 5 mm in  
 
 
diameter), each of which require different approaches for applications. Macroplastics can be  
 
diameter), each of which require different approaches for applications. Macroplastics can be  
 
 
found in plastic bags, bottles, car materials, etc. Microplastics, on the other hand, are present in  
 
found in plastic bags, bottles, car materials, etc. Microplastics, on the other hand, are present in  
 
 
various everyday products, like peelings and creams, and find their way into the wastewater  
 
various everyday products, like peelings and creams, and find their way into the wastewater  
 
 
treatment plants through bathroom drains, and house and industrial sewage.   
 
treatment plants through bathroom drains, and house and industrial sewage.   
 
 
Research is already underway to develop some new techniques to convert macroplastics into  
 
Research is already underway to develop some new techniques to convert macroplastics into  
 
 
fuels without harming the environment. This offers a very promising approach, as the plastic can  
 
fuels without harming the environment. This offers a very promising approach, as the plastic can  
 
+
serve for the production of resources that are in high demand.<strong>[4]</strong><br/><br/> As for  
serve for the production of resources that are in high demand.[4] As for  
+
 
+
 
treating microplastics, iGEM Berlin 2015 is constructing a modular filtering machine which can  
 
treating microplastics, iGEM Berlin 2015 is constructing a modular filtering machine which can  
 
 
be applied in wastewater treatment plants to degrade microplastics in biodegradable  
 
be applied in wastewater treatment plants to degrade microplastics in biodegradable  
 
 
compounds.   
 
compounds.   
 
 
   
 
   
  
 
You might be asking, why don’t the wastewater treatment plants filter the plastic? They actually  
 
You might be asking, why don’t the wastewater treatment plants filter the plastic? They actually  
 
 
do; however, microplastics are generally separated insufficiently, which is why they enter our  
 
do; however, microplastics are generally separated insufficiently, which is why they enter our  
 
 
natural environment. Consequently, they are taken up by many organisms, including the ones, to  
 
natural environment. Consequently, they are taken up by many organisms, including the ones, to  
 
 
malnutrition. Also, the uptake of microplastics by organisms causes mechanical injuries, as well  
 
malnutrition. Also, the uptake of microplastics by organisms causes mechanical injuries, as well  
 
 
as an obstruction of the digestive system. Toxic compounds, such as DEHP, could leach out  
 
as an obstruction of the digestive system. Toxic compounds, such as DEHP, could leach out  
 
 
from microplastics and affect the flora and fauna of rivers and seas. And even more  
 
from microplastics and affect the flora and fauna of rivers and seas. And even more  
 
 
importantly, microplastics can also affect human beings through the food chain.
 
importantly, microplastics can also affect human beings through the food chain.
 
 
A research group showed back in 2013 that one microplastic particle smaller than 1 mm can be  
 
A research group showed back in 2013 that one microplastic particle smaller than 1 mm can be  
 
 
found per 25 cm3 in depths that range from between about 1000 to 5000 meters. This is a very  
 
found per 25 cm3 in depths that range from between about 1000 to 5000 meters. This is a very  
 
+
disturbing fact because the microplastis have reached the very deep sea!<strong>[5] </strong> <br/> <br/>
disturbing fact because the microplastis have reached the very deep sea![5] </strong> <br/> <br/>
+
 
+
 
References: <br/>
 
References: <br/>
 
+
<strong>
[1] Converting Waste Plastics Into a  
+
[1] Converting Waste Plastics Into a Resource<br/>
 
+
<a href="http://www.unep.or.jp/Ietc/Publications/spc/WastePlasticsEST_Compendium.pdf">unep.or.jp</a>
Resource   <br/>
+
<br/>
 
+
 
[2]  Plastik als Umweltproblem! <br/>   
 
[2]  Plastik als Umweltproblem! <br/>   
 
+
<a href="http://www.plastic-planet.de/hintergrund_plastikalsproblem.html">plastic-planet.de</a> <br/>
http://www.plastic-planet.de/hintergrund_plastikalsproblem.html  <br/>
+
 
+
 
[3] How Long Does It Take a Plastic Bottle to Biodegrade? <br/>
 
[3] How Long Does It Take a Plastic Bottle to Biodegrade? <br/>
 
+
<a href="http://www.postconsumers.com/education/how-long-does-it-take-a-plastic-bottle-to-
http://www.postconsumers.com/education/how-long-does-it-take-a-plastic-bottle-to-
+
biodegrade/">postconsumers.com</a>  <br/>
 
+
biodegrade/ <br/>
+
 
+
 
[4] Converting Waste Plastic to Ultra-Clean, Ultra-Low Sulphur Fuel  <br/>
 
[4] Converting Waste Plastic to Ultra-Clean, Ultra-Low Sulphur Fuel  <br/>
 +
<a href="http://www.plastic2oil.com/site/home">plastic2oil.com</a>    <br/> 
 +
[5] Microplastic pollution in deep-sea sediments  <br/> 
 +
<a href="http://www.sciencedirect.com/science/article/pii/S0269749113004387">sciencedirect.com</a>
 +
<br/><br/><br/>
 +
</strong>
 +
<h5>WDR Movie</h5>
 +
<a href="http://www.planet-wissen.de/av/videoplastikzersetzenmithilfeeinesbiofilters100.html"><img style="max-height:1300px; max-width:650px;" src="https://static.igem.org/mediawiki/2015/8/8a/Team_Berlin_Movie.png"/></a><br/>
 +
<a href="http://www.planet-wissen.de/av/videoplastikzersetzenmithilfeeinesbiofilters100.html">Link: WDR Movie</a><br/><br/>
  
http://www.plastic2oil.com/site/home  <br/>
+
<h5>Transcript of the short documentary about our scientific exercise on WDR-Planet Wissen<br/></h5>
 +
Plastic – a problematic issue for our environment. Every year up to 13 million tons get into the seas. Plastic is present everywhere, not alone as packaging, but also in care products, like peelings or shower gels. It, then, gets through the wastewater into the environment as so called microplastic. The problem: These small particles cannot be fully filtered out even in the wastewater treatment plant. This is what Johann Bauerfeind and his team of the TU Berlin want to change. “We want to construct something like a filtering unit, which cannot only filter microplastics, but also, at the same time can degrade them. Therefore, afterwards, we won’t have the problem that the microplastics are still present, but they will be degraded into their compositions and these can be used by the environment. The aim is to make this students’ dream to change the world somehow come true sometime. And also to make a big project out of a small one which, then, can contribute to the fact that we will maybe have less plastic in our seas.” No easy task for the biotechnology student and his allies. For they fight against an almost invisible fiend. The plastic particles are often smaller than 1 mm. This shouldn’t be a problem for their filter, though. But at which point does this filter work best in a wastewater treatment plant? The biohacker favor the last tank. “Here, the large-sized trash has been removed already, and the stream is not very strong, which means that our filter will fit in best here, because the conditions go easy on it and it can stay active.” Back in the lab Mariam Hammoud and her comrades work further on the development of the filter – a complex system. “Our filter consists of three parts: The first part is the cellulose, which you can imagine as a piece of paper. To the cellulose, hair-like structures, called flagellas, will be bound. Enzymes which degrade microplastics are, then, attached to the flagellas.” To construct their filter, the students use a sort of biological machine. The basis for that can be found in these small chambers, so called biobricks: DNA sections that can be, for instance, applied in bacteria. “We let the bacteria work for us by bringing DNA into them which the bacteria can, then, use to produce for us, what we need.” The biohackers need enzymes that degrade microplastics. To interfere in biological processes and to influence these – a task that fascinates the students. “Because it is possible to somehow implement the idea in your head which is completely abstract. And to see by means of analyzing methods that we have actually moved something on molecular level and have built things.. this is really dope.”
  
[5] Microplastic pollution in deep-sea sediments  <br/> 
 
 
http://www.sciencedirect.com/science/article/pii/S0269749113004387</strong><br/>
 
 
      </p>
 
      </p>
 
      <br/>
 
      <br/>
      <iframe src="//player.vimeo.com/video/139496925" width="700" height="394" frameborder="0" webkitallowfullscreen mozallowfullscreen allowfullscreen></iframe>
+
    <br/>
      <br/>
+
 
      <br/>
+
      <br/>
+
      <br/>
+
 
    </div>
 
    </div>
 
  </div>     
 
  </div>     

Latest revision as of 23:08, 18 September 2015

Project

This year’s iGEM project of the Berlin team is all about plastic - to be specific: microplastic and the clearance of our water with the aid of Synthetic Biology.
The idea is to build a modular filter system for wastewater treatment plants which is able to degrade plastic. Bacterial flagella, moleculare hair-like structures, are equipped with a combination of enzymes that are able to breakdown plastic molecules.




1. What's the problem?

  Plastic is an environmentally harmful organic polymer that is present everywhere. The production of plastic material often results in the release of CO2, which exacerbates the Greenhouse effect. Within the last five decades, global plastic consumption rose from 5 to 100 million tons per year.[1]

Most of this consumption is completely unnecessary and a waste of valuable resources, such as the 600 billion plastic bags that are being redundantly produced annually. Additionally, there is no integrated solid waste management, meaning that plastic waste is neither collected properly nor disposed of in an appropriate manner to avoid the negative impacts on the environment and public health. A good example of this is that out of the produced 14 million tons of Styrofoam only 1% is recycled every year![2]

The massive amount of plastic waste that remains unrecycled partly ends up in the oceans. There, it accumulates through two underwater vortexes. One of these plastic accumulations is as big as central Europe and is called “Great Pacific Garbage Patch.” The main problem with this is that plastic cannot be degraded like natural resources. It is very durable and its decomposition can take up to 1000 years.[3]

Plastics can be divided into macro- (> 5 mm in diameter) and microplastics (≤ 5 mm in diameter), each of which require different approaches for applications. Macroplastics can be found in plastic bags, bottles, car materials, etc. Microplastics, on the other hand, are present in various everyday products, like peelings and creams, and find their way into the wastewater treatment plants through bathroom drains, and house and industrial sewage. Research is already underway to develop some new techniques to convert macroplastics into fuels without harming the environment. This offers a very promising approach, as the plastic can serve for the production of resources that are in high demand.[4]

As for treating microplastics, iGEM Berlin 2015 is constructing a modular filtering machine which can be applied in wastewater treatment plants to degrade microplastics in biodegradable compounds. You might be asking, why don’t the wastewater treatment plants filter the plastic? They actually do; however, microplastics are generally separated insufficiently, which is why they enter our natural environment. Consequently, they are taken up by many organisms, including the ones, to malnutrition. Also, the uptake of microplastics by organisms causes mechanical injuries, as well as an obstruction of the digestive system. Toxic compounds, such as DEHP, could leach out from microplastics and affect the flora and fauna of rivers and seas. And even more importantly, microplastics can also affect human beings through the food chain. A research group showed back in 2013 that one microplastic particle smaller than 1 mm can be found per 25 cm3 in depths that range from between about 1000 to 5000 meters. This is a very disturbing fact because the microplastis have reached the very deep sea![5]

References:
[1] Converting Waste Plastics Into a Resource
unep.or.jp
[2] Plastik als Umweltproblem!
plastic-planet.de
[3] How Long Does It Take a Plastic Bottle to Biodegrade?
postconsumers.com
[4] Converting Waste Plastic to Ultra-Clean, Ultra-Low Sulphur Fuel
plastic2oil.com
[5] Microplastic pollution in deep-sea sediments
sciencedirect.com


WDR Movie

Link: WDR Movie

Transcript of the short documentary about our scientific exercise on WDR-Planet Wissen
Plastic – a problematic issue for our environment. Every year up to 13 million tons get into the seas. Plastic is present everywhere, not alone as packaging, but also in care products, like peelings or shower gels. It, then, gets through the wastewater into the environment as so called microplastic. The problem: These small particles cannot be fully filtered out even in the wastewater treatment plant. This is what Johann Bauerfeind and his team of the TU Berlin want to change. “We want to construct something like a filtering unit, which cannot only filter microplastics, but also, at the same time can degrade them. Therefore, afterwards, we won’t have the problem that the microplastics are still present, but they will be degraded into their compositions and these can be used by the environment. The aim is to make this students’ dream to change the world somehow come true sometime. And also to make a big project out of a small one which, then, can contribute to the fact that we will maybe have less plastic in our seas.” No easy task for the biotechnology student and his allies. For they fight against an almost invisible fiend. The plastic particles are often smaller than 1 mm. This shouldn’t be a problem for their filter, though. But at which point does this filter work best in a wastewater treatment plant? The biohacker favor the last tank. “Here, the large-sized trash has been removed already, and the stream is not very strong, which means that our filter will fit in best here, because the conditions go easy on it and it can stay active.” Back in the lab Mariam Hammoud and her comrades work further on the development of the filter – a complex system. “Our filter consists of three parts: The first part is the cellulose, which you can imagine as a piece of paper. To the cellulose, hair-like structures, called flagellas, will be bound. Enzymes which degrade microplastics are, then, attached to the flagellas.” To construct their filter, the students use a sort of biological machine. The basis for that can be found in these small chambers, so called biobricks: DNA sections that can be, for instance, applied in bacteria. “We let the bacteria work for us by bringing DNA into them which the bacteria can, then, use to produce for us, what we need.” The biohackers need enzymes that degrade microplastics. To interfere in biological processes and to influence these – a task that fascinates the students. “Because it is possible to somehow implement the idea in your head which is completely abstract. And to see by means of analyzing methods that we have actually moved something on molecular level and have built things.. this is really dope.”