Difference between revisions of "Team:Macquarie Australia/Parts"

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<title>Parts</title>
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<a href="https://2015.igem.org/Team:Macquarie_Australia">Home</a></td>
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<a href="https://2015.igem.org/Team:Macquarie_Australia/ProjectOverview">Project</a></td>
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<a href="https://2015.igem.org/Team:Macquarie_Australia/Modeling">Modelling</a></td>
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<a href="https://2015.igem.org/Team:Macquarie_Australia/PartsOverview">Parts</a></td>
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<a href="https://2015.igem.org/Team:Macquarie_Australia/Practices">Human Practices</a></td>
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<a href="https://2015.igem.org/Team:Macquarie_Australia/Team">Team</a></td>
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<a href="https://2015.igem.org/Team:Macquarie_Australia/Attributions">Attributions</a></td>
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<h2> Part Documentation</h2>
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<h2> Part Documentation</h2>
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<p>Each team will make new parts during iGEM and will submit them to the Registry of Standard Biological Parts. The iGEM software provides an easy way to present the parts your team has created. The <code>&lt;groupparts&gt;</code> tag (see below) will generate a table with all of the parts that your team adds to your team sandbox.</p>
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<p>Remember that the goal of proper part documentation is to describe and define a part, so that it can be used without needing to refer to the primary literature. Registry users in future years should be able to read your documentation and be able to use the part successfully. Also, you should provide proper references to acknowledge previous authors and to provide for users who wish to know more.</p>
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<p>We have designed and constructed 10 parts this year, 5 of which have been submitted to iGem HQ.</p>
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<h4>Note</h4>
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<p>Note that parts must be documented on the <a href="http://parts.igem.org/Main_Page"> Registry</a>. This page serves to <i>showcase</i> the parts you have made. Future teams and other users and are much more likely to find parts by looking in the Registry than by looking at your team wiki.</p>
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<h4>Adding parts to the registry</h4>
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<p><a href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K1640018">BBa_K1640018</a>, aka <b>ChlM</b>, is a part integral to our synthetic chlorophyll biosynthesis pathway, which we have redesigned from earlier submissions, and have functionally characterised. This part has been submitted, and we are claiming a silver medal for this part.</p>
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<p>You can add parts to the Registry at our <a href="http://parts.igem.org/Add_a_Part_to_the_Registry">Add a Part to the Registry</a> link.</p>
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<p>We encourage teams to start completing documentation for their parts on the Registry as soon as you have it available. The sooner you put up your parts, the better you will remember all the details about your parts. Remember, you don't need to send us the DNA sample before you create an entry for a part on the Registry. (However, you <b>do</b> need to send us the DNA sample before the Jamboree. If you don't send us a DNA sample of a part, that part will not be eligible for awards and medal criteria.)</p>
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<h4>What information do I need to start putting my parts on the Registry?</h4>
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<p>ChlM is incorporated into the Chlorophyll a biosynthesis pathway in operon 3 as illustrated in the following diagram.</p>
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<p>The information needed to initially create a part on the Registry is:</p>
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<br>
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<center><img src="https://static.igem.org/mediawiki/2015/9/98/MqAust_ProjectDesign_CBP.png" width=600px></center><br>
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<li>Part Name</li>
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<li>Part type</li>
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<li>Creator</li>
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<li>Sequence</li>
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<li>Short Description (60 characters on what the DNA does)</li>
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<li>Long Description (Longer description of what the DNA does)</li>
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<li>Design considerations</li>
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<p>We encourage you to put up much more information as you gather it. If you have images, plots, characterization data and other information, please also put it up on the part page.</p>
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<h4>Inspiration</h4>
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<p>Parts <a href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K1640008">BBa_K1640008</a>, <a href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K1640020">BBa_K1640020</a>, <a href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K1640006">BBa_K1640006</a> and <a href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K1640012">BBa_K1640012</a> (respectively <b>psbMZH</b>, <b>psbA</b>, <b>psbELJ</b>, and <b>psbQR</b>) are 4 of the 10 biobricks we have designed for synthetic production of <i>Chlamydomonas reinhardtii</i>'s photosystem II complex. These 4 parts have been submitted to iGem HQ and we are claiming our bronze medal for these new submissions.</p>
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<p>We have a created  a <a href="http://parts.igem.org/Well_Documented_Parts">collection of well documented parts</a> that can help you get started.</p>
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<p>These photosystem II biobricks are incorporated into the photosystem II biosynthesis pathway as illustrated in the following diagram.</p>
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<p> You can also take a look at how other teams have documented their parts in their wiki:</p>
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<br><center><img src="https://static.igem.org/mediawiki/2015/1/14/MqAust_ProjectDesign_PSB.png" width="600px" alt="PSII diagram"></center><br>
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<ul>
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<li><a href="https://2014.igem.org/Team:MIT/Parts"> 2014 MIT </a></li>
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<li><a href="https://2014.igem.org/Team:Heidelberg/Parts"> 2014 Heidelberg</a></li>
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<li><a href="https://2014.igem.org/Team:Tokyo_Tech/Parts">2014 Tokyo Tech</a></li>
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<h4>Part Table </h4>
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<h4>Part Table</h4>
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<groupparts>iGEM2015 Example</groupparts>
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</html><groupparts>iGEM015 Macquarie_Australia</groupparts><html>
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Latest revision as of 12:47, 19 November 2015

Parts

Part Documentation

We have designed and constructed 10 parts this year, 5 of which have been submitted to iGem HQ.

BBa_K1640018, aka ChlM, is a part integral to our synthetic chlorophyll biosynthesis pathway, which we have redesigned from earlier submissions, and have functionally characterised. This part has been submitted, and we are claiming a silver medal for this part.

ChlM is incorporated into the Chlorophyll a biosynthesis pathway in operon 3 as illustrated in the following diagram.



Parts BBa_K1640008, BBa_K1640020, BBa_K1640006 and BBa_K1640012 (respectively psbMZH, psbA, psbELJ, and psbQR) are 4 of the 10 biobricks we have designed for synthetic production of Chlamydomonas reinhardtii's photosystem II complex. These 4 parts have been submitted to iGem HQ and we are claiming our bronze medal for these new submissions.

These photosystem II biobricks are incorporated into the photosystem II biosynthesis pathway as illustrated in the following diagram.


PSII diagram

Part Table

<groupparts>iGEM015 Macquarie_Australia</groupparts>