Difference between revisions of "Team:UT-Tokyo"

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    <head>
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      <meta name='viewport' content='width=device-width, initial-scale=1, user-scalable=no'>
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      <link href='http://fonts.googleapis.com/css?family=Homenaje&subset=latin,latin-ext' rel='stylesheet' type='text/css'>
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      <link href='http://fonts.googleapis.com/css?family=Open+Sans:300italic,400italic,700italic,700,300,400&subset=latin,cyrillic-ext' rel='stylesheet' type='text/css'>
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<link rel="stylesheet" type="text/css"
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href="https://2015.igem.org/Template:UT-Tokyo/CSS?action=raw&ctype=text/css" />
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    <script src="https://2015.igem.org/common/MathJax-2.5-latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML">
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      <!--script type="text/javascript" src="./js/jaxconfig.js"-->
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      </script>
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    </head>
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    <body>
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      <nav class='menu-panel'>
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        <ul>
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          <li>PRO
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            <ol>
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              <a style='background-image:url(./images/project.png)' href='project.html'></a>
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              <a href='project.html#introduction'>INTRO</a>
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              <a href='project.html#strategy'>STRATEGY</a>
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              <a href='project.html#system'>SYSTEM</a>
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              <a href='project.html#result'>RESULT</a>
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              <a href='project.html#application'>APPLICATION</a>
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            </ol>
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          </li>
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          <li>MOD
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            <ol>
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              <a style='background-image:url(./images/modeling.png)' href='modeling.html'></a>
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              <a href='modeling.html#top'>TOP</a>
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              <a href='modeling.html#ahlecoli'>AHL-E.Coli</a>
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              <a href='modeling.html#colicin'>COLICIN</a>
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              <a href='modeling.html#ahlt7'>AHL-T7</a>
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              <a href='modeling.html#parameters'>PARAMS</a>
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            </ol>
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          </li>
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          <li>EXP
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            <ol>
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              <a style='background-image:url(./images/experiment.png)' href='experiment.html'></a>
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              <a href='experiment.html#parts'>PARTS</a>
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              <a href='experiment.html#protocol'>PROTOCOL</a>
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              <a href='experiment.html#notebook'>NOTEBOOK</a>
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              <a href='experiment.html#safety'>SAFETY</a>
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            </ol>
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          </li>
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          <li class='home'>
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              <a href='index.html'></a>
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          </li>
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          <li> PARTS
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            <ol>
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              <a style='background-image:url(./images/parts.png)' href='parts.html'></a>
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            </ol>
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          </li>
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          <li>P&P
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            <ol>
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              <a style='background-image:url(./images/policyandpractice.png)' href='policyandpractice.html'></a>
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              <a href='policyandpractice.html#problem'>PROBLEM SOLVING</a>
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              <a href='policyandpractice.html#communication'>COMM</a>
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              <a href='policyandpractice.html#public'>PUBLIC PARTICI<br />PATION</a>
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            </ol>
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          </li>
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          <li>TEAM
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            <ol>
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              <a style='background-image:url(./images/team.png)' href='team.html'></a>
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            </ol>
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          </li>
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        </ul>
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      </nav>
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      <div class='main'>
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        <div class='grid home'>
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          <div class="grid-item grid-item--width4 grid-item--height4" >
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            <canvas width='296' height='296'></canvas>
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            <!--script src='js/pattern.js'></script-->
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            <!--div id='debug'></div-->
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            <div class='canvas-control'>
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              CONTROL
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              <div class='toggle-sw' onclick='onoff()'></div>
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              <div class='square-sw' onclick='flush()'></div>
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              <div class='square-sw' onclick='flush()'></div>
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            </div>
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          </div>
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          <div class="grid-item home">
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            <span style='background-image:url(./images/parts.png)'></span>
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            <ul>
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            <li><a href='project.html#introduction'>Introduction<p>this is overviw. write description here.</p></a></li>
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            <li><a href='project.html#system'>System<p>this is system. write description here.</p></a></li>
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            <li><a href='project.html#result'>Result<p>this is result. write description here.</p></a></li>
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            <li><a href='project.html#application'>Application<p>this is application. write description here.</p></a></li>
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            </ul>
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          </div>
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          <div class="grid-item home">
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            <span style='background-image:url(./images/policyandpractice.png)'></span>
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            <ul>
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            <li><a href='policyandpractice.html#problem'>Problem Solving<p>Have you ever thought about Intellectual Property Rights?</p></a></li>
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            <li><a href='policyandpractice.html#communication'>Communication<p>write description here.</p></a></li>
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            <li><a href='policyandpractice.html#public'>Public <br /> Participation<p>write description here.</p></a></li>
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            </ul>
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          </div>
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          <div class="grid-item home">
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            <span style='background-image:url(./images/team.png)'></span>
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            <ul>
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            <li><a href='team.html'>Team<p>write description here.</p></a></li>
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            </ul>
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          </div>
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          <div class="grid-item grid-item--width2 grid-item--height2 home">
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            <span style='background-image:url(./images/modeling.png)'></span>
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            <ul>
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            <li><a href='project.html#top'>Top<p>this is overviw. write description here.</p></a></li>
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            <li><a href='project.html#ahlecoli'>AHL-E.Coli<p>write description here.</p></a></li>
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            <li><a href='project.html#colicin'>Colicin<p>write description here.</p></a></li>
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            <li><a href='project.html#ahlt7'>AHL-T7<p>write description here.</p></a></li>
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            <li><a href='project.html#parameters'>Parameters<p>write description here.</p></a></li>
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            </ul>
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          </div>
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          <div class="grid-item grid-item--width2 grid-item--height2 home">
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            <span style='background-image:url(./images/experiment.png)'></span>
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            <ul>
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            <li><a href='project.html#parts'>Parts<p>write description here.</p></a></li>
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            <li><a href='project.html#protocol'>Protocol<p>write description here.</p></a></li>
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            <li><a href='project.html#result'>Result<p>write description here.</p></a></li>
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            <li><a href='project.html#safety'>Safety<p>write description here.</p></a></li>
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            </ul>
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          </div>
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          <div class="grid-item grid-item--width3 grid-item--height3 home">
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            <span style='background-image:url(./images/project.png)'></span>
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            <ul>
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            <li><a href='project.html#introduction'>Introduction
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              <p>
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                Project Overview<br />
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                Turing Mechanism<br />
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                Advantage Of Synthetic Biological Approach<br />
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              </p>
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            </a></li>
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            <li><a href='project.html#strategy'>Strategy
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              <p>
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                Strategy 1<br />
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                Strategy 2<br />
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                Strategy 3<br />
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              </p>
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            </a></li>
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            <li><a href='project.html#system'>System
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              <p>
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                Motility Cntrol<br />
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                Cell-Cell Interaction<br />
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                Construction<br />
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              </p>
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            </a></li>
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            <li><a href='project.html#result'>Result<p>this is result. write description here.</p></a></li>
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            <li><a href='project.html#application'>Application<p>this is application. write description here.</p></a></li>
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            </ul>
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          </div>
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        </div>
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        <div class='panel'>
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          <h2>PROJECT DESCRIPTION</h2>
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          <p>
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            How do Zebrafish get their stripes? Why do we have only 5 digits on each hand?
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          </p>
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          <p>
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          Here's one possible answer: Turing Pattern.
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          </p>
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          <p>
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          Turing Pattern is a type of spatial pattern suggested by the British mathematician <span>Alan Turing
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            <q>Alan Turing(1912-1954)<br>A British mathetician. Famous for contribution to computer science.</q></span>.
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          He proposed that these patterns could be created by the network of two chemicals which have different diffusion rate. These two molecules are called the activator and inhibitor.
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          </p>
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          <p>
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          Because of its simplicity, the theory has attracted scientist in many fields, and thus various research has been carried out in the last 60 years.
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          However, it was not easy to prove directly if those patterns are produced by the reaction-diffusion systems or another mechanism.
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          Living systems are so complex that most research was exclusively theoretical. Biologists still face a big problem: identification of proper molecules acting as activator and inhibitor.
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          </p>
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          <p>
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          We therefore reconstructed a Turing system using two advantages of synthetic biology; controllability and biological directness.
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          By letting whole <i>E. Coli</i> cells, whose motility were controlled, communicate with each other, we succeeded in making the whole system work more identically than any previous researches.
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          This project should surely be a great step for understanding more about morphology and some other related fields of science.
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          Now, the new door of synthetic biology has opened and awaits you to come in!
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          </p>
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        </div>
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          <h2>WIKI EDITTING</h2>
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          1. Normal Text<br />
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          &ltp>Normal Text&lt/p> : <br />Normal Text<br />
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          2. Headline
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          <br />
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          &lth2>Headline&lt/h2> : </p><h2>Headline</h2>
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          <p>
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          3. Line Break<br />
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          &ltp>Line&ltbr />Break&lt/p> : Line <br /> Break<br />
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          4. Additional Information<br />
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          &ltp>&ltspan>Addtional information&ltq>THIS IS Additional information!&lt/q>&lt/span>&lt/p> :
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          <span>Additional information<q>THIS IS Additional information!</q></span><br />
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          Move your cursor over the text and find what happens.<br />
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          5. Pictures<br />
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          &ltimg src='./images/project.png' width='100' height='100' align='left'> : <img src='./images/project.png' width='100' height='100' align='left'><br />
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          <br /><br /><br /><br />
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          6. MathJax(LaTeX)<br />
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          <q>$\sum_{n=1}^\infty \frac{1}{n^2} = \frac{\pi^2}{6}$</q> : $ \sum_{n=1}^\infty \frac{1}{n^2} = \frac{\pi^2}{6} $ <br />
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          <q>$$\sum_{n=1}^\infty \frac{1}{n^2} = \frac{\pi^2}{6}$$</q> : $$ \sum_{n=1}^\infty \frac{1}{n^2} = \frac{\pi^2}{6} $$
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          </p>
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        </div>
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      </div>
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    </body>
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    <!--script type="text/javascript" src="http://ajax.googleapis.com/ajax/libs/jquery/1.11.1/jquery.min.js"></script>
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    <script type='text/javascript' src='./js/isotope.pkgd.js'></script>
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    <script type='text/javascript' src='./js/main.js'></script-->
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<script type="text/javascript" src="https://2015.igem.org/Template:UT-Tokyo/Javascript?
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action=raw&ctype=text/javascript"></script>
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</html>
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<!--html>
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<h2> Welcome to iGEM 2015! </h2>
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<p>Your team has been approved and you are ready to start the iGEM season! </p>
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<h4>Before you start: </h4>
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<p> Please read the following pages:</p>
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<ul>
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<li>  <a href="https://2015.igem.org/Requirements">Requirements page </a> </li>
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<li> <a href="https://2015.igem.org/Wiki_How-To">Wiki Requirements page</a></li>
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</ul>
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<div class="highlightBox">
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<h2>PROJECT DISCRIPTION</h2>
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<p>How do Zebrafish get their stripes? Why do we have only 5 digits on each hand?
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<br />
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Here's one possible answer: Turing Pattern.
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<br />
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Turing Pattern is a type of spatial pattern suggested by the British mathematician Alan Turing. He proposed that these patterns could be created by the network of two chemicals which have different diffusion rate. These two molecules are called the activator and inhibitor.
+
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<br />
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Because of its simplicity, the theory has attracted scientist in many fields, and thus various research has been carried out in the last 60 years. However, it was not easy to prove directly if those patterns are produced by the reaction-diffusion systems or another mechanism. Living systems are so complex that most research was exclusively theoretical. Biologists still face a big problem: identification of proper molecules acting as activator and inhibitor.
+
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<br />
+
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We therefore reconstructed a Turing system using two advantages of synthetic biology; controllability and biological directness. By letting whole E. coli cells, whose motility were controlled, communicate with each other, we succeeded in making the whole system work more identically than any previous researches. This project should surely be a great step for understanding more about morphology and some other related fields of science. Now, the new door of synthetic biology has opened and awaits you to come in!
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</p>
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<h4> Styling your wiki </h4>
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<p>You may style this page as you like or you can simply leave the style as it is. You can easily keep the styling and edit the content of these default wiki pages with your project information and completely fulfill the requirement to document your project.</p>
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<p>While you may not win Best Wiki with this styling, your team is still eligible for all other awards. This default wiki meets the requirements, it improves navigability and ease of use for visitors, and you should not feel it is necessary to style beyond what has been provided.</p>
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</div>
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<h4> Editing your wiki </h4>
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<p>On this page you can document your project, introduce your team members, document your progress and share your iGEM experience with the rest of the world! </p>
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<p> <a href="https://2015.igem.org/wiki/index.php?title=Team:UT-Tokyo&action=edit"> Click here to edit this page! </a></p>
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<p>See tips on how to edit your wiki on the <a href="https://2015.igem.org/TemplatesforTeams_Code_Documentation">Template Documentation</a> page.</p>
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<h4>Templates </h4>
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<p> This year we have created templates for teams to use freely. More information on how to use and edit the templates can be found on the
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<a href="https://2015.igem.org/TemplatesforTeams_Code_Documentation">Template Documentation </a> page.</p>
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<h4>Tips</h4>
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<p>This wiki will be your team’s first interaction with the rest of the world, so here are a few tips to help you get started: </p>
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<ul>
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<li>State your accomplishments! Tell people what you have achieved from the start. </li>
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<li>Be clear about what you are doing and how you plan to do this.</li>
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<li>You have a global audience! Consider the different backgrounds that your users come from.</li>
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<li>Make sure information is easy to find; nothing should be more than 3 clicks away.  </li>
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<li>Avoid using very small fonts and low contrast colors; information should be easy to read.  </li>
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<li>Start documenting your project as early as possible; don’t leave anything to the last minute before the Wiki Freeze. For a complete list of deadlines visit the <a href="https://2015.igem.org/Calendar_of_Events">iGEM 2015 calendar</a> </li>
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<li>Have lots of fun! </li>
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</ul>
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<h4>Inspiration</h4>
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<p> You can also view other team wikis for inspiration! Here are some examples:</p>
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<ul>
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<li> <a href="https://2014.igem.org/Team:SDU-Denmark/"> 2014 SDU Denmark </a> </li>
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<li> <a href="https://2014.igem.org/Team:Aalto-Helsinki">2014 Aalto-Helsinki</a> </li>
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<li> <a href="https://2014.igem.org/Team:LMU-Munich">2014 LMU-Munich</a> </li>
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<li> <a href="https://2014.igem.org/Team:Michigan"> 2014 Michigan</a></li>
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<li> <a href="https://2014.igem.org/Team:ITESM-Guadalajara">2014 ITESM-Guadalajara </a></li>
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<li> <a href="https://2014.igem.org/Team:SCU-China"> 2014 SCU-China </a></li>
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</ul>
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<h4> Uploading pictures and files </h4>
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<p> You can upload your pictures and files to the iGEM 2015 server. Remember to keep all your pictures and files within your team's namespace or at least include your team's name in the file name. <br />
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When you upload, set the "Destination Filename" to <code>Team:YourOfficialTeamName/NameOfFile.jpg</code>. (If you don't do this, someone else might upload a different file with the same "Destination Filename", and your file would be erased!)</p>
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<a href="https://2015.igem.org/Special:Upload">CLICK HERE TO UPLOAD FILES</a>
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</div></div>
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</html-->
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Revision as of 07:07, 26 August 2015