Difference between revisions of "Team:Waterloo"
m (Abstract) |
|||
Line 10: | Line 10: | ||
</div> | </div> | ||
<div class="col-sm-6"> | <div class="col-sm-6"> | ||
− | + | <img src="/wiki/images/1/1c/Waterloo_crispier_logo.png" alt="Example Image" class="img-responsive"/> | |
− | + | ||
</div> | </div> | ||
</div> | </div> |
Revision as of 23:41, 13 September 2015
Engineered PAM Flexibility
Swappable sgRNA Targets
Antiviral Protection for Plants
CRISPR-Cas9 is an exciting tool for synthetic biologists because it can target and edit genomes with unprecedented specificity. Our team is attempting to re-engineer CRISPR to make it more flexible and easier to use.
We’re making it easy to test different sgRNA designs: restriction sites added to the sgRNA backbone allow 20 nucleotide target sequences to be swapped without excessive cloning.
Additionally, we’re applying recent research on viable mutations within Cas9’s PAM-interacting domain to design (d)Cas9 variants that bind to novel PAM sites, moving towards the goal of a suite of variants that can bind any desired sequence. We believe our re-engineered CRISPR-Cas9 will give biologists increased ability to optimize targeting in many applications.
The application we chose to explore is a proof-of-concept antiviral system defending the model plant Arabidopsis thaliana against Cauliflower Mosaic Virus, which would benefit from testing a large number of possible sgRNAs in the viral genome.
Before you start:
Please read the following pages:
Styling your wiki
You may style this page as you like or you can simply leave the style as it is. You can easily keep the styling and edit the content of these default wiki pages with your project information and completely fulfill the requirement to document your project.
While you may not win Best Wiki with this styling, your team is still eligible for all other awards. This default wiki meets the requirements, it improves navigability and ease of use for visitors, and you should not feel it is necessary to style beyond what has been provided.
Editing your wiki
On this page you can document your project, introduce your team members, document your progress and share your iGEM experience with the rest of the world!
See tips on how to edit your wiki on the Template Documentation page.
Templates
This year we have created templates for teams to use freely. More information on how to use and edit the templates can be found on the Template Documentation page.
Tips
This wiki will be your team’s first interaction with the rest of the world, so here are a few tips to help you get started:
- State your accomplishments! Tell people what you have achieved from the start.
- Be clear about what you are doing and how you plan to do this.
- You have a global audience! Consider the different backgrounds that your users come from.
- Make sure information is easy to find; nothing should be more than 3 clicks away.
- Avoid using very small fonts and low contrast colors; information should be easy to read.
- Start documenting your project as early as possible; don’t leave anything to the last minute before the Wiki Freeze. For a complete list of deadlines visit the iGEM 2015 calendar
- Have lots of fun!
Inspiration
You can also view other team wikis for inspiration! Here are some examples:
- 2014 SDU Denmark
- 2014 Aalto-Helsinki
- 2014 LMU-Munich
- 2014 Michigan
- 2014 ITESM-Guadalajara
- 2014 SCU-China
Uploading pictures and files
You can upload your pictures and files to the iGEM 2015 server. Remember to keep all your pictures and files within your team's namespace or at least include your team's name in the file name.
When you upload, set the "Destination Filename" to Team:YourOfficialTeamName/NameOfFile.jpg
. (If you don't do this, someone else might upload a different file with the same "Destination Filename", and your file would be erased!)