Team:KU Leuven/Modeling/Internal/Ultra/Test
Internal Model
X. Parameters
| Parameter | Value | Unit | Source | Comment |
|---|---|---|---|---|
| $D_a$ | $0.072 \cdot 10^{-3}$ | $cm^2/h$ | following [1] | |
| $D_b$ | $2.376 \cdot 10^{-3}$ | $cm^2/h$ | following [1] | |
| $D_r$ | $26.46 \cdot 10^{-3}$ | $cm^2/h$ | as found in [6] | $298.2 K$ |
| $D_h$ | $50 \cdot 10^{-3}$ | $cm^2/h$ | from [3] | |
| $K_{c}$ | $8.5 \cdot 10^{-3}$ | $cm^2/h$ | guessed | |
| $\gamma$ | $10^{-5}$ | $h^{-1}$ | from [1] | |
| $k_p$ | $1.0 \cdot 10^2$ | $cl^{-1}$ | from [1] | |
| $k_h$ | $17.9 \cdot 10^{-4}$ | $fmol/h$ | computed from [4] and [8] | |
| $k_r$ | $5.4199\cdot 10^{-4}$ | $fmol/h$ | computed from [7] and [8] | |
| $k_{lossH}$ | $1/48$ | $h^{-1}$ | from [5] | $ ph = 7$ |
| $k_{lossR}$ | $1/80$ | $h^{-1}$ | guessed |
| Protein | Translation rate (a.u.) | Translation rate (1/s) |
|---|---|---|
| LuxI | 261.13 | 0.016 |
| LuxR | 279.61 | 0.016 |
| cI857 | 5695.79 | 0.35 |
| Transaminase B | 2195.1 | 0.13 |
| Ag43-YFP | 33.22 | 0.0020 |
| PenI | 6696.73 | 0.41 |
| RFP | 2604.51 | 0.16 |
| CheZ-GFP | 396.95 | 0.024 |
