Difference between revisions of "Team:Freiburg/Project/Future Directions"
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Our project keeps many possible applications at hand if we will be able to further optimize the cell-free expression system and the specific binding to the surface for generating a protein chip. Improving the device towards a more quantitative method may allow medical professionals to determine the state of vaccination of a patient for a whole set of antigens, thus rendering some additional immunizations unnecessary. | Our project keeps many possible applications at hand if we will be able to further optimize the cell-free expression system and the specific binding to the surface for generating a protein chip. Improving the device towards a more quantitative method may allow medical professionals to determine the state of vaccination of a patient for a whole set of antigens, thus rendering some additional immunizations unnecessary. | ||
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− | With further work on the DiaCHIP it could also be possible to distinguish between vaccines from different manufactures by spotting different epitopes of one antigen on the slide. This offers the opportunity to determine, whether the patient is vaccinated against a certain type of a virus. For expample the Human Papilloma Virus (HPV) shows several subtypes (as HPV-16 and HPV-18 or HPV-11 and HPV-6) differing in the charactersitics of the disease. Knowing the vaccination status of a patient for these different subtypes could help to asses the personal risks for several diseases. | + | With further work on the DiaCHIP it could also be possible to distinguish between vaccines from different manufactures by spotting different epitopes of one antigen on the slide. This offers the opportunity to determine, whether the patient is vaccinated against a certain type of a virus. For expample the Human Papilloma Virus (HPV) shows several subtypes (as HPV-16 and HPV-18 or HPV-11 and HPV-6) differing in the charactersitics of the disease. Knowing the vaccination status of a patient for these different subtypes could help to asses the personal risks for several diseases <sup><a class="fn_top" href="#fn__1" id="fnt__1" name="fnt__1">1)</a></sup> . |
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In the same way blood samples from blood banks or blood donations can be checked. And as the volume needed is very small checks can be performed in short-time intervals and nearly continuos monitoring of blood-quality may be possible. | In the same way blood samples from blood banks or blood donations can be checked. And as the volume needed is very small checks can be performed in short-time intervals and nearly continuos monitoring of blood-quality may be possible. | ||
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<a class="media" href="https://static.igem.org/mediawiki/2015/4/43/Freiburg_labjournal-cloning-banked_blood.png" title="labjournal:cloning:banked_blood.png"><img align="right" alt="" class="mediaright" src="https://static.igem.org/mediawiki/2015/4/43/Freiburg_labjournal-cloning-banked_blood.png" width="200"/></a> | <a class="media" href="https://static.igem.org/mediawiki/2015/4/43/Freiburg_labjournal-cloning-banked_blood.png" title="labjournal:cloning:banked_blood.png"><img align="right" alt="" class="mediaright" src="https://static.igem.org/mediawiki/2015/4/43/Freiburg_labjournal-cloning-banked_blood.png" width="200"/></a> | ||
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Beyond fields of application in clinics as such, the suggested method of cell-free expression would simplify the preparation of protein microarrays on demand as no purification of protein is necessary anymore. This could be a major advantage in scientific research as handling and storage of protein arrays still poses some challenges. With our system of cell-free expression the production of protein arrays could provide an easy method to work with freshly produced protein chips. | Beyond fields of application in clinics as such, the suggested method of cell-free expression would simplify the preparation of protein microarrays on demand as no purification of protein is necessary anymore. This could be a major advantage in scientific research as handling and storage of protein arrays still poses some challenges. With our system of cell-free expression the production of protein arrays could provide an easy method to work with freshly produced protein chips. | ||
As cDNA labraries are a common tool in basic research, combined with cell-free expression and immobilization on the glass slide, screenings for potential interacting proteins can be facilitated and improved through multiplexing applications. | As cDNA labraries are a common tool in basic research, combined with cell-free expression and immobilization on the glass slide, screenings for potential interacting proteins can be facilitated and improved through multiplexing applications. | ||
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+ | <div class="fn"><sup><a class="fn_bot" href="#fnt__1" id="fn__1" name="fn__1">1)</a></sup> | ||
+ | <a class="urlextern" href="http://www.cancer.gov/about-cancer/causes-prevention/risk/infectious-agents/hpv-vaccine-fact-sheet" rel="nofollow" target="_Blank" title="http://www.cancer.gov/about-cancer/causes-prevention/risk/infectious-agents/hpv-vaccine-fact-sheet">HPV vaccine fact sheet</a></div> | ||
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Revision as of 09:53, 10 September 2015
Future Direction
Hab mal dran gebastelt -> bitte korrigieren! (jb 20150909)
Our project keeps many possible applications at hand if we will be able to further optimize the cell-free expression system and the specific binding to the surface for generating a protein chip. Improving the device towards a more quantitative method may allow medical professionals to determine the state of vaccination of a patient for a whole set of antigens, thus rendering some additional immunizations unnecessary.
The DiaCHIP could provide a tool for accurate analysis of the antibody titer of a person, thus helping to keep up a constant protection against many diseases. As the iRIf technology only detects binding on the surface it is not possible to directly differentiate between existing antibodies due to an infection in the past or fresh antibodies resulting from an acute infection or a vaccination. A possible approach for dealing with this issue is the labeling of bound antibodies with proteins specific for one type of antibody, past infection related IgG or vaccination related IgM. Protein A may be such a candidate as it specifically binds to IgG but not to IgM. Additionally conventional secondary antibodies against both of these types may be used to cross-validate the results and adding an additional layer of reliablility to the test. With further work on the DiaCHIP it could also be possible to distinguish between vaccines from different manufactures by spotting different epitopes of one antigen on the slide. This offers the opportunity to determine, whether the patient is vaccinated against a certain type of a virus. For expample the Human Papilloma Virus (HPV) shows several subtypes (as HPV-16 and HPV-18 or HPV-11 and HPV-6) differing in the charactersitics of the disease. Knowing the vaccination status of a patient for these different subtypes could help to asses the personal risks for several diseases 1) . The DiaChip could also be used for pre-pregnancy test, where evaluation of the antibody titers against certain diseases like e.g. rubella or whooping cough is crucial. Here the safety of the unborn child relies on the health status of the mother, therefore missing vaccinations should be detected before considering a pregnancy. With our chip this may be a matter of one drop of blood and a test of two to three hours including the expression of antigens on the slide. In the same way blood samples from blood banks or blood donations can be checked. And as the volume needed is very small checks can be performed in short-time intervals and nearly continuos monitoring of blood-quality may be possible.
Beyond fields of application in clinics as such, the suggested method of cell-free expression would simplify the preparation of protein microarrays on demand as no purification of protein is necessary anymore. This could be a major advantage in scientific research as handling and storage of protein arrays still poses some challenges. With our system of cell-free expression the production of protein arrays could provide an easy method to work with freshly produced protein chips. As cDNA labraries are a common tool in basic research, combined with cell-free expression and immobilization on the glass slide, screenings for potential interacting proteins can be facilitated and improved through multiplexing applications. In our iGEM project we were able to detect two diseases (Tetanus and Salmonella), but these are just two out of 1000 diseases our DiaCHIP will hold.